co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G10340

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
2	GO:0009768: photosynthesis, light harvesting in photosystem I	1.10E-28
3	GO:0015979: photosynthesis	1.56E-21
4	GO:0018298: protein-chromophore linkage	2.74E-19
5	GO:0009645: response to low light intensity stimulus	5.09E-16
6	GO:0009644: response to high light intensity	3.55E-13
7	GO:0009769: photosynthesis, light harvesting in photosystem II	1.18E-09
8	GO:0010218: response to far red light	4.86E-09
9	GO:0010114: response to red light	1.21E-08
10	GO:0009765: photosynthesis, light harvesting	1.53E-07
11	GO:0009637: response to blue light	1.04E-06
12	GO:0009409: response to cold	2.19E-06
13	GO:0009416: response to light stimulus	6.59E-06
14	GO:0015812: gamma-aminobutyric acid transport	8.86E-06
15	GO:0009269: response to desiccation	1.24E-05
16	GO:0044211: CTP salvage	6.64E-05
17	GO:0050482: arachidonic acid secretion	6.64E-05
18	GO:0010600: regulation of auxin biosynthetic process	9.27E-05
19	GO:0044206: UMP salvage	9.27E-05
20	GO:0030104: water homeostasis	9.27E-05
21	GO:0043097: pyrimidine nucleoside salvage	1.21E-04
22	GO:0006206: pyrimidine nucleobase metabolic process	1.52E-04
23	GO:0009635: response to herbicide	1.52E-04
24	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.85E-04
25	GO:0010196: nonphotochemical quenching	2.19E-04
26	GO:0010161: red light signaling pathway	2.19E-04
27	GO:0006644: phospholipid metabolic process	2.54E-04
28	GO:0010928: regulation of auxin mediated signaling pathway	2.54E-04
29	GO:0009704: de-etiolation	2.54E-04
30	GO:0090333: regulation of stomatal closure	3.29E-04
31	GO:0018119: peptidyl-cysteine S-nitrosylation	4.48E-04
32	GO:0009767: photosynthetic electron transport chain	5.33E-04
33	GO:0003333: amino acid transmembrane transport	8.05E-04
34	GO:0010017: red or far-red light signaling pathway	8.54E-04
35	GO:0071215: cellular response to abscisic acid stimulus	9.02E-04
36	GO:0006814: sodium ion transport	1.16E-03
37	GO:0016126: sterol biosynthetic process	1.61E-03
38	GO:0009735: response to cytokinin	1.65E-03
39	GO:0015995: chlorophyll biosynthetic process	1.79E-03
40	GO:0010119: regulation of stomatal movement	2.12E-03
41	GO:0008643: carbohydrate transport	2.81E-03
42	GO:0009585: red, far-red light phototransduction	3.26E-03
43	GO:0009624: response to nematode	4.15E-03
44	GO:0009058: biosynthetic process	5.01E-03
45	GO:0009723: response to ethylene	9.03E-03
46	GO:0080167: response to karrikin	9.48E-03
47	GO:0016042: lipid catabolic process	1.22E-02
48	GO:0055085: transmembrane transport	2.22E-02
49	GO:0042742: defense response to bacterium	3.10E-02

Rank	GO Term	Adjusted P value
1	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
2	GO:0031409: pigment binding	6.59E-26
3	GO:0016168: chlorophyll binding	1.56E-22
4	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	8.86E-06
5	GO:0046872: metal ion binding	9.76E-06
6	GO:0016630: protochlorophyllide reductase activity	2.38E-05
7	GO:0015180: L-alanine transmembrane transporter activity	2.38E-05
8	GO:0015189: L-lysine transmembrane transporter activity	6.64E-05
9	GO:0015181: arginine transmembrane transporter activity	6.64E-05
10	GO:0004845: uracil phosphoribosyltransferase activity	9.27E-05
11	GO:0005313: L-glutamate transmembrane transporter activity	9.27E-05
12	GO:0004506: squalene monooxygenase activity	9.27E-05
13	GO:0004623: phospholipase A2 activity	1.21E-04
14	GO:0004849: uridine kinase activity	1.85E-04
15	GO:0015297: antiporter activity	3.65E-04
16	GO:0005315: inorganic phosphate transmembrane transporter activity	5.33E-04
17	GO:0008514: organic anion transmembrane transporter activity	9.51E-04
18	GO:0005198: structural molecule activity	2.88E-03
19	GO:0015293: symporter activity	2.88E-03
20	GO:0005509: calcium ion binding	3.31E-03
21	GO:0015171: amino acid transmembrane transporter activity	3.49E-03
22	GO:0022857: transmembrane transporter activity	3.98E-03
23	GO:0005515: protein binding	4.47E-03
24	GO:0015144: carbohydrate transmembrane transporter activity	5.46E-03
25	GO:0005351: sugar:proton symporter activity	5.93E-03
26	GO:0050660: flavin adenine dinucleotide binding	9.03E-03
27	GO:0005525: GTP binding	2.67E-02
28	GO:0016491: oxidoreductase activity	3.78E-02
29	GO:0046983: protein dimerization activity	3.81E-02
30	GO:0004672: protein kinase activity	4.08E-02

Rank	GO Term	Adjusted P value
1	GO:0009522: photosystem I	8.22E-24
2	GO:0009579: thylakoid	1.29E-23
3	GO:0009535: chloroplast thylakoid membrane	5.83E-22
4	GO:0030076: light-harvesting complex	9.72E-20
5	GO:0010287: plastoglobule	2.95E-19
6	GO:0009534: chloroplast thylakoid	4.96E-19
7	GO:0009941: chloroplast envelope	4.44E-14
8	GO:0009523: photosystem II	2.11E-12
9	GO:0009507: chloroplast	1.28E-08
10	GO:0009517: PSII associated light-harvesting complex II	1.53E-07
11	GO:0016021: integral component of membrane	1.41E-06
12	GO:0016020: membrane	3.63E-06
13	GO:0009783: photosystem II antenna complex	8.86E-06
14	GO:0031966: mitochondrial membrane	1.41E-04
15	GO:0009538: photosystem I reaction center	2.54E-04
16	GO:0030095: chloroplast photosystem II	5.76E-04
17	GO:0009654: photosystem II oxygen evolving complex	7.58E-04
18	GO:0042651: thylakoid membrane	7.58E-04
19	GO:0031410: cytoplasmic vesicle	8.54E-04
20	GO:0019898: extrinsic component of membrane	1.21E-03
21	GO:0009707: chloroplast outer membrane	1.92E-03
22	GO:0031977: thylakoid lumen	2.52E-03
23	GO:0009543: chloroplast thylakoid lumen	4.83E-03
24	GO:0005887: integral component of plasma membrane	1.55E-02