Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G12500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051238: sequestering of metal ion0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
4GO:0010055: atrichoblast differentiation0.00E+00
5GO:0043201: response to leucine0.00E+00
6GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
7GO:0080052: response to histidine0.00E+00
8GO:0046109: uridine biosynthetic process0.00E+00
9GO:0080053: response to phenylalanine0.00E+00
10GO:0009620: response to fungus7.68E-08
11GO:0009817: defense response to fungus, incompatible interaction5.75E-06
12GO:0032491: detection of molecule of fungal origin1.10E-04
13GO:0032107: regulation of response to nutrient levels1.10E-04
14GO:0099132: ATP hydrolysis coupled cation transmembrane transport1.10E-04
15GO:0010726: positive regulation of hydrogen peroxide metabolic process1.10E-04
16GO:0009407: toxin catabolic process1.57E-04
17GO:0050832: defense response to fungus1.89E-04
18GO:0006468: protein phosphorylation2.00E-04
19GO:0042939: tripeptide transport2.57E-04
20GO:0060151: peroxisome localization2.57E-04
21GO:0080183: response to photooxidative stress2.57E-04
22GO:0051645: Golgi localization2.57E-04
23GO:0009866: induced systemic resistance, ethylene mediated signaling pathway2.57E-04
24GO:0002240: response to molecule of oomycetes origin2.57E-04
25GO:0043066: negative regulation of apoptotic process2.57E-04
26GO:0009636: response to toxic substance3.15E-04
27GO:0090436: leaf pavement cell development4.25E-04
28GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway4.25E-04
29GO:0051646: mitochondrion localization4.25E-04
30GO:0033169: histone H3-K9 demethylation6.10E-04
31GO:0070301: cellular response to hydrogen peroxide6.10E-04
32GO:0009052: pentose-phosphate shunt, non-oxidative branch6.10E-04
33GO:0009751: response to salicylic acid8.07E-04
34GO:0042938: dipeptide transport8.10E-04
35GO:0045227: capsule polysaccharide biosynthetic process8.10E-04
36GO:0033358: UDP-L-arabinose biosynthetic process8.10E-04
37GO:1901002: positive regulation of response to salt stress8.10E-04
38GO:0002238: response to molecule of fungal origin1.25E-03
39GO:0006561: proline biosynthetic process1.25E-03
40GO:0010942: positive regulation of cell death1.25E-03
41GO:0015691: cadmium ion transport1.25E-03
42GO:0007166: cell surface receptor signaling pathway1.45E-03
43GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.49E-03
44GO:0009617: response to bacterium1.53E-03
45GO:0008219: cell death1.61E-03
46GO:1900057: positive regulation of leaf senescence1.75E-03
47GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.75E-03
48GO:1900056: negative regulation of leaf senescence1.75E-03
49GO:0050829: defense response to Gram-negative bacterium1.75E-03
50GO:0010204: defense response signaling pathway, resistance gene-independent2.32E-03
51GO:0010120: camalexin biosynthetic process2.32E-03
52GO:0009821: alkaloid biosynthetic process2.62E-03
53GO:0006855: drug transmembrane transport3.04E-03
54GO:0009688: abscisic acid biosynthetic process3.25E-03
55GO:0042538: hyperosmotic salinity response3.27E-03
56GO:0009809: lignin biosynthetic process3.51E-03
57GO:0009682: induced systemic resistance3.59E-03
58GO:0006790: sulfur compound metabolic process3.93E-03
59GO:0002213: defense response to insect3.93E-03
60GO:0055046: microgametogenesis4.30E-03
61GO:0009718: anthocyanin-containing compound biosynthetic process4.30E-03
62GO:0030048: actin filament-based movement4.30E-03
63GO:0048467: gynoecium development4.66E-03
64GO:0002237: response to molecule of bacterial origin4.66E-03
65GO:0070588: calcium ion transmembrane transport5.04E-03
66GO:0046854: phosphatidylinositol phosphorylation5.04E-03
67GO:0009225: nucleotide-sugar metabolic process5.04E-03
68GO:0042742: defense response to bacterium5.69E-03
69GO:0005992: trehalose biosynthetic process5.84E-03
70GO:0006874: cellular calcium ion homeostasis6.25E-03
71GO:0016998: cell wall macromolecule catabolic process6.67E-03
72GO:0071456: cellular response to hypoxia7.11E-03
73GO:0010227: floral organ abscission7.55E-03
74GO:0006012: galactose metabolic process7.55E-03
75GO:0009561: megagametogenesis8.00E-03
76GO:0010150: leaf senescence8.60E-03
77GO:0006952: defense response8.90E-03
78GO:0006885: regulation of pH9.41E-03
79GO:0009611: response to wounding9.74E-03
80GO:0048544: recognition of pollen9.91E-03
81GO:0042752: regulation of circadian rhythm9.91E-03
82GO:0009851: auxin biosynthetic process1.04E-02
83GO:0006623: protein targeting to vacuole1.04E-02
84GO:0002229: defense response to oomycetes1.09E-02
85GO:0010090: trichome morphogenesis1.20E-02
86GO:0010252: auxin homeostasis1.25E-02
87GO:0006904: vesicle docking involved in exocytosis1.30E-02
88GO:0051607: defense response to virus1.36E-02
89GO:0009615: response to virus1.42E-02
90GO:0009607: response to biotic stimulus1.47E-02
91GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.47E-02
92GO:0009627: systemic acquired resistance1.53E-02
93GO:0030244: cellulose biosynthetic process1.71E-02
94GO:0010200: response to chitin1.71E-02
95GO:0048767: root hair elongation1.77E-02
96GO:0006499: N-terminal protein myristoylation1.83E-02
97GO:0007568: aging1.89E-02
98GO:0048527: lateral root development1.89E-02
99GO:0045087: innate immune response2.02E-02
100GO:0006869: lipid transport2.18E-02
101GO:0016310: phosphorylation2.20E-02
102GO:0006887: exocytosis2.29E-02
103GO:0032259: methylation2.34E-02
104GO:0009753: response to jasmonic acid2.63E-02
105GO:0006812: cation transport2.85E-02
106GO:0006813: potassium ion transport2.99E-02
107GO:0006857: oligopeptide transport3.14E-02
108GO:0042545: cell wall modification3.77E-02
109GO:0009058: biosynthetic process4.69E-02
RankGO TermAdjusted P value
1GO:0016614: oxidoreductase activity, acting on CH-OH group of donors7.86E-06
2GO:0016301: kinase activity6.80E-05
3GO:0009055: electron carrier activity1.46E-04
4GO:0008171: O-methyltransferase activity1.48E-04
5GO:0004364: glutathione transferase activity2.55E-04
6GO:0042937: tripeptide transporter activity2.57E-04
7GO:0032454: histone demethylase activity (H3-K9 specific)2.57E-04
8GO:0030742: GTP-dependent protein binding2.57E-04
9GO:0005524: ATP binding3.43E-04
10GO:0050660: flavin adenine dinucleotide binding4.09E-04
11GO:0004751: ribose-5-phosphate isomerase activity4.25E-04
12GO:0004383: guanylate cyclase activity4.25E-04
13GO:0042409: caffeoyl-CoA O-methyltransferase activity4.25E-04
14GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity4.25E-04
15GO:0050302: indole-3-acetaldehyde oxidase activity8.10E-04
16GO:0010279: indole-3-acetic acid amido synthetase activity8.10E-04
17GO:0009916: alternative oxidase activity8.10E-04
18GO:0050373: UDP-arabinose 4-epimerase activity8.10E-04
19GO:0042936: dipeptide transporter activity8.10E-04
20GO:0004031: aldehyde oxidase activity8.10E-04
21GO:0017137: Rab GTPase binding1.02E-03
22GO:0004866: endopeptidase inhibitor activity1.25E-03
23GO:0004723: calcium-dependent protein serine/threonine phosphatase activity1.49E-03
24GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.49E-03
25GO:0003978: UDP-glucose 4-epimerase activity1.49E-03
26GO:0015238: drug transmembrane transporter activity1.69E-03
27GO:0030145: manganese ion binding1.86E-03
28GO:0004674: protein serine/threonine kinase activity2.24E-03
29GO:0051537: 2 iron, 2 sulfur cluster binding2.82E-03
30GO:0031490: chromatin DNA binding2.93E-03
31GO:0016844: strictosidine synthase activity2.93E-03
32GO:0005516: calmodulin binding3.63E-03
33GO:0000976: transcription regulatory region sequence-specific DNA binding3.93E-03
34GO:0045735: nutrient reservoir activity4.14E-03
35GO:0004022: alcohol dehydrogenase (NAD) activity4.30E-03
36GO:0005388: calcium-transporting ATPase activity4.30E-03
37GO:0003774: motor activity4.66E-03
38GO:0004970: ionotropic glutamate receptor activity5.04E-03
39GO:0004867: serine-type endopeptidase inhibitor activity5.04E-03
40GO:0005217: intracellular ligand-gated ion channel activity5.04E-03
41GO:0015035: protein disulfide oxidoreductase activity5.13E-03
42GO:0001046: core promoter sequence-specific DNA binding5.84E-03
43GO:0004675: transmembrane receptor protein serine/threonine kinase activity8.01E-03
44GO:0015297: antiporter activity8.20E-03
45GO:0005451: monovalent cation:proton antiporter activity8.93E-03
46GO:0015299: solute:proton antiporter activity9.91E-03
47GO:0019901: protein kinase binding1.04E-02
48GO:0015385: sodium:proton antiporter activity1.20E-02
49GO:0030247: polysaccharide binding1.59E-02
50GO:0052689: carboxylic ester hydrolase activity1.83E-02
51GO:0005509: calcium ion binding2.09E-02
52GO:0005215: transporter activity2.62E-02
53GO:0016298: lipase activity3.07E-02
54GO:0045330: aspartyl esterase activity3.22E-02
55GO:0008289: lipid binding3.40E-02
56GO:0080043: quercetin 3-O-glucosyltransferase activity3.61E-02
57GO:0080044: quercetin 7-O-glucosyltransferase activity3.61E-02
58GO:0030599: pectinesterase activity3.69E-02
59GO:0004672: protein kinase activity3.73E-02
60GO:0003779: actin binding3.77E-02
61GO:0004252: serine-type endopeptidase activity4.86E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane6.59E-05
2GO:0005886: plasma membrane2.24E-04
3GO:0070062: extracellular exosome6.10E-04
4GO:0005770: late endosome7.18E-04
5GO:0016459: myosin complex3.25E-03
6GO:0005576: extracellular region3.56E-03
7GO:0005618: cell wall4.62E-03
8GO:0070469: respiratory chain6.25E-03
9GO:0000145: exocyst1.14E-02
10GO:0000785: chromatin1.14E-02
11GO:0071944: cell periphery1.20E-02
12GO:0032580: Golgi cisterna membrane1.25E-02
13GO:0048046: apoplast1.27E-02
14GO:0009707: chloroplast outer membrane1.71E-02
15GO:0000325: plant-type vacuole1.89E-02
16GO:0090406: pollen tube2.42E-02
17GO:0043231: intracellular membrane-bounded organelle2.70E-02
18GO:0031966: mitochondrial membrane2.85E-02
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Gene type



Gene DE type