co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G08500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046109: uridine biosynthetic process	0.00E+00
2	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
3	GO:0000188: inactivation of MAPK activity	0.00E+00
4	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
5	GO:0006182: cGMP biosynthetic process	0.00E+00
6	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
7	GO:0006014: D-ribose metabolic process	2.21E-05
8	GO:0010265: SCF complex assembly	9.88E-05
9	GO:0042759: long-chain fatty acid biosynthetic process	9.88E-05
10	GO:0051245: negative regulation of cellular defense response	9.88E-05
11	GO:0019567: arabinose biosynthetic process	9.88E-05
12	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	9.88E-05
13	GO:0006481: C-terminal protein methylation	9.88E-05
14	GO:0010941: regulation of cell death	9.88E-05
15	GO:0043069: negative regulation of programmed cell death	1.26E-04
16	GO:0000266: mitochondrial fission	1.72E-04
17	GO:0060919: auxin influx	2.32E-04
18	GO:0009727: detection of ethylene stimulus	2.32E-04
19	GO:0019441: tryptophan catabolic process to kynurenine	2.32E-04
20	GO:0009863: salicylic acid mediated signaling pathway	3.16E-04
21	GO:0010200: response to chitin	3.83E-04
22	GO:0010359: regulation of anion channel activity	3.86E-04
23	GO:0009410: response to xenobiotic stimulus	3.86E-04
24	GO:2000034: regulation of seed maturation	3.86E-04
25	GO:0009814: defense response, incompatible interaction	4.20E-04
26	GO:0009620: response to fungus	4.64E-04
27	GO:0009052: pentose-phosphate shunt, non-oxidative branch	5.54E-04
28	GO:0006612: protein targeting to membrane	5.54E-04
29	GO:0046513: ceramide biosynthetic process	5.54E-04
30	GO:0010116: positive regulation of abscisic acid biosynthetic process	5.54E-04
31	GO:2000114: regulation of establishment of cell polarity	5.54E-04
32	GO:0009399: nitrogen fixation	5.54E-04
33	GO:0072583: clathrin-dependent endocytosis	5.54E-04
34	GO:0019252: starch biosynthetic process	7.16E-04
35	GO:0006542: glutamine biosynthetic process	7.37E-04
36	GO:0045227: capsule polysaccharide biosynthetic process	7.37E-04
37	GO:0033358: UDP-L-arabinose biosynthetic process	7.37E-04
38	GO:0010363: regulation of plant-type hypersensitive response	7.37E-04
39	GO:0018344: protein geranylgeranylation	9.32E-04
40	GO:0010225: response to UV-C	9.32E-04
41	GO:0030308: negative regulation of cell growth	9.32E-04
42	GO:1902456: regulation of stomatal opening	1.14E-03
43	GO:0002238: response to molecule of fungal origin	1.14E-03
44	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.14E-03
45	GO:0010315: auxin efflux	1.14E-03
46	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.18E-03
47	GO:0009617: response to bacterium	1.28E-03
48	GO:0000911: cytokinesis by cell plate formation	1.36E-03
49	GO:0050829: defense response to Gram-negative bacterium	1.59E-03
50	GO:1902074: response to salt	1.59E-03
51	GO:0009867: jasmonic acid mediated signaling pathway	1.77E-03
52	GO:0048766: root hair initiation	1.84E-03
53	GO:0016559: peroxisome fission	1.84E-03
54	GO:0006887: exocytosis	2.09E-03
55	GO:0043562: cellular response to nitrogen levels	2.10E-03
56	GO:0009808: lignin metabolic process	2.10E-03
57	GO:0009821: alkaloid biosynthetic process	2.37E-03
58	GO:0009636: response to toxic substance	2.54E-03
59	GO:0008202: steroid metabolic process	2.65E-03
60	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.73E-03
61	GO:0006886: intracellular protein transport	3.03E-03
62	GO:0006265: DNA topological change	3.25E-03
63	GO:0030148: sphingolipid biosynthetic process	3.25E-03
64	GO:0006626: protein targeting to mitochondrion	3.89E-03
65	GO:0055046: microgametogenesis	3.89E-03
66	GO:0010540: basipetal auxin transport	4.22E-03
67	GO:0006468: protein phosphorylation	4.32E-03
68	GO:0010030: positive regulation of seed germination	4.57E-03
69	GO:0070588: calcium ion transmembrane transport	4.57E-03
70	GO:0009225: nucleotide-sugar metabolic process	4.57E-03
71	GO:0009873: ethylene-activated signaling pathway	5.25E-03
72	GO:0006338: chromatin remodeling	5.28E-03
73	GO:0048278: vesicle docking	6.03E-03
74	GO:0071369: cellular response to ethylene stimulus	6.82E-03
75	GO:0006012: galactose metabolic process	6.82E-03
76	GO:0010091: trichome branching	7.23E-03
77	GO:0010584: pollen exine formation	7.23E-03
78	GO:0009561: megagametogenesis	7.23E-03
79	GO:0042391: regulation of membrane potential	8.07E-03
80	GO:0010051: xylem and phloem pattern formation	8.07E-03
81	GO:0010087: phloem or xylem histogenesis	8.07E-03
82	GO:0007166: cell surface receptor signaling pathway	8.49E-03
83	GO:0046323: glucose import	8.50E-03
84	GO:0061025: membrane fusion	8.94E-03
85	GO:0042752: regulation of circadian rhythm	8.94E-03
86	GO:0007059: chromosome segregation	8.94E-03
87	GO:0009630: gravitropism	1.03E-02
88	GO:0007264: small GTPase mediated signal transduction	1.03E-02
89	GO:0006904: vesicle docking involved in exocytosis	1.18E-02
90	GO:0009615: response to virus	1.28E-02
91	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.33E-02
92	GO:0009816: defense response to bacterium, incompatible interaction	1.33E-02
93	GO:0042128: nitrate assimilation	1.38E-02
94	GO:0006906: vesicle fusion	1.38E-02
95	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.48E-02
96	GO:0030244: cellulose biosynthetic process	1.54E-02
97	GO:0010311: lateral root formation	1.60E-02
98	GO:0009832: plant-type cell wall biogenesis	1.60E-02
99	GO:0048767: root hair elongation	1.60E-02
100	GO:0009407: toxin catabolic process	1.65E-02
101	GO:0010119: regulation of stomatal movement	1.71E-02
102	GO:0045892: negative regulation of transcription, DNA-templated	1.74E-02
103	GO:0016051: carbohydrate biosynthetic process	1.82E-02
104	GO:0006952: defense response	2.03E-02
105	GO:0006897: endocytosis	2.06E-02
106	GO:0009751: response to salicylic acid	2.08E-02
107	GO:0009926: auxin polar transport	2.18E-02
108	GO:0000209: protein polyubiquitination	2.24E-02
109	GO:0009753: response to jasmonic acid	2.27E-02
110	GO:0006260: DNA replication	2.50E-02
111	GO:0009846: pollen germination	2.57E-02
112	GO:0009809: lignin biosynthetic process	2.70E-02
113	GO:0010224: response to UV-B	2.77E-02
114	GO:0051603: proteolysis involved in cellular protein catabolic process	2.77E-02
115	GO:0006417: regulation of translation	2.90E-02
116	GO:0009734: auxin-activated signaling pathway	2.98E-02
117	GO:0006096: glycolytic process	3.04E-02
118	GO:0048367: shoot system development	3.11E-02
119	GO:0046686: response to cadmium ion	3.35E-02
120	GO:0042545: cell wall modification	3.39E-02
121	GO:0018105: peptidyl-serine phosphorylation	3.54E-02
122	GO:0051726: regulation of cell cycle	3.62E-02
123	GO:0009742: brassinosteroid mediated signaling pathway	3.62E-02
124	GO:0009738: abscisic acid-activated signaling pathway	3.63E-02
125	GO:0009058: biosynthetic process	4.22E-02
126	GO:0006633: fatty acid biosynthetic process	4.78E-02
127	GO:0016036: cellular response to phosphate starvation	4.86E-02
128	GO:0009737: response to abscisic acid	4.91E-02
129	GO:0040008: regulation of growth	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
2	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
3	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
4	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
5	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
6	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
7	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
8	GO:0005496: steroid binding	1.46E-05
9	GO:0004747: ribokinase activity	3.14E-05
10	GO:0008865: fructokinase activity	5.57E-05
11	GO:0015168: glycerol transmembrane transporter activity	9.88E-05
12	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	9.88E-05
13	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	9.88E-05
14	GO:0016301: kinase activity	1.34E-04
15	GO:0045140: inositol phosphoceramide synthase activity	2.32E-04
16	GO:0004061: arylformamidase activity	2.32E-04
17	GO:0050291: sphingosine N-acyltransferase activity	2.32E-04
18	GO:0050736: O-malonyltransferase activity	2.32E-04
19	GO:0004751: ribose-5-phosphate isomerase activity	3.86E-04
20	GO:0004383: guanylate cyclase activity	3.86E-04
21	GO:0016805: dipeptidase activity	3.86E-04
22	GO:0016595: glutamate binding	3.86E-04
23	GO:0005093: Rab GDP-dissociation inhibitor activity	3.86E-04
24	GO:0061630: ubiquitin protein ligase activity	3.92E-04
25	GO:0005354: galactose transmembrane transporter activity	5.54E-04
26	GO:0050373: UDP-arabinose 4-epimerase activity	7.37E-04
27	GO:0003917: DNA topoisomerase type I activity	7.37E-04
28	GO:0010328: auxin influx transmembrane transporter activity	7.37E-04
29	GO:0004356: glutamate-ammonia ligase activity	9.32E-04
30	GO:0015145: monosaccharide transmembrane transporter activity	9.32E-04
31	GO:0017137: Rab GTPase binding	9.32E-04
32	GO:0004040: amidase activity	9.32E-04
33	GO:0003978: UDP-glucose 4-epimerase activity	1.36E-03
34	GO:0008235: metalloexopeptidase activity	1.59E-03
35	GO:0052747: sinapyl alcohol dehydrogenase activity	1.84E-03
36	GO:0004033: aldo-keto reductase (NADP) activity	1.84E-03
37	GO:0008142: oxysterol binding	2.10E-03
38	GO:0005524: ATP binding	2.17E-03
39	GO:0071949: FAD binding	2.37E-03
40	GO:0030955: potassium ion binding	2.65E-03
41	GO:0016844: strictosidine synthase activity	2.65E-03
42	GO:0004743: pyruvate kinase activity	2.65E-03
43	GO:0004713: protein tyrosine kinase activity	2.95E-03
44	GO:0004177: aminopeptidase activity	3.25E-03
45	GO:0008559: xenobiotic-transporting ATPase activity	3.25E-03
46	GO:0047372: acylglycerol lipase activity	3.25E-03
47	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.57E-03
48	GO:0005388: calcium-transporting ATPase activity	3.89E-03
49	GO:0010329: auxin efflux transmembrane transporter activity	3.89E-03
50	GO:0030552: cAMP binding	4.57E-03
51	GO:0030553: cGMP binding	4.57E-03
52	GO:0004725: protein tyrosine phosphatase activity	4.92E-03
53	GO:0004674: protein serine/threonine kinase activity	5.28E-03
54	GO:0005216: ion channel activity	5.65E-03
55	GO:0043424: protein histidine kinase binding	5.65E-03
56	GO:0005249: voltage-gated potassium channel activity	8.07E-03
57	GO:0030551: cyclic nucleotide binding	8.07E-03
58	GO:0030276: clathrin binding	8.50E-03
59	GO:0005355: glucose transmembrane transporter activity	8.94E-03
60	GO:0016597: amino acid binding	1.23E-02
61	GO:0005516: calmodulin binding	1.32E-02
62	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.38E-02
63	GO:0030247: polysaccharide binding	1.43E-02
64	GO:0004683: calmodulin-dependent protein kinase activity	1.43E-02
65	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.49E-02
66	GO:0005096: GTPase activator activity	1.60E-02
67	GO:0030145: manganese ion binding	1.71E-02
68	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.71E-02
69	GO:0000149: SNARE binding	1.94E-02
70	GO:0004364: glutathione transferase activity	2.12E-02
71	GO:0003824: catalytic activity	2.16E-02
72	GO:0005484: SNAP receptor activity	2.18E-02
73	GO:0016491: oxidoreductase activity	2.72E-02
74	GO:0045330: aspartyl esterase activity	2.90E-02
75	GO:0031625: ubiquitin protein ligase binding	2.90E-02
76	GO:0008289: lipid binding	2.94E-02
77	GO:0030599: pectinesterase activity	3.32E-02
78	GO:0004252: serine-type endopeptidase activity	4.38E-02
79	GO:0015144: carbohydrate transmembrane transporter activity	4.62E-02
80	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.86E-02
81	GO:0046910: pectinesterase inhibitor activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0045335: phagocytic vesicle	0.00E+00
2	GO:0005829: cytosol	3.20E-07
3	GO:0005886: plasma membrane	2.87E-06
4	GO:0045334: clathrin-coated endocytic vesicle	9.88E-05
5	GO:0070062: extracellular exosome	5.54E-04
6	GO:0031461: cullin-RING ubiquitin ligase complex	5.54E-04
7	GO:0005968: Rab-protein geranylgeranyltransferase complex	5.54E-04
8	GO:0031298: replication fork protection complex	7.37E-04
9	GO:0005783: endoplasmic reticulum	1.11E-03
10	GO:0000794: condensed nuclear chromosome	1.59E-03
11	GO:0030131: clathrin adaptor complex	1.84E-03
12	GO:0030125: clathrin vesicle coat	2.95E-03
13	GO:0009524: phragmoplast	5.68E-03
14	GO:0005741: mitochondrial outer membrane	6.03E-03
15	GO:0005905: clathrin-coated pit	6.03E-03
16	GO:0016021: integral component of membrane	6.21E-03
17	GO:0005777: peroxisome	9.37E-03
18	GO:0009504: cell plate	9.39E-03
19	GO:0005794: Golgi apparatus	1.02E-02
20	GO:0000145: exocyst	1.03E-02
21	GO:0071944: cell periphery	1.08E-02
22	GO:0032580: Golgi cisterna membrane	1.13E-02
23	GO:0005778: peroxisomal membrane	1.18E-02
24	GO:0000151: ubiquitin ligase complex	1.54E-02
25	GO:0005819: spindle	1.94E-02
26	GO:0031902: late endosome membrane	2.06E-02
27	GO:0031201: SNARE complex	2.06E-02
28	GO:0031966: mitochondrial membrane	2.57E-02
29	GO:0016020: membrane	2.68E-02
30	GO:0005887: integral component of plasma membrane	2.87E-02
31	GO:0010008: endosome membrane	3.11E-02
32	GO:0005789: endoplasmic reticulum membrane	3.27E-02
33	GO:0012505: endomembrane system	3.39E-02
34	GO:0005618: cell wall	3.58E-02
35	GO:0009543: chloroplast thylakoid lumen	4.07E-02