co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G09570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
2	GO:0072321: chaperone-mediated protein transport	0.00E+00
3	GO:0071433: cell wall repair	0.00E+00
4	GO:2001143: N-methylnicotinate transport	0.00E+00
5	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
6	GO:0071327: cellular response to trehalose stimulus	0.00E+00
7	GO:1900367: positive regulation of defense response to insect	0.00E+00
8	GO:2001142: nicotinate transport	0.00E+00
9	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
10	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
11	GO:2000072: regulation of defense response to fungus, incompatible interaction	1.25E-06
12	GO:0072661: protein targeting to plasma membrane	4.66E-06
13	GO:0015696: ammonium transport	1.08E-05
14	GO:0080142: regulation of salicylic acid biosynthetic process	2.01E-05
15	GO:0072488: ammonium transmembrane transport	2.01E-05
16	GO:0006099: tricarboxylic acid cycle	3.00E-05
17	GO:0006886: intracellular protein transport	3.20E-05
18	GO:0006457: protein folding	6.22E-05
19	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	6.84E-05
20	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.18E-04
21	GO:0006083: acetate metabolic process	1.60E-04
22	GO:0019276: UDP-N-acetylgalactosamine metabolic process	1.60E-04
23	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	1.60E-04
24	GO:0034975: protein folding in endoplasmic reticulum	1.60E-04
25	GO:0006047: UDP-N-acetylglucosamine metabolic process	1.60E-04
26	GO:0051245: negative regulation of cellular defense response	1.60E-04
27	GO:1901183: positive regulation of camalexin biosynthetic process	1.60E-04
28	GO:0031349: positive regulation of defense response	3.65E-04
29	GO:0010235: guard mother cell cytokinesis	3.65E-04
30	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.65E-04
31	GO:0051258: protein polymerization	3.65E-04
32	GO:0051252: regulation of RNA metabolic process	3.65E-04
33	GO:0002221: pattern recognition receptor signaling pathway	3.65E-04
34	GO:0015709: thiosulfate transport	3.65E-04
35	GO:0031204: posttranslational protein targeting to membrane, translocation	3.65E-04
36	GO:0071422: succinate transmembrane transport	3.65E-04
37	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.65E-04
38	GO:0010618: aerenchyma formation	3.65E-04
39	GO:0080181: lateral root branching	3.65E-04
40	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.65E-04
41	GO:0009867: jasmonic acid mediated signaling pathway	3.82E-04
42	GO:0045087: innate immune response	3.82E-04
43	GO:0006626: protein targeting to mitochondrion	3.89E-04
44	GO:0010359: regulation of anion channel activity	5.97E-04
45	GO:0055074: calcium ion homeostasis	5.97E-04
46	GO:0006011: UDP-glucose metabolic process	5.97E-04
47	GO:0045039: protein import into mitochondrial inner membrane	5.97E-04
48	GO:0015695: organic cation transport	5.97E-04
49	GO:0046168: glycerol-3-phosphate catabolic process	5.97E-04
50	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	5.97E-04
51	GO:0009863: salicylic acid mediated signaling pathway	6.05E-04
52	GO:0015992: proton transport	7.30E-04
53	GO:0031348: negative regulation of defense response	7.98E-04
54	GO:0071323: cellular response to chitin	8.53E-04
55	GO:0000187: activation of MAPK activity	8.53E-04
56	GO:0015729: oxaloacetate transport	8.53E-04
57	GO:0006072: glycerol-3-phosphate metabolic process	8.53E-04
58	GO:0033014: tetrapyrrole biosynthetic process	8.53E-04
59	GO:0006612: protein targeting to membrane	8.53E-04
60	GO:0010148: transpiration	8.53E-04
61	GO:0009626: plant-type hypersensitive response	1.02E-03
62	GO:0016192: vesicle-mediated transport	1.08E-03
63	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.13E-03
64	GO:0010363: regulation of plant-type hypersensitive response	1.13E-03
65	GO:0000460: maturation of 5.8S rRNA	1.13E-03
66	GO:0045824: negative regulation of innate immune response	1.13E-03
67	GO:0009553: embryo sac development	1.15E-03
68	GO:0010197: polar nucleus fusion	1.17E-03
69	GO:0046283: anthocyanin-containing compound metabolic process	1.43E-03
70	GO:0010225: response to UV-C	1.43E-03
71	GO:0071423: malate transmembrane transport	1.43E-03
72	GO:0000741: karyogamy	1.76E-03
73	GO:0035435: phosphate ion transmembrane transport	1.76E-03
74	GO:0010942: positive regulation of cell death	1.76E-03
75	GO:0000470: maturation of LSU-rRNA	1.76E-03
76	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.76E-03
77	GO:0060918: auxin transport	1.76E-03
78	GO:0045040: protein import into mitochondrial outer membrane	1.76E-03
79	GO:0009408: response to heat	1.80E-03
80	GO:0006694: steroid biosynthetic process	2.11E-03
81	GO:0010310: regulation of hydrogen peroxide metabolic process	2.11E-03
82	GO:0000911: cytokinesis by cell plate formation	2.11E-03
83	GO:0009627: systemic acquired resistance	2.30E-03
84	GO:0006906: vesicle fusion	2.30E-03
85	GO:0008272: sulfate transport	2.48E-03
86	GO:0006468: protein phosphorylation	2.65E-03
87	GO:0043068: positive regulation of programmed cell death	2.88E-03
88	GO:0006605: protein targeting	2.88E-03
89	GO:0006102: isocitrate metabolic process	2.88E-03
90	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.88E-03
91	GO:0006499: N-terminal protein myristoylation	2.96E-03
92	GO:0010119: regulation of stomatal movement	3.10E-03
93	GO:0010204: defense response signaling pathway, resistance gene-independent	3.29E-03
94	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.29E-03
95	GO:0009699: phenylpropanoid biosynthetic process	3.29E-03
96	GO:0006783: heme biosynthetic process	3.72E-03
97	GO:0007338: single fertilization	3.72E-03
98	GO:0006887: exocytosis	4.03E-03
99	GO:1900426: positive regulation of defense response to bacterium	4.17E-03
100	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.17E-03
101	GO:0000103: sulfate assimilation	4.64E-03
102	GO:0006032: chitin catabolic process	4.64E-03
103	GO:0043069: negative regulation of programmed cell death	4.64E-03
104	GO:0010162: seed dormancy process	4.64E-03
105	GO:0015031: protein transport	5.11E-03
106	GO:0006913: nucleocytoplasmic transport	5.12E-03
107	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.62E-03
108	GO:0016925: protein sumoylation	5.62E-03
109	GO:0071365: cellular response to auxin stimulus	5.62E-03
110	GO:0002213: defense response to insect	5.62E-03
111	GO:0046777: protein autophosphorylation	5.89E-03
112	GO:0006807: nitrogen compound metabolic process	6.14E-03
113	GO:0045454: cell redox homeostasis	6.79E-03
114	GO:0070588: calcium ion transmembrane transport	7.22E-03
115	GO:0009825: multidimensional cell growth	7.22E-03
116	GO:0046686: response to cadmium ion	7.28E-03
117	GO:0000162: tryptophan biosynthetic process	7.79E-03
118	GO:0034976: response to endoplasmic reticulum stress	7.79E-03
119	GO:0010187: negative regulation of seed germination	8.38E-03
120	GO:0009944: polarity specification of adaxial/abaxial axis	8.38E-03
121	GO:0000027: ribosomal large subunit assembly	8.38E-03
122	GO:0080147: root hair cell development	8.38E-03
123	GO:0018105: peptidyl-serine phosphorylation	8.62E-03
124	GO:0016998: cell wall macromolecule catabolic process	9.59E-03
125	GO:0048278: vesicle docking	9.59E-03
126	GO:0030433: ubiquitin-dependent ERAD pathway	1.02E-02
127	GO:0009814: defense response, incompatible interaction	1.02E-02
128	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.02E-02
129	GO:0009294: DNA mediated transformation	1.09E-02
130	GO:0009625: response to insect	1.09E-02
131	GO:0019722: calcium-mediated signaling	1.15E-02
132	GO:0009306: protein secretion	1.15E-02
133	GO:0042742: defense response to bacterium	1.26E-02
134	GO:0006979: response to oxidative stress	1.27E-02
135	GO:0010051: xylem and phloem pattern formation	1.29E-02
136	GO:0006662: glycerol ether metabolic process	1.36E-02
137	GO:0040008: regulation of growth	1.38E-02
138	GO:0061025: membrane fusion	1.43E-02
139	GO:0006623: protein targeting to vacuole	1.50E-02
140	GO:0006891: intra-Golgi vesicle-mediated transport	1.58E-02
141	GO:0007166: cell surface receptor signaling pathway	1.66E-02
142	GO:0009617: response to bacterium	1.73E-02
143	GO:0030163: protein catabolic process	1.73E-02
144	GO:0006464: cellular protein modification process	1.81E-02
145	GO:0009567: double fertilization forming a zygote and endosperm	1.81E-02
146	GO:0035556: intracellular signal transduction	1.97E-02
147	GO:0009615: response to virus	2.05E-02
148	GO:0001666: response to hypoxia	2.05E-02
149	GO:0009816: defense response to bacterium, incompatible interaction	2.13E-02
150	GO:0050832: defense response to fungus	2.21E-02
151	GO:0006810: transport	2.23E-02
152	GO:0015995: chlorophyll biosynthetic process	2.30E-02
153	GO:0010311: lateral root formation	2.56E-02
154	GO:0010043: response to zinc ion	2.74E-02
155	GO:0009631: cold acclimation	2.74E-02
156	GO:0080167: response to karrikin	2.79E-02
157	GO:0034599: cellular response to oxidative stress	3.02E-02
158	GO:0006839: mitochondrial transport	3.21E-02
159	GO:0006897: endocytosis	3.31E-02
160	GO:0006631: fatty acid metabolic process	3.31E-02
161	GO:0051707: response to other organism	3.51E-02
162	GO:0000154: rRNA modification	3.81E-02
163	GO:0009737: response to abscisic acid	3.85E-02
164	GO:0000165: MAPK cascade	4.02E-02
165	GO:0009751: response to salicylic acid	4.05E-02
166	GO:0008152: metabolic process	4.52E-02
167	GO:0009909: regulation of flower development	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
3	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
4	GO:0090416: nicotinate transporter activity	0.00E+00
5	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
6	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
7	GO:0004164: diphthine synthase activity	0.00E+00
8	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
9	GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group	0.00E+00
10	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.25E-06
11	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.25E-06
12	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.69E-05
13	GO:0008519: ammonium transmembrane transporter activity	4.89E-05
14	GO:0004656: procollagen-proline 4-dioxygenase activity	6.84E-05
15	GO:0051082: unfolded protein binding	1.50E-04
16	GO:0004325: ferrochelatase activity	1.60E-04
17	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	1.60E-04
18	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.60E-04
19	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	1.60E-04
20	GO:0003987: acetate-CoA ligase activity	1.60E-04
21	GO:0015085: calcium ion transmembrane transporter activity	1.60E-04
22	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.60E-04
23	GO:0048037: cofactor binding	1.60E-04
24	GO:0005509: calcium ion binding	1.66E-04
25	GO:0008565: protein transporter activity	2.95E-04
26	GO:0015117: thiosulfate transmembrane transporter activity	3.65E-04
27	GO:1901677: phosphate transmembrane transporter activity	3.65E-04
28	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	3.65E-04
29	GO:0043021: ribonucleoprotein complex binding	3.65E-04
30	GO:0008428: ribonuclease inhibitor activity	3.65E-04
31	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	5.97E-04
32	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	5.97E-04
33	GO:0005310: dicarboxylic acid transmembrane transporter activity	5.97E-04
34	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	5.97E-04
35	GO:0015141: succinate transmembrane transporter activity	5.97E-04
36	GO:0004449: isocitrate dehydrogenase (NAD+) activity	8.53E-04
37	GO:0017077: oxidative phosphorylation uncoupler activity	8.53E-04
38	GO:0015131: oxaloacetate transmembrane transporter activity	8.53E-04
39	GO:0009678: hydrogen-translocating pyrophosphatase activity	8.53E-04
40	GO:0003756: protein disulfide isomerase activity	9.39E-04
41	GO:0000166: nucleotide binding	9.77E-04
42	GO:0043495: protein anchor	1.13E-03
43	GO:0004834: tryptophan synthase activity	1.13E-03
44	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.13E-03
45	GO:0015035: protein disulfide oxidoreductase activity	1.23E-03
46	GO:0031386: protein tag	1.43E-03
47	GO:0002020: protease binding	1.43E-03
48	GO:0008948: oxaloacetate decarboxylase activity	1.43E-03
49	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.63E-03
50	GO:0005524: ATP binding	1.66E-03
51	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.76E-03
52	GO:0031593: polyubiquitin binding	1.76E-03
53	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.76E-03
54	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.76E-03
55	GO:0016208: AMP binding	1.76E-03
56	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.30E-03
57	GO:0004683: calmodulin-dependent protein kinase activity	2.43E-03
58	GO:0004674: protein serine/threonine kinase activity	2.45E-03
59	GO:0030515: snoRNA binding	2.48E-03
60	GO:0008320: protein transmembrane transporter activity	2.48E-03
61	GO:0004427: inorganic diphosphatase activity	2.48E-03
62	GO:0015140: malate transmembrane transporter activity	2.48E-03
63	GO:0004708: MAP kinase kinase activity	2.88E-03
64	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.40E-03
65	GO:0000149: SNARE binding	3.71E-03
66	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.17E-03
67	GO:0005484: SNAP receptor activity	4.37E-03
68	GO:0004568: chitinase activity	4.64E-03
69	GO:0015116: sulfate transmembrane transporter activity	5.62E-03
70	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.14E-03
71	GO:0031072: heat shock protein binding	6.14E-03
72	GO:0005388: calcium-transporting ATPase activity	6.14E-03
73	GO:0004190: aspartic-type endopeptidase activity	7.22E-03
74	GO:0008061: chitin binding	7.22E-03
75	GO:0003712: transcription cofactor activity	7.22E-03
76	GO:0005507: copper ion binding	7.38E-03
77	GO:0031418: L-ascorbic acid binding	8.38E-03
78	GO:0004407: histone deacetylase activity	8.38E-03
79	GO:0043130: ubiquitin binding	8.38E-03
80	GO:0004707: MAP kinase activity	9.59E-03
81	GO:0016779: nucleotidyltransferase activity	1.02E-02
82	GO:0005515: protein binding	1.03E-02
83	GO:0022891: substrate-specific transmembrane transporter activity	1.09E-02
84	GO:0030170: pyridoxal phosphate binding	1.17E-02
85	GO:0047134: protein-disulfide reductase activity	1.22E-02
86	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.35E-02
87	GO:0030276: clathrin binding	1.36E-02
88	GO:0004791: thioredoxin-disulfide reductase activity	1.43E-02
89	GO:0004197: cysteine-type endopeptidase activity	1.65E-02
90	GO:0016301: kinase activity	1.84E-02
91	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.89E-02
92	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.30E-02
93	GO:0004806: triglyceride lipase activity	2.30E-02
94	GO:0004222: metalloendopeptidase activity	2.65E-02
95	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.74E-02
96	GO:0005516: calmodulin binding	3.07E-02
97	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.12E-02
98	GO:0042803: protein homodimerization activity	3.50E-02
99	GO:0051287: NAD binding	4.02E-02
100	GO:0009055: electron carrier activity	4.40E-02
101	GO:0016298: lipase activity	4.44E-02
102	GO:0031625: ubiquitin protein ligase binding	4.66E-02
103	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
2	GO:0005784: Sec61 translocon complex	0.00E+00
3	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
4	GO:0005886: plasma membrane	1.94E-06
5	GO:0005783: endoplasmic reticulum	2.86E-06
6	GO:0005788: endoplasmic reticulum lumen	1.09E-05
7	GO:0005829: cytosol	5.74E-05
8	GO:0045252: oxoglutarate dehydrogenase complex	1.60E-04
9	GO:0030665: clathrin-coated vesicle membrane	2.16E-04
10	GO:0009506: plasmodesma	2.34E-04
11	GO:0005774: vacuolar membrane	3.24E-04
12	GO:0070545: PeBoW complex	3.65E-04
13	GO:0005901: caveola	3.65E-04
14	GO:0030132: clathrin coat of coated pit	5.97E-04
15	GO:0030130: clathrin coat of trans-Golgi network vesicle	5.97E-04
16	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	8.37E-04
17	GO:0009331: glycerol-3-phosphate dehydrogenase complex	8.53E-04
18	GO:0009504: cell plate	1.35E-03
19	GO:0031428: box C/D snoRNP complex	1.76E-03
20	GO:0005789: endoplasmic reticulum membrane	2.00E-03
21	GO:0016363: nuclear matrix	2.11E-03
22	GO:0030687: preribosome, large subunit precursor	2.48E-03
23	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.48E-03
24	GO:0019005: SCF ubiquitin ligase complex	2.69E-03
25	GO:0030131: clathrin adaptor complex	2.88E-03
26	GO:0005773: vacuole	2.93E-03
27	GO:0009514: glyoxysome	3.29E-03
28	GO:0005742: mitochondrial outer membrane translocase complex	3.29E-03
29	GO:0031901: early endosome membrane	3.72E-03
30	GO:0031201: SNARE complex	4.03E-03
31	GO:0005794: Golgi apparatus	4.04E-03
32	GO:0005618: cell wall	4.43E-03
33	GO:0017119: Golgi transport complex	4.64E-03
34	GO:0005737: cytoplasm	5.50E-03
35	GO:0032040: small-subunit processome	5.62E-03
36	GO:0031012: extracellular matrix	6.14E-03
37	GO:0005795: Golgi stack	7.22E-03
38	GO:0005834: heterotrimeric G-protein complex	7.40E-03
39	GO:0005743: mitochondrial inner membrane	8.09E-03
40	GO:0005758: mitochondrial intermembrane space	8.38E-03
41	GO:0005741: mitochondrial outer membrane	9.59E-03
42	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.15E-02
43	GO:0030136: clathrin-coated vesicle	1.22E-02
44	GO:0005887: integral component of plasma membrane	1.31E-02
45	GO:0016592: mediator complex	1.65E-02
46	GO:0022626: cytosolic ribosome	1.74E-02
47	GO:0032580: Golgi cisterna membrane	1.81E-02
48	GO:0005778: peroxisomal membrane	1.89E-02
49	GO:0000932: P-body	2.05E-02
50	GO:0000151: ubiquitin ligase complex	2.47E-02
51	GO:0015934: large ribosomal subunit	2.74E-02
52	GO:0005730: nucleolus	2.75E-02
53	GO:0031225: anchored component of membrane	3.20E-02
54	GO:0031902: late endosome membrane	3.31E-02
55	GO:0005802: trans-Golgi network	3.31E-02
56	GO:0005622: intracellular	3.76E-02
57	GO:0005768: endosome	3.88E-02