Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G05160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0006592: ornithine biosynthetic process0.00E+00
5GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
6GO:0010055: atrichoblast differentiation0.00E+00
7GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
8GO:0080053: response to phenylalanine0.00E+00
9GO:0043201: response to leucine0.00E+00
10GO:0002376: immune system process0.00E+00
11GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
12GO:0080052: response to histidine0.00E+00
13GO:0006793: phosphorus metabolic process0.00E+00
14GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
15GO:0009617: response to bacterium7.33E-08
16GO:0010120: camalexin biosynthetic process2.49E-07
17GO:0042742: defense response to bacterium2.62E-07
18GO:0071456: cellular response to hypoxia3.62E-07
19GO:0006468: protein phosphorylation7.74E-07
20GO:0006952: defense response6.83E-06
21GO:0010150: leaf senescence6.92E-06
22GO:0010200: response to chitin5.66E-05
23GO:0070588: calcium ion transmembrane transport1.14E-04
24GO:0009697: salicylic acid biosynthetic process1.22E-04
25GO:0009751: response to salicylic acid1.44E-04
26GO:0002238: response to molecule of fungal origin1.76E-04
27GO:0006874: cellular calcium ion homeostasis1.81E-04
28GO:0009737: response to abscisic acid2.30E-04
29GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.38E-04
30GO:0006979: response to oxidative stress2.68E-04
31GO:1900056: negative regulation of leaf senescence3.09E-04
32GO:0032107: regulation of response to nutrient levels3.55E-04
33GO:0048455: stamen formation3.55E-04
34GO:1990641: response to iron ion starvation3.55E-04
35GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.55E-04
36GO:0010726: positive regulation of hydrogen peroxide metabolic process3.55E-04
37GO:0010482: regulation of epidermal cell division3.55E-04
38GO:0018343: protein farnesylation3.55E-04
39GO:1901183: positive regulation of camalexin biosynthetic process3.55E-04
40GO:0009700: indole phytoalexin biosynthetic process3.55E-04
41GO:0010230: alternative respiration3.55E-04
42GO:0042759: long-chain fatty acid biosynthetic process3.55E-04
43GO:0046244: salicylic acid catabolic process3.55E-04
44GO:0030091: protein repair3.89E-04
45GO:0010112: regulation of systemic acquired resistance5.70E-04
46GO:0032259: methylation6.23E-04
47GO:0051592: response to calcium ion7.72E-04
48GO:0080183: response to photooxidative stress7.72E-04
49GO:0006101: citrate metabolic process7.72E-04
50GO:0051788: response to misfolded protein7.72E-04
51GO:0042939: tripeptide transport7.72E-04
52GO:1902000: homogentisate catabolic process7.72E-04
53GO:0006423: cysteinyl-tRNA aminoacylation7.72E-04
54GO:0030003: cellular cation homeostasis7.72E-04
55GO:0019441: tryptophan catabolic process to kynurenine7.72E-04
56GO:0009620: response to fungus8.10E-04
57GO:0009682: induced systemic resistance9.04E-04
58GO:0009816: defense response to bacterium, incompatible interaction9.14E-04
59GO:0009627: systemic acquired resistance9.79E-04
60GO:0055114: oxidation-reduction process1.01E-03
61GO:0010351: lithium ion transport1.25E-03
62GO:0018342: protein prenylation1.25E-03
63GO:0010272: response to silver ion1.25E-03
64GO:0009072: aromatic amino acid family metabolic process1.25E-03
65GO:0048281: inflorescence morphogenesis1.25E-03
66GO:0034051: negative regulation of plant-type hypersensitive response1.25E-03
67GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.25E-03
68GO:0002237: response to molecule of bacterial origin1.31E-03
69GO:0009407: toxin catabolic process1.34E-03
70GO:0010116: positive regulation of abscisic acid biosynthetic process1.80E-03
71GO:0019438: aromatic compound biosynthetic process1.80E-03
72GO:0048194: Golgi vesicle budding1.80E-03
73GO:0002239: response to oomycetes1.80E-03
74GO:0006882: cellular zinc ion homeostasis1.80E-03
75GO:0001676: long-chain fatty acid metabolic process1.80E-03
76GO:0046513: ceramide biosynthetic process1.80E-03
77GO:0006631: fatty acid metabolic process1.99E-03
78GO:0016998: cell wall macromolecule catabolic process2.20E-03
79GO:0010483: pollen tube reception2.42E-03
80GO:0006536: glutamate metabolic process2.42E-03
81GO:0051567: histone H3-K9 methylation2.42E-03
82GO:0080142: regulation of salicylic acid biosynthetic process2.42E-03
83GO:0042938: dipeptide transport2.42E-03
84GO:0009636: response to toxic substance2.57E-03
85GO:0007166: cell surface receptor signaling pathway2.61E-03
86GO:0009625: response to insect2.63E-03
87GO:0042538: hyperosmotic salinity response2.95E-03
88GO:0006097: glyoxylate cycle3.09E-03
89GO:0000304: response to singlet oxygen3.09E-03
90GO:0010942: positive regulation of cell death3.82E-03
91GO:0010405: arabinogalactan protein metabolic process3.82E-03
92GO:0010256: endomembrane system organization3.82E-03
93GO:0043248: proteasome assembly3.82E-03
94GO:0018258: protein O-linked glycosylation via hydroxyproline3.82E-03
95GO:0006561: proline biosynthetic process3.82E-03
96GO:0000302: response to reactive oxygen species4.45E-03
97GO:0002229: defense response to oomycetes4.45E-03
98GO:0010193: response to ozone4.45E-03
99GO:0010555: response to mannitol4.60E-03
100GO:2000067: regulation of root morphogenesis4.60E-03
101GO:0071470: cellular response to osmotic stress4.60E-03
102GO:0010252: auxin homeostasis5.40E-03
103GO:0048528: post-embryonic root development5.44E-03
104GO:0006744: ubiquinone biosynthetic process5.44E-03
105GO:0030026: cellular manganese ion homeostasis5.44E-03
106GO:0019745: pentacyclic triterpenoid biosynthetic process5.44E-03
107GO:1900057: positive regulation of leaf senescence5.44E-03
108GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.44E-03
109GO:1902074: response to salt5.44E-03
110GO:0006102: isocitrate metabolic process6.32E-03
111GO:0010928: regulation of auxin mediated signaling pathway6.32E-03
112GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.32E-03
113GO:0043068: positive regulation of programmed cell death6.32E-03
114GO:0009615: response to virus6.44E-03
115GO:0043562: cellular response to nitrogen levels7.25E-03
116GO:0017004: cytochrome complex assembly7.25E-03
117GO:0009808: lignin metabolic process7.25E-03
118GO:0009699: phenylpropanoid biosynthetic process7.25E-03
119GO:0015996: chlorophyll catabolic process7.25E-03
120GO:0007186: G-protein coupled receptor signaling pathway7.25E-03
121GO:0046686: response to cadmium ion7.25E-03
122GO:0006526: arginine biosynthetic process7.25E-03
123GO:0010204: defense response signaling pathway, resistance gene-independent7.25E-03
124GO:0030968: endoplasmic reticulum unfolded protein response7.25E-03
125GO:0009611: response to wounding7.66E-03
126GO:0007338: single fertilization8.22E-03
127GO:0009821: alkaloid biosynthetic process8.22E-03
128GO:0051865: protein autoubiquitination8.22E-03
129GO:0009817: defense response to fungus, incompatible interaction8.42E-03
130GO:0010205: photoinhibition9.24E-03
131GO:0030042: actin filament depolymerization9.24E-03
132GO:0048354: mucilage biosynthetic process involved in seed coat development9.24E-03
133GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.24E-03
134GO:0008202: steroid metabolic process9.24E-03
135GO:0043069: negative regulation of programmed cell death1.03E-02
136GO:0055062: phosphate ion homeostasis1.03E-02
137GO:0007064: mitotic sister chromatid cohesion1.03E-02
138GO:0009870: defense response signaling pathway, resistance gene-dependent1.03E-02
139GO:0006032: chitin catabolic process1.03E-02
140GO:0009688: abscisic acid biosynthetic process1.03E-02
141GO:0045087: innate immune response1.07E-02
142GO:0006099: tricarboxylic acid cycle1.12E-02
143GO:0048765: root hair cell differentiation1.14E-02
144GO:0006816: calcium ion transport1.14E-02
145GO:0009089: lysine biosynthetic process via diaminopimelate1.14E-02
146GO:0000272: polysaccharide catabolic process1.14E-02
147GO:0009750: response to fructose1.14E-02
148GO:0050832: defense response to fungus1.16E-02
149GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.18E-02
150GO:0006790: sulfur compound metabolic process1.26E-02
151GO:0012501: programmed cell death1.26E-02
152GO:0015706: nitrate transport1.26E-02
153GO:0002213: defense response to insect1.26E-02
154GO:0042542: response to hydrogen peroxide1.33E-02
155GO:0007165: signal transduction1.35E-02
156GO:0009718: anthocyanin-containing compound biosynthetic process1.38E-02
157GO:0009744: response to sucrose1.38E-02
158GO:0006626: protein targeting to mitochondrion1.38E-02
159GO:2000028: regulation of photoperiodism, flowering1.38E-02
160GO:0009934: regulation of meristem structural organization1.50E-02
161GO:0010143: cutin biosynthetic process1.50E-02
162GO:0006855: drug transmembrane transport1.61E-02
163GO:0046854: phosphatidylinositol phosphorylation1.62E-02
164GO:0010053: root epidermal cell differentiation1.62E-02
165GO:0042343: indole glucosinolate metabolic process1.62E-02
166GO:0010167: response to nitrate1.62E-02
167GO:0009846: pollen germination1.74E-02
168GO:0000162: tryptophan biosynthetic process1.76E-02
169GO:0010025: wax biosynthetic process1.76E-02
170GO:0034976: response to endoplasmic reticulum stress1.76E-02
171GO:0009809: lignin biosynthetic process1.87E-02
172GO:0006486: protein glycosylation1.87E-02
173GO:0005992: trehalose biosynthetic process1.89E-02
174GO:0006487: protein N-linked glycosylation1.89E-02
175GO:0080147: root hair cell development1.89E-02
176GO:0010026: trichome differentiation2.03E-02
177GO:0098542: defense response to other organism2.17E-02
178GO:0003333: amino acid transmembrane transport2.17E-02
179GO:0031348: negative regulation of defense response2.31E-02
180GO:0019748: secondary metabolic process2.31E-02
181GO:0009814: defense response, incompatible interaction2.31E-02
182GO:0030433: ubiquitin-dependent ERAD pathway2.31E-02
183GO:0010227: floral organ abscission2.46E-02
184GO:0010584: pollen exine formation2.61E-02
185GO:0042127: regulation of cell proliferation2.61E-02
186GO:0009624: response to nematode2.66E-02
187GO:0042631: cellular response to water deprivation2.92E-02
188GO:0042391: regulation of membrane potential2.92E-02
189GO:0006814: sodium ion transport3.25E-02
190GO:0009646: response to absence of light3.25E-02
191GO:0048544: recognition of pollen3.25E-02
192GO:0009851: auxin biosynthetic process3.41E-02
193GO:0009749: response to glucose3.41E-02
194GO:0008654: phospholipid biosynthetic process3.41E-02
195GO:0006891: intra-Golgi vesicle-mediated transport3.58E-02
196GO:0030163: protein catabolic process3.93E-02
197GO:0009567: double fertilization forming a zygote and endosperm4.11E-02
198GO:0006464: cellular protein modification process4.11E-02
199GO:0006633: fatty acid biosynthetic process4.17E-02
200GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.84E-02
201GO:0010029: regulation of seed germination4.84E-02
RankGO TermAdjusted P value
1GO:0016504: peptidase activator activity0.00E+00
2GO:0004660: protein farnesyltransferase activity0.00E+00
3GO:0016034: maleylacetoacetate isomerase activity0.00E+00
4GO:0004168: dolichol kinase activity0.00E+00
5GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
6GO:0070577: lysine-acetylated histone binding0.00E+00
7GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
8GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
9GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
10GO:0008777: acetylornithine deacetylase activity0.00E+00
11GO:0016301: kinase activity7.51E-08
12GO:0004674: protein serine/threonine kinase activity1.29E-07
13GO:0005524: ATP binding1.58E-07
14GO:0102391: decanoate--CoA ligase activity5.00E-06
15GO:0004467: long-chain fatty acid-CoA ligase activity8.00E-06
16GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.55E-05
17GO:0010279: indole-3-acetic acid amido synthetase activity7.81E-05
18GO:0005388: calcium-transporting ATPase activity7.95E-05
19GO:0005516: calmodulin binding1.06E-04
20GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.38E-04
21GO:0050660: flavin adenine dinucleotide binding2.62E-04
22GO:0004364: glutathione transferase activity3.17E-04
23GO:0004425: indole-3-glycerol-phosphate synthase activity3.55E-04
24GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.55E-04
25GO:0010285: L,L-diaminopimelate aminotransferase activity3.55E-04
26GO:0031957: very long-chain fatty acid-CoA ligase activity3.55E-04
27GO:0004103: choline kinase activity7.72E-04
28GO:0050291: sphingosine N-acyltransferase activity7.72E-04
29GO:0003994: aconitate hydratase activity7.72E-04
30GO:0004817: cysteine-tRNA ligase activity7.72E-04
31GO:0032934: sterol binding7.72E-04
32GO:0004061: arylformamidase activity7.72E-04
33GO:0004775: succinate-CoA ligase (ADP-forming) activity7.72E-04
34GO:0015036: disulfide oxidoreductase activity7.72E-04
35GO:0042937: tripeptide transporter activity7.72E-04
36GO:0050736: O-malonyltransferase activity7.72E-04
37GO:0004776: succinate-CoA ligase (GDP-forming) activity7.72E-04
38GO:0009055: electron carrier activity7.83E-04
39GO:0008171: O-methyltransferase activity7.85E-04
40GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.12E-03
41GO:0005262: calcium channel activity1.17E-03
42GO:0001664: G-protein coupled receptor binding1.25E-03
43GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.25E-03
44GO:0031683: G-protein beta/gamma-subunit complex binding1.25E-03
45GO:0004383: guanylate cyclase activity1.25E-03
46GO:0016805: dipeptidase activity1.25E-03
47GO:0004190: aspartic-type endopeptidase activity1.47E-03
48GO:0004970: ionotropic glutamate receptor activity1.47E-03
49GO:0005217: intracellular ligand-gated ion channel activity1.47E-03
50GO:0004351: glutamate decarboxylase activity1.80E-03
51GO:0001653: peptide receptor activity1.80E-03
52GO:0042299: lupeol synthase activity1.80E-03
53GO:0015368: calcium:cation antiporter activity2.42E-03
54GO:0004737: pyruvate decarboxylase activity2.42E-03
55GO:0042936: dipeptide transporter activity2.42E-03
56GO:0015369: calcium:proton antiporter activity2.42E-03
57GO:0070628: proteasome binding2.42E-03
58GO:0004031: aldehyde oxidase activity2.42E-03
59GO:0050302: indole-3-acetaldehyde oxidase activity2.42E-03
60GO:0016866: intramolecular transferase activity2.42E-03
61GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity3.09E-03
62GO:0004040: amidase activity3.09E-03
63GO:0031386: protein tag3.09E-03
64GO:0030246: carbohydrate binding3.81E-03
65GO:0030976: thiamine pyrophosphate binding3.82E-03
66GO:0004605: phosphatidate cytidylyltransferase activity3.82E-03
67GO:1990714: hydroxyproline O-galactosyltransferase activity3.82E-03
68GO:0031593: polyubiquitin binding3.82E-03
69GO:0047714: galactolipase activity3.82E-03
70GO:0004029: aldehyde dehydrogenase (NAD) activity3.82E-03
71GO:0008168: methyltransferase activity3.91E-03
72GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.60E-03
73GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.60E-03
74GO:0004012: phospholipid-translocating ATPase activity4.60E-03
75GO:0005261: cation channel activity4.60E-03
76GO:0004656: procollagen-proline 4-dioxygenase activity4.60E-03
77GO:0016831: carboxy-lyase activity5.44E-03
78GO:0008235: metalloexopeptidase activity5.44E-03
79GO:0004564: beta-fructofuranosidase activity6.32E-03
80GO:0052747: sinapyl alcohol dehydrogenase activity6.32E-03
81GO:0004311: farnesyltranstransferase activity6.32E-03
82GO:0004033: aldo-keto reductase (NADP) activity6.32E-03
83GO:0015491: cation:cation antiporter activity6.32E-03
84GO:0005509: calcium ion binding7.24E-03
85GO:0008142: oxysterol binding7.25E-03
86GO:0008970: phosphatidylcholine 1-acylhydrolase activity7.25E-03
87GO:0030247: polysaccharide binding7.59E-03
88GO:0005506: iron ion binding8.22E-03
89GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen8.51E-03
90GO:0015238: drug transmembrane transporter activity8.84E-03
91GO:0030955: potassium ion binding9.24E-03
92GO:0016844: strictosidine synthase activity9.24E-03
93GO:0015112: nitrate transmembrane transporter activity9.24E-03
94GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity9.24E-03
95GO:0004743: pyruvate kinase activity9.24E-03
96GO:0004575: sucrose alpha-glucosidase activity9.24E-03
97GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.32E-03
98GO:0004568: chitinase activity1.03E-02
99GO:0005215: transporter activity1.03E-02
100GO:0004713: protein tyrosine kinase activity1.03E-02
101GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.07E-02
102GO:0004177: aminopeptidase activity1.14E-02
103GO:0008378: galactosyltransferase activity1.26E-02
104GO:0045551: cinnamyl-alcohol dehydrogenase activity1.26E-02
105GO:0004022: alcohol dehydrogenase (NAD) activity1.38E-02
106GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.38E-02
107GO:0051537: 2 iron, 2 sulfur cluster binding1.50E-02
108GO:0030552: cAMP binding1.62E-02
109GO:0004867: serine-type endopeptidase inhibitor activity1.62E-02
110GO:0030553: cGMP binding1.62E-02
111GO:0008061: chitin binding1.62E-02
112GO:0000287: magnesium ion binding1.74E-02
113GO:0031418: L-ascorbic acid binding1.89E-02
114GO:0001046: core promoter sequence-specific DNA binding1.89E-02
115GO:0043531: ADP binding2.00E-02
116GO:0005216: ion channel activity2.03E-02
117GO:0003756: protein disulfide isomerase activity2.61E-02
118GO:0004499: N,N-dimethylaniline monooxygenase activity2.61E-02
119GO:0015035: protein disulfide oxidoreductase activity2.74E-02
120GO:0005249: voltage-gated potassium channel activity2.92E-02
121GO:0030551: cyclic nucleotide binding2.92E-02
122GO:0004871: signal transducer activity3.09E-02
123GO:0016758: transferase activity, transferring hexosyl groups3.24E-02
124GO:0030170: pyridoxal phosphate binding3.69E-02
125GO:0008565: protein transporter activity3.98E-02
126GO:0019825: oxygen binding4.12E-02
127GO:0005507: copper ion binding4.12E-02
128GO:0008483: transaminase activity4.29E-02
129GO:0008237: metallopeptidase activity4.29E-02
130GO:0015297: antiporter activity4.37E-02
131GO:0051213: dioxygenase activity4.65E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.94E-08
2GO:0005783: endoplasmic reticulum7.21E-08
3GO:0016021: integral component of membrane5.99E-07
4GO:0005829: cytosol7.30E-06
5GO:0005965: protein farnesyltransferase complex3.55E-04
6GO:0031314: extrinsic component of mitochondrial inner membrane7.72E-04
7GO:0030660: Golgi-associated vesicle membrane2.42E-03
8GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.42E-03
9GO:0005746: mitochondrial respiratory chain3.09E-03
10GO:0008250: oligosaccharyltransferase complex3.09E-03
11GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane6.32E-03
12GO:0005789: endoplasmic reticulum membrane6.95E-03
13GO:0008540: proteasome regulatory particle, base subcomplex9.24E-03
14GO:0005765: lysosomal membrane1.14E-02
15GO:0005795: Golgi stack1.62E-02
16GO:0030176: integral component of endoplasmic reticulum membrane1.62E-02
17GO:0005887: integral component of plasma membrane1.65E-02
18GO:0005839: proteasome core complex2.17E-02
19GO:0005834: heterotrimeric G-protein complex2.35E-02
20GO:0015629: actin cytoskeleton2.46E-02
21GO:0005576: extracellular region2.81E-02
22GO:0043231: intracellular membrane-bounded organelle4.27E-02
23GO:0009705: plant-type vacuole membrane4.58E-02
24GO:0005788: endoplasmic reticulum lumen4.84E-02
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Gene type



Gene DE type