Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G09760

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090701: specification of plant organ identity0.00E+00
2GO:1902171: regulation of tocopherol cyclase activity0.00E+00
3GO:0046677: response to antibiotic0.00E+00
4GO:0048449: floral organ formation0.00E+00
5GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
6GO:0042548: regulation of photosynthesis, light reaction2.19E-05
7GO:0050992: dimethylallyl diphosphate biosynthetic process2.19E-05
8GO:2000306: positive regulation of photomorphogenesis8.58E-05
9GO:0010600: regulation of auxin biosynthetic process8.58E-05
10GO:0016123: xanthophyll biosynthetic process1.12E-04
11GO:0045962: positive regulation of development, heterochronic1.41E-04
12GO:0009643: photosynthetic acclimation1.41E-04
13GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.41E-04
14GO:0010244: response to low fluence blue light stimulus by blue low-fluence system1.71E-04
15GO:0010161: red light signaling pathway2.04E-04
16GO:0010928: regulation of auxin mediated signaling pathway2.37E-04
17GO:0009704: de-etiolation2.37E-04
18GO:0050821: protein stabilization2.37E-04
19GO:0007623: circadian rhythm3.44E-04
20GO:0006535: cysteine biosynthetic process from serine3.81E-04
21GO:0009688: abscisic acid biosynthetic process3.81E-04
22GO:0010629: negative regulation of gene expression3.81E-04
23GO:0018107: peptidyl-threonine phosphorylation4.98E-04
24GO:0019344: cysteine biosynthetic process6.66E-04
25GO:0010017: red or far-red light signaling pathway7.99E-04
26GO:0010182: sugar mediated signaling pathway1.03E-03
27GO:0006814: sodium ion transport1.08E-03
28GO:0006865: amino acid transport2.04E-03
29GO:0009637: response to blue light2.10E-03
30GO:0010114: response to red light2.49E-03
31GO:0009965: leaf morphogenesis2.69E-03
32GO:0009585: red, far-red light phototransduction3.04E-03
33GO:0009624: response to nematode3.86E-03
34GO:0018105: peptidyl-serine phosphorylation3.94E-03
35GO:0006468: protein phosphorylation4.48E-03
36GO:0006970: response to osmotic stress8.00E-03
37GO:0007049: cell cycle8.20E-03
38GO:0009723: response to ethylene8.41E-03
39GO:0048366: leaf development8.51E-03
40GO:0080167: response to karrikin8.82E-03
41GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.03E-03
42GO:0044550: secondary metabolite biosynthetic process9.35E-03
43GO:0009408: response to heat1.16E-02
44GO:0009416: response to light stimulus1.74E-02
45GO:0035556: intracellular signal transduction1.81E-02
46GO:0051301: cell division1.85E-02
47GO:0055085: transmembrane transport2.06E-02
48GO:0006355: regulation of transcription, DNA-templated2.79E-02
49GO:0009414: response to water deprivation2.83E-02
50GO:0030154: cell differentiation3.06E-02
51GO:0006810: transport3.79E-02
52GO:0005975: carbohydrate metabolic process3.88E-02
53GO:0046686: response to cadmium ion3.95E-02
54GO:0009737: response to abscisic acid4.94E-02
RankGO TermAdjusted P value
1GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
2GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity0.00E+00
3GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
4GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity8.12E-06
5GO:0050017: L-3-cyanoalanine synthase activity2.19E-05
6GO:0051538: 3 iron, 4 sulfur cluster binding1.12E-04
7GO:0004462: lactoylglutathione lyase activity1.41E-04
8GO:0004124: cysteine synthase activity1.71E-04
9GO:0071949: FAD binding3.07E-04
10GO:0005315: inorganic phosphate transmembrane transporter activity4.98E-04
11GO:0004672: protein kinase activity5.63E-04
12GO:0008514: organic anion transmembrane transporter activity8.91E-04
13GO:0004674: protein serine/threonine kinase activity2.53E-03
14GO:0015293: symporter activity2.69E-03
15GO:0015171: amino acid transmembrane transporter activity3.26E-03
16GO:0016829: lyase activity4.75E-03
17GO:0003677: DNA binding4.79E-03
18GO:0030170: pyridoxal phosphate binding4.83E-03
19GO:0015144: carbohydrate transmembrane transporter activity5.09E-03
20GO:0005351: sugar:proton symporter activity5.52E-03
21GO:0016301: kinase activity1.20E-02
22GO:0004519: endonuclease activity1.23E-02
23GO:0003700: transcription factor activity, sequence-specific DNA binding1.45E-02
24GO:0008289: lipid binding1.47E-02
25GO:0016740: transferase activity2.01E-02
26GO:0005524: ATP binding2.75E-02
27GO:0044212: transcription regulatory region DNA binding2.88E-02
28GO:0005215: transporter activity3.10E-02
29GO:0046983: protein dimerization activity3.54E-02
RankGO TermAdjusted P value
1GO:0042651: thylakoid membrane7.09E-04
2GO:0009535: chloroplast thylakoid membrane9.48E-04
3GO:0009941: chloroplast envelope2.39E-03
4GO:0009507: chloroplast3.45E-03
5GO:0010287: plastoglobule4.34E-03
6GO:0031969: chloroplast membrane8.82E-03
7GO:0009579: thylakoid1.98E-02
8GO:0009534: chloroplast thylakoid1.99E-02
9GO:0009570: chloroplast stroma2.12E-02
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Gene type



Gene DE type