Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G10060

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
2GO:0009644: response to high light intensity7.31E-06
3GO:0009773: photosynthetic electron transport in photosystem I1.03E-05
4GO:0030974: thiamine pyrophosphate transport1.67E-05
5GO:0051180: vitamin transport1.67E-05
6GO:0080005: photosystem stoichiometry adjustment4.35E-05
7GO:0015893: drug transport4.35E-05
8GO:0006954: inflammatory response7.77E-05
9GO:0071484: cellular response to light intensity1.17E-04
10GO:0009152: purine ribonucleotide biosynthetic process1.17E-04
11GO:0046653: tetrahydrofolate metabolic process1.17E-04
12GO:0018298: protein-chromophore linkage1.49E-04
13GO:0010117: photoprotection2.09E-04
14GO:0006564: L-serine biosynthetic process2.09E-04
15GO:0009645: response to low light intensity stimulus3.66E-04
16GO:0009231: riboflavin biosynthetic process4.23E-04
17GO:0071482: cellular response to light stimulus4.82E-04
18GO:0007623: circadian rhythm8.05E-04
19GO:0010628: positive regulation of gene expression8.70E-04
20GO:0010207: photosystem II assembly9.39E-04
21GO:0009768: photosynthesis, light harvesting in photosystem I1.23E-03
22GO:0015979: photosynthesis1.70E-03
23GO:0010027: thylakoid membrane organization2.68E-03
24GO:0016126: sterol biosynthetic process2.68E-03
25GO:0000160: phosphorelay signal transduction system3.31E-03
26GO:0006811: ion transport3.42E-03
27GO:0009853: photorespiration3.76E-03
28GO:0006839: mitochondrial transport4.11E-03
29GO:0051707: response to other organism4.47E-03
30GO:0009736: cytokinin-activated signaling pathway5.48E-03
31GO:0009058: biosynthetic process8.47E-03
32GO:0006413: translational initiation9.74E-03
33GO:0010468: regulation of gene expression1.16E-02
34GO:0009658: chloroplast organization1.39E-02
35GO:0046777: protein autophosphorylation1.70E-02
36GO:0006629: lipid metabolic process2.14E-02
37GO:0055114: oxidation-reduction process2.39E-02
38GO:0009735: response to cytokinin3.02E-02
39GO:0009416: response to light stimulus3.22E-02
40GO:0055085: transmembrane transport3.82E-02
RankGO TermAdjusted P value
1GO:0004328: formamidase activity1.67E-05
2GO:0090422: thiamine pyrophosphate transporter activity1.67E-05
3GO:0004617: phosphoglycerate dehydrogenase activity4.35E-05
4GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity4.35E-05
5GO:0016742: hydroxymethyl-, formyl- and related transferase activity7.77E-05
6GO:0008864: formyltetrahydrofolate deformylase activity7.77E-05
7GO:0003935: GTP cyclohydrolase II activity7.77E-05
8GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.17E-04
9GO:0016168: chlorophyll binding1.18E-04
10GO:0004506: squalene monooxygenase activity1.61E-04
11GO:0000293: ferric-chelate reductase activity2.59E-04
12GO:0043022: ribosome binding4.23E-04
13GO:0008081: phosphoric diester hydrolase activity8.70E-04
14GO:0031409: pigment binding1.08E-03
15GO:0022891: substrate-specific transmembrane transporter activity1.47E-03
16GO:0000156: phosphorelay response regulator activity2.28E-03
17GO:0008483: transaminase activity2.48E-03
18GO:0016597: amino acid binding2.57E-03
19GO:0004721: phosphoprotein phosphatase activity2.99E-03
20GO:0051287: NAD binding5.09E-03
21GO:0005525: GTP binding6.28E-03
22GO:0030170: pyridoxal phosphate binding8.79E-03
23GO:0016491: oxidoreductase activity1.02E-02
24GO:0050660: flavin adenine dinucleotide binding1.54E-02
25GO:0042803: protein homodimerization activity1.91E-02
26GO:0009055: electron carrier activity2.25E-02
27GO:0046872: metal ion binding3.11E-02
28GO:0030246: carbohydrate binding3.98E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.73E-09
2GO:0009535: chloroplast thylakoid membrane3.71E-06
3GO:0009782: photosystem I antenna complex1.67E-05
4GO:0009534: chloroplast thylakoid5.59E-04
5GO:0030076: light-harvesting complex1.01E-03
6GO:0009523: photosystem II2.00E-03
7GO:0009570: chloroplast stroma2.33E-03
8GO:0009579: thylakoid4.58E-03
9GO:0009941: chloroplast envelope7.41E-03
10GO:0010287: plastoglobule7.87E-03
11GO:0009543: chloroplast thylakoid lumen8.17E-03
12GO:0005743: mitochondrial inner membrane2.03E-02
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Gene type



Gene DE type