Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G12310

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0018023: peptidyl-lysine trimethylation0.00E+00
2GO:0010021: amylopectin biosynthetic process1.01E-06
3GO:0010027: thylakoid membrane organization5.06E-06
4GO:0065002: intracellular protein transmembrane transport2.76E-05
5GO:0043953: protein transport by the Tat complex2.76E-05
6GO:0018026: peptidyl-lysine monomethylation7.01E-05
7GO:0051604: protein maturation1.23E-04
8GO:0016050: vesicle organization1.23E-04
9GO:0005977: glycogen metabolic process1.23E-04
10GO:1902448: positive regulation of shade avoidance1.23E-04
11GO:0019252: starch biosynthetic process1.36E-04
12GO:0006109: regulation of carbohydrate metabolic process2.48E-04
13GO:0010438: cellular response to sulfur starvation3.18E-04
14GO:0010190: cytochrome b6f complex assembly3.92E-04
15GO:0010439: regulation of glucosinolate biosynthetic process6.32E-04
16GO:0010492: maintenance of shoot apical meristem identity6.32E-04
17GO:0009642: response to light intensity6.32E-04
18GO:0048507: meristem development8.07E-04
19GO:0043085: positive regulation of catalytic activity1.09E-03
20GO:0016485: protein processing1.09E-03
21GO:0009773: photosynthetic electron transport in photosystem I1.09E-03
22GO:0009682: induced systemic resistance1.09E-03
23GO:0005983: starch catabolic process1.19E-03
24GO:0006508: proteolysis1.95E-03
25GO:0009625: response to insect2.22E-03
26GO:0006662: glycerol ether metabolic process2.74E-03
27GO:0015979: photosynthesis3.12E-03
28GO:0009567: double fertilization forming a zygote and endosperm3.60E-03
29GO:0034599: cellular response to oxidative stress5.91E-03
30GO:0043086: negative regulation of catalytic activity9.44E-03
31GO:0009742: brassinosteroid mediated signaling pathway1.12E-02
32GO:0009739: response to gibberellin1.71E-02
33GO:0009617: response to bacterium1.79E-02
34GO:0005975: carbohydrate metabolic process2.20E-02
35GO:0045454: cell redox homeostasis2.86E-02
36GO:0006869: lipid transport3.05E-02
37GO:0032259: methylation3.22E-02
38GO:0009751: response to salicylic acid3.29E-02
39GO:0009753: response to jasmonic acid3.49E-02
40GO:0006357: regulation of transcription from RNA polymerase II promoter4.05E-02
RankGO TermAdjusted P value
1GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
2GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
3GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity2.76E-05
4GO:0019156: isoamylase activity7.01E-05
5GO:0009977: proton motive force dependent protein transmembrane transporter activity7.01E-05
6GO:0033201: alpha-1,4-glucan synthase activity7.01E-05
7GO:0004373: glycogen (starch) synthase activity1.23E-04
8GO:0009011: starch synthase activity2.48E-04
9GO:0016279: protein-lysine N-methyltransferase activity2.48E-04
10GO:0008233: peptidase activity2.80E-04
11GO:0042578: phosphoric ester hydrolase activity3.92E-04
12GO:0004556: alpha-amylase activity3.92E-04
13GO:0008047: enzyme activator activity9.92E-04
14GO:0004857: enzyme inhibitor activity1.73E-03
15GO:0004176: ATP-dependent peptidase activity1.97E-03
16GO:0047134: protein-disulfide reductase activity2.48E-03
17GO:0004791: thioredoxin-disulfide reductase activity2.88E-03
18GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.45E-03
19GO:0008236: serine-type peptidase activity4.70E-03
20GO:0004222: metalloendopeptidase activity5.21E-03
21GO:0016874: ligase activity1.03E-02
22GO:0015035: protein disulfide oxidoreductase activity1.10E-02
23GO:0008026: ATP-dependent helicase activity1.12E-02
24GO:0004252: serine-type endopeptidase activity1.36E-02
25GO:0042802: identical protein binding1.88E-02
26GO:0008168: methyltransferase activity2.10E-02
27GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.86E-02
28GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.09E-02
29GO:0016787: hydrolase activity3.10E-02
30GO:0009055: electron carrier activity3.49E-02
31GO:0008289: lipid binding4.20E-02
RankGO TermAdjusted P value
1GO:0043235: receptor complex0.00E+00
2GO:0009507: chloroplast4.65E-15
3GO:0009570: chloroplast stroma2.07E-09
4GO:0009535: chloroplast thylakoid membrane1.00E-07
5GO:0009534: chloroplast thylakoid1.12E-05
6GO:0031361: integral component of thylakoid membrane2.76E-05
7GO:0010287: plastoglobule6.67E-05
8GO:0043036: starch grain7.01E-05
9GO:0033281: TAT protein transport complex1.23E-04
10GO:0009526: plastid envelope2.48E-04
11GO:0055035: plastid thylakoid membrane3.18E-04
12GO:0009501: amyloplast6.32E-04
13GO:0009941: chloroplast envelope8.01E-04
14GO:0009579: thylakoid1.20E-03
15GO:0009508: plastid chromosome1.29E-03
16GO:0009654: photosystem II oxygen evolving complex1.85E-03
17GO:0019898: extrinsic component of membrane3.02E-03
18GO:0009295: nucleoid3.75E-03
19GO:0031977: thylakoid lumen6.45E-03
20GO:0009706: chloroplast inner membrane1.07E-02
21GO:0009543: chloroplast thylakoid lumen1.26E-02
22GO:0005623: cell1.28E-02
23GO:0005759: mitochondrial matrix1.48E-02
24GO:0031969: chloroplast membrane2.51E-02
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Gene type



Gene DE type