GO Enrichment Analysis of Co-expressed Genes with
AT4G09900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0098586: cellular response to virus | 0.00E+00 |
| 3 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 6 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 8.42E-08 |
| 7 | GO:0010021: amylopectin biosynthetic process | 7.19E-06 |
| 8 | GO:0019252: starch biosynthetic process | 2.95E-05 |
| 9 | GO:0030091: protein repair | 4.65E-05 |
| 10 | GO:0010206: photosystem II repair | 7.31E-05 |
| 11 | GO:0000373: Group II intron splicing | 7.31E-05 |
| 12 | GO:0080051: cutin transport | 8.78E-05 |
| 13 | GO:0065002: intracellular protein transmembrane transport | 8.78E-05 |
| 14 | GO:0043953: protein transport by the Tat complex | 8.78E-05 |
| 15 | GO:0010205: photoinhibition | 8.90E-05 |
| 16 | GO:0080005: photosystem stoichiometry adjustment | 2.08E-04 |
| 17 | GO:0042939: tripeptide transport | 2.08E-04 |
| 18 | GO:0016122: xanthophyll metabolic process | 2.08E-04 |
| 19 | GO:0046741: transport of virus in host, tissue to tissue | 2.08E-04 |
| 20 | GO:0009915: phloem sucrose loading | 2.08E-04 |
| 21 | GO:0015908: fatty acid transport | 2.08E-04 |
| 22 | GO:0055114: oxidation-reduction process | 2.11E-04 |
| 23 | GO:0016050: vesicle organization | 3.48E-04 |
| 24 | GO:0006753: nucleoside phosphate metabolic process | 3.48E-04 |
| 25 | GO:0050482: arachidonic acid secretion | 5.01E-04 |
| 26 | GO:0043572: plastid fission | 5.01E-04 |
| 27 | GO:0010107: potassium ion import | 6.66E-04 |
| 28 | GO:0042938: dipeptide transport | 6.66E-04 |
| 29 | GO:0010222: stem vascular tissue pattern formation | 6.66E-04 |
| 30 | GO:0015994: chlorophyll metabolic process | 6.66E-04 |
| 31 | GO:0098719: sodium ion import across plasma membrane | 8.44E-04 |
| 32 | GO:0010027: thylakoid membrane organization | 9.37E-04 |
| 33 | GO:0016126: sterol biosynthetic process | 9.37E-04 |
| 34 | GO:0010190: cytochrome b6f complex assembly | 1.03E-03 |
| 35 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.03E-03 |
| 36 | GO:0010189: vitamin E biosynthetic process | 1.23E-03 |
| 37 | GO:0015937: coenzyme A biosynthetic process | 1.44E-03 |
| 38 | GO:0055075: potassium ion homeostasis | 1.66E-03 |
| 39 | GO:0006644: phospholipid metabolic process | 1.66E-03 |
| 40 | GO:0048564: photosystem I assembly | 1.66E-03 |
| 41 | GO:0005978: glycogen biosynthetic process | 1.66E-03 |
| 42 | GO:0015996: chlorophyll catabolic process | 1.89E-03 |
| 43 | GO:0090333: regulation of stomatal closure | 2.14E-03 |
| 44 | GO:0098656: anion transmembrane transport | 2.14E-03 |
| 45 | GO:0051453: regulation of intracellular pH | 2.39E-03 |
| 46 | GO:0005982: starch metabolic process | 2.39E-03 |
| 47 | GO:0016485: protein processing | 2.93E-03 |
| 48 | GO:0005983: starch catabolic process | 3.21E-03 |
| 49 | GO:0006094: gluconeogenesis | 3.50E-03 |
| 50 | GO:0009767: photosynthetic electron transport chain | 3.50E-03 |
| 51 | GO:0010588: cotyledon vascular tissue pattern formation | 3.50E-03 |
| 52 | GO:0006807: nitrogen compound metabolic process | 3.50E-03 |
| 53 | GO:0010207: photosystem II assembly | 3.80E-03 |
| 54 | GO:0009266: response to temperature stimulus | 3.80E-03 |
| 55 | GO:0010020: chloroplast fission | 3.80E-03 |
| 56 | GO:0051302: regulation of cell division | 5.07E-03 |
| 57 | GO:0008299: isoprenoid biosynthetic process | 5.07E-03 |
| 58 | GO:0009269: response to desiccation | 5.42E-03 |
| 59 | GO:0009611: response to wounding | 6.62E-03 |
| 60 | GO:0006885: regulation of pH | 7.62E-03 |
| 61 | GO:0006662: glycerol ether metabolic process | 7.62E-03 |
| 62 | GO:0048544: recognition of pollen | 8.02E-03 |
| 63 | GO:0007018: microtubule-based movement | 8.02E-03 |
| 64 | GO:0006814: sodium ion transport | 8.02E-03 |
| 65 | GO:0000302: response to reactive oxygen species | 8.83E-03 |
| 66 | GO:0019761: glucosinolate biosynthetic process | 9.24E-03 |
| 67 | GO:0030163: protein catabolic process | 9.67E-03 |
| 68 | GO:0007275: multicellular organism development | 9.98E-03 |
| 69 | GO:0009567: double fertilization forming a zygote and endosperm | 1.01E-02 |
| 70 | GO:0071805: potassium ion transmembrane transport | 1.05E-02 |
| 71 | GO:0015979: photosynthesis | 1.39E-02 |
| 72 | GO:0006979: response to oxidative stress | 1.59E-02 |
| 73 | GO:0006869: lipid transport | 1.61E-02 |
| 74 | GO:0034599: cellular response to oxidative stress | 1.68E-02 |
| 75 | GO:0006631: fatty acid metabolic process | 1.84E-02 |
| 76 | GO:0006508: proteolysis | 1.95E-02 |
| 77 | GO:0009644: response to high light intensity | 2.06E-02 |
| 78 | GO:0006855: drug transmembrane transport | 2.18E-02 |
| 79 | GO:0009651: response to salt stress | 2.22E-02 |
| 80 | GO:0031347: regulation of defense response | 2.24E-02 |
| 81 | GO:0009809: lignin biosynthetic process | 2.41E-02 |
| 82 | GO:0006813: potassium ion transport | 2.41E-02 |
| 83 | GO:0006857: oligopeptide transport | 2.53E-02 |
| 84 | GO:0006096: glycolytic process | 2.72E-02 |
| 85 | GO:0046686: response to cadmium ion | 2.75E-02 |
| 86 | GO:0048316: seed development | 2.78E-02 |
| 87 | GO:0009626: plant-type hypersensitive response | 2.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 3 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 4 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 5 | GO:0009011: starch synthase activity | 7.19E-06 |
| 6 | GO:0004506: squalene monooxygenase activity | 7.19E-06 |
| 7 | GO:0004176: ATP-dependent peptidase activity | 1.01E-05 |
| 8 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.61E-05 |
| 9 | GO:0010945: CoA pyrophosphatase activity | 8.78E-05 |
| 10 | GO:0019203: carbohydrate phosphatase activity | 8.78E-05 |
| 11 | GO:0034256: chlorophyll(ide) b reductase activity | 8.78E-05 |
| 12 | GO:0015245: fatty acid transporter activity | 8.78E-05 |
| 13 | GO:0035671: enone reductase activity | 8.78E-05 |
| 14 | GO:0050139: nicotinate-N-glucosyltransferase activity | 8.78E-05 |
| 15 | GO:0050308: sugar-phosphatase activity | 8.78E-05 |
| 16 | GO:0004222: metalloendopeptidase activity | 1.02E-04 |
| 17 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 2.08E-04 |
| 18 | GO:0042937: tripeptide transporter activity | 2.08E-04 |
| 19 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.08E-04 |
| 20 | GO:0033201: alpha-1,4-glucan synthase activity | 2.08E-04 |
| 21 | GO:0070402: NADPH binding | 3.48E-04 |
| 22 | GO:0043169: cation binding | 3.48E-04 |
| 23 | GO:0004373: glycogen (starch) synthase activity | 3.48E-04 |
| 24 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 5.01E-04 |
| 25 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 5.01E-04 |
| 26 | GO:0016853: isomerase activity | 5.76E-04 |
| 27 | GO:0005319: lipid transporter activity | 6.66E-04 |
| 28 | GO:0042936: dipeptide transporter activity | 6.66E-04 |
| 29 | GO:0008237: metallopeptidase activity | 8.40E-04 |
| 30 | GO:0004623: phospholipase A2 activity | 8.44E-04 |
| 31 | GO:0000210: NAD+ diphosphatase activity | 1.03E-03 |
| 32 | GO:0015081: sodium ion transmembrane transporter activity | 1.03E-03 |
| 33 | GO:2001070: starch binding | 1.03E-03 |
| 34 | GO:0004332: fructose-bisphosphate aldolase activity | 1.03E-03 |
| 35 | GO:0042578: phosphoric ester hydrolase activity | 1.03E-03 |
| 36 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.66E-03 |
| 37 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 2.14E-03 |
| 38 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.14E-03 |
| 39 | GO:0015386: potassium:proton antiporter activity | 2.93E-03 |
| 40 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 3.21E-03 |
| 41 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.50E-03 |
| 42 | GO:0004565: beta-galactosidase activity | 3.50E-03 |
| 43 | GO:0015079: potassium ion transmembrane transporter activity | 5.07E-03 |
| 44 | GO:0016887: ATPase activity | 5.42E-03 |
| 45 | GO:0016491: oxidoreductase activity | 5.44E-03 |
| 46 | GO:0047134: protein-disulfide reductase activity | 6.86E-03 |
| 47 | GO:0004791: thioredoxin-disulfide reductase activity | 8.02E-03 |
| 48 | GO:0048038: quinone binding | 8.83E-03 |
| 49 | GO:0015385: sodium:proton antiporter activity | 9.67E-03 |
| 50 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 9.67E-03 |
| 51 | GO:0008483: transaminase activity | 1.05E-02 |
| 52 | GO:0051213: dioxygenase activity | 1.14E-02 |
| 53 | GO:0050660: flavin adenine dinucleotide binding | 1.14E-02 |
| 54 | GO:0008233: peptidase activity | 1.20E-02 |
| 55 | GO:0015238: drug transmembrane transporter activity | 1.43E-02 |
| 56 | GO:0030145: manganese ion binding | 1.53E-02 |
| 57 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.63E-02 |
| 58 | GO:0008289: lipid binding | 2.52E-02 |
| 59 | GO:0003777: microtubule motor activity | 2.60E-02 |
| 60 | GO:0031625: ubiquitin protein ligase binding | 2.60E-02 |
| 61 | GO:0045735: nutrient reservoir activity | 2.72E-02 |
| 62 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.91E-02 |
| 63 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.91E-02 |
| 64 | GO:0015035: protein disulfide oxidoreductase activity | 3.17E-02 |
| 65 | GO:0046872: metal ion binding | 3.52E-02 |
| 66 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.71E-02 |
| 67 | GO:0016829: lyase activity | 3.85E-02 |
| 68 | GO:0016787: hydrolase activity | 4.08E-02 |
| 69 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.35E-02 |
| 70 | GO:0015297: antiporter activity | 4.43E-02 |
| 71 | GO:0019825: oxygen binding | 4.55E-02 |
| 72 | GO:0008017: microtubule binding | 4.73E-02 |
| 73 | GO:0008194: UDP-glycosyltransferase activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 5.70E-18 |
| 4 | GO:0009534: chloroplast thylakoid | 3.41E-11 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.89E-10 |
| 6 | GO:0009570: chloroplast stroma | 1.14E-08 |
| 7 | GO:0009941: chloroplast envelope | 1.36E-06 |
| 8 | GO:0009501: amyloplast | 4.65E-05 |
| 9 | GO:0031361: integral component of thylakoid membrane | 8.78E-05 |
| 10 | GO:0031977: thylakoid lumen | 1.59E-04 |
| 11 | GO:0009579: thylakoid | 3.05E-04 |
| 12 | GO:0009897: external side of plasma membrane | 3.48E-04 |
| 13 | GO:0033281: TAT protein transport complex | 3.48E-04 |
| 14 | GO:0010287: plastoglobule | 5.31E-04 |
| 15 | GO:0016021: integral component of membrane | 1.39E-03 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.14E-03 |
| 17 | GO:0009508: plastid chromosome | 3.50E-03 |
| 18 | GO:0009706: chloroplast inner membrane | 3.69E-03 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 4.61E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 5.07E-03 |
| 21 | GO:0005871: kinesin complex | 6.86E-03 |
| 22 | GO:0019898: extrinsic component of membrane | 8.42E-03 |
| 23 | GO:0005778: peroxisomal membrane | 1.05E-02 |
| 24 | GO:0010319: stromule | 1.05E-02 |
| 25 | GO:0009295: nucleoid | 1.05E-02 |
| 26 | GO:0031969: chloroplast membrane | 1.22E-02 |
| 27 | GO:0009707: chloroplast outer membrane | 1.38E-02 |
| 28 | GO:0005759: mitochondrial matrix | 4.28E-02 |