GO Enrichment Analysis of Co-expressed Genes with
AT4G05090
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0042304: regulation of fatty acid biosynthetic process | 0.00E+00 |
| 3 | GO:0006223: uracil salvage | 0.00E+00 |
| 4 | GO:2000013: regulation of arginine biosynthetic process via ornithine | 0.00E+00 |
| 5 | GO:0042371: vitamin K biosynthetic process | 0.00E+00 |
| 6 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 7 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 8 | GO:0042254: ribosome biogenesis | 4.82E-08 |
| 9 | GO:0006412: translation | 4.14E-07 |
| 10 | GO:0000413: protein peptidyl-prolyl isomerization | 2.34E-05 |
| 11 | GO:0015979: photosynthesis | 4.47E-05 |
| 12 | GO:0045454: cell redox homeostasis | 4.98E-05 |
| 13 | GO:1904966: positive regulation of vitamin E biosynthetic process | 9.33E-05 |
| 14 | GO:1904964: positive regulation of phytol biosynthetic process | 9.33E-05 |
| 15 | GO:0043085: positive regulation of catalytic activity | 1.37E-04 |
| 16 | GO:0009735: response to cytokinin | 2.13E-04 |
| 17 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.20E-04 |
| 18 | GO:0010581: regulation of starch biosynthetic process | 3.67E-04 |
| 19 | GO:0071492: cellular response to UV-A | 3.67E-04 |
| 20 | GO:0006457: protein folding | 4.10E-04 |
| 21 | GO:0006165: nucleoside diphosphate phosphorylation | 5.28E-04 |
| 22 | GO:0006228: UTP biosynthetic process | 5.28E-04 |
| 23 | GO:0010088: phloem development | 5.28E-04 |
| 24 | GO:0006986: response to unfolded protein | 5.28E-04 |
| 25 | GO:2001141: regulation of RNA biosynthetic process | 5.28E-04 |
| 26 | GO:0051085: chaperone mediated protein folding requiring cofactor | 5.28E-04 |
| 27 | GO:0006241: CTP biosynthetic process | 5.28E-04 |
| 28 | GO:0044206: UMP salvage | 7.02E-04 |
| 29 | GO:2000122: negative regulation of stomatal complex development | 7.02E-04 |
| 30 | GO:0010037: response to carbon dioxide | 7.02E-04 |
| 31 | GO:0006808: regulation of nitrogen utilization | 7.02E-04 |
| 32 | GO:0015976: carbon utilization | 7.02E-04 |
| 33 | GO:0071486: cellular response to high light intensity | 7.02E-04 |
| 34 | GO:0006183: GTP biosynthetic process | 7.02E-04 |
| 35 | GO:0043097: pyrimidine nucleoside salvage | 8.88E-04 |
| 36 | GO:0000304: response to singlet oxygen | 8.88E-04 |
| 37 | GO:0010236: plastoquinone biosynthetic process | 8.88E-04 |
| 38 | GO:0006206: pyrimidine nucleobase metabolic process | 1.08E-03 |
| 39 | GO:0010190: cytochrome b6f complex assembly | 1.08E-03 |
| 40 | GO:0042549: photosystem II stabilization | 1.08E-03 |
| 41 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.08E-03 |
| 42 | GO:0042372: phylloquinone biosynthetic process | 1.29E-03 |
| 43 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.29E-03 |
| 44 | GO:0009854: oxidative photosynthetic carbon pathway | 1.29E-03 |
| 45 | GO:0010555: response to mannitol | 1.29E-03 |
| 46 | GO:0010196: nonphotochemical quenching | 1.51E-03 |
| 47 | GO:0009772: photosynthetic electron transport in photosystem II | 1.51E-03 |
| 48 | GO:0009642: response to light intensity | 1.75E-03 |
| 49 | GO:0009657: plastid organization | 2.00E-03 |
| 50 | GO:0019430: removal of superoxide radicals | 2.00E-03 |
| 51 | GO:0032544: plastid translation | 2.00E-03 |
| 52 | GO:0009932: cell tip growth | 2.00E-03 |
| 53 | GO:0071482: cellular response to light stimulus | 2.00E-03 |
| 54 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.25E-03 |
| 55 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.52E-03 |
| 56 | GO:0048829: root cap development | 2.80E-03 |
| 57 | GO:0009773: photosynthetic electron transport in photosystem I | 3.09E-03 |
| 58 | GO:0019684: photosynthesis, light reaction | 3.09E-03 |
| 59 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.09E-03 |
| 60 | GO:0009073: aromatic amino acid family biosynthetic process | 3.09E-03 |
| 61 | GO:0006352: DNA-templated transcription, initiation | 3.09E-03 |
| 62 | GO:0006807: nitrogen compound metabolic process | 3.69E-03 |
| 63 | GO:0006006: glucose metabolic process | 3.69E-03 |
| 64 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.69E-03 |
| 65 | GO:0010020: chloroplast fission | 4.01E-03 |
| 66 | GO:0010207: photosystem II assembly | 4.01E-03 |
| 67 | GO:0010143: cutin biosynthetic process | 4.01E-03 |
| 68 | GO:0042742: defense response to bacterium | 4.05E-03 |
| 69 | GO:0006833: water transport | 4.67E-03 |
| 70 | GO:0000027: ribosomal large subunit assembly | 5.01E-03 |
| 71 | GO:0019344: cysteine biosynthetic process | 5.01E-03 |
| 72 | GO:0009116: nucleoside metabolic process | 5.01E-03 |
| 73 | GO:0031408: oxylipin biosynthetic process | 5.72E-03 |
| 74 | GO:0003333: amino acid transmembrane transport | 5.72E-03 |
| 75 | GO:0006633: fatty acid biosynthetic process | 6.26E-03 |
| 76 | GO:0009411: response to UV | 6.47E-03 |
| 77 | GO:0042335: cuticle development | 7.65E-03 |
| 78 | GO:0034220: ion transmembrane transport | 7.65E-03 |
| 79 | GO:0006662: glycerol ether metabolic process | 8.06E-03 |
| 80 | GO:0055085: transmembrane transport | 9.65E-03 |
| 81 | GO:0032502: developmental process | 9.78E-03 |
| 82 | GO:0009658: chloroplast organization | 1.07E-02 |
| 83 | GO:0010027: thylakoid membrane organization | 1.21E-02 |
| 84 | GO:0055114: oxidation-reduction process | 1.23E-02 |
| 85 | GO:0015995: chlorophyll biosynthetic process | 1.36E-02 |
| 86 | GO:0010411: xyloglucan metabolic process | 1.36E-02 |
| 87 | GO:0016311: dephosphorylation | 1.41E-02 |
| 88 | GO:0018298: protein-chromophore linkage | 1.46E-02 |
| 89 | GO:0009407: toxin catabolic process | 1.56E-02 |
| 90 | GO:0010119: regulation of stomatal movement | 1.62E-02 |
| 91 | GO:0006865: amino acid transport | 1.67E-02 |
| 92 | GO:0009637: response to blue light | 1.73E-02 |
| 93 | GO:0009853: photorespiration | 1.73E-02 |
| 94 | GO:0034599: cellular response to oxidative stress | 1.78E-02 |
| 95 | GO:0030001: metal ion transport | 1.89E-02 |
| 96 | GO:0042542: response to hydrogen peroxide | 2.01E-02 |
| 97 | GO:0010114: response to red light | 2.07E-02 |
| 98 | GO:0009744: response to sucrose | 2.07E-02 |
| 99 | GO:0051707: response to other organism | 2.07E-02 |
| 100 | GO:0042546: cell wall biogenesis | 2.13E-02 |
| 101 | GO:0009644: response to high light intensity | 2.18E-02 |
| 102 | GO:0009636: response to toxic substance | 2.24E-02 |
| 103 | GO:0009585: red, far-red light phototransduction | 2.55E-02 |
| 104 | GO:0009734: auxin-activated signaling pathway | 2.76E-02 |
| 105 | GO:0009416: response to light stimulus | 3.47E-02 |
| 106 | GO:0042744: hydrogen peroxide catabolic process | 4.22E-02 |
| 107 | GO:0016036: cellular response to phosphate starvation | 4.61E-02 |
| 108 | GO:0045490: pectin catabolic process | 4.84E-02 |
| 109 | GO:0009451: RNA modification | 4.92E-02 |
| 110 | GO:0009793: embryo development ending in seed dormancy | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 2 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 3 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 6 | GO:0010307: acetylglutamate kinase regulator activity | 0.00E+00 |
| 7 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 8 | GO:0019843: rRNA binding | 2.42E-14 |
| 9 | GO:0003735: structural constituent of ribosome | 2.23E-09 |
| 10 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.45E-07 |
| 11 | GO:0004659: prenyltransferase activity | 7.97E-06 |
| 12 | GO:0051920: peroxiredoxin activity | 2.87E-05 |
| 13 | GO:0016209: antioxidant activity | 5.09E-05 |
| 14 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 9.33E-05 |
| 15 | GO:0008047: enzyme activator activity | 1.16E-04 |
| 16 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 2.20E-04 |
| 17 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.20E-04 |
| 18 | GO:0050734: hydroxycinnamoyltransferase activity | 3.67E-04 |
| 19 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 3.67E-04 |
| 20 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 3.67E-04 |
| 21 | GO:0022891: substrate-specific transmembrane transporter activity | 4.25E-04 |
| 22 | GO:0004550: nucleoside diphosphate kinase activity | 5.28E-04 |
| 23 | GO:0008097: 5S rRNA binding | 5.28E-04 |
| 24 | GO:0004791: thioredoxin-disulfide reductase activity | 6.22E-04 |
| 25 | GO:0010328: auxin influx transmembrane transporter activity | 7.02E-04 |
| 26 | GO:0043495: protein anchor | 7.02E-04 |
| 27 | GO:0001053: plastid sigma factor activity | 7.02E-04 |
| 28 | GO:0004845: uracil phosphoribosyltransferase activity | 7.02E-04 |
| 29 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 7.02E-04 |
| 30 | GO:0016836: hydro-lyase activity | 7.02E-04 |
| 31 | GO:0016987: sigma factor activity | 7.02E-04 |
| 32 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.05E-04 |
| 33 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 8.88E-04 |
| 34 | GO:0016168: chlorophyll binding | 1.07E-03 |
| 35 | GO:0004849: uridine kinase activity | 1.29E-03 |
| 36 | GO:0019899: enzyme binding | 1.51E-03 |
| 37 | GO:0047617: acyl-CoA hydrolase activity | 2.52E-03 |
| 38 | GO:0004089: carbonate dehydratase activity | 3.69E-03 |
| 39 | GO:0008266: poly(U) RNA binding | 4.01E-03 |
| 40 | GO:0005528: FK506 binding | 5.01E-03 |
| 41 | GO:0051087: chaperone binding | 5.36E-03 |
| 42 | GO:0030570: pectate lyase activity | 6.47E-03 |
| 43 | GO:0047134: protein-disulfide reductase activity | 7.25E-03 |
| 44 | GO:0008080: N-acetyltransferase activity | 8.06E-03 |
| 45 | GO:0050662: coenzyme binding | 8.47E-03 |
| 46 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 9.33E-03 |
| 47 | GO:0004601: peroxidase activity | 1.07E-02 |
| 48 | GO:0016788: hydrolase activity, acting on ester bonds | 1.09E-02 |
| 49 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.11E-02 |
| 50 | GO:0015250: water channel activity | 1.21E-02 |
| 51 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.36E-02 |
| 52 | GO:0052689: carboxylic ester hydrolase activity | 1.46E-02 |
| 53 | GO:0042803: protein homodimerization activity | 1.66E-02 |
| 54 | GO:0003993: acid phosphatase activity | 1.78E-02 |
| 55 | GO:0050661: NADP binding | 1.89E-02 |
| 56 | GO:0004364: glutathione transferase activity | 2.01E-02 |
| 57 | GO:0009055: electron carrier activity | 2.10E-02 |
| 58 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.18E-02 |
| 59 | GO:0043621: protein self-association | 2.18E-02 |
| 60 | GO:0015293: symporter activity | 2.24E-02 |
| 61 | GO:0016491: oxidoreductase activity | 2.47E-02 |
| 62 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.55E-02 |
| 63 | GO:0015171: amino acid transmembrane transporter activity | 2.75E-02 |
| 64 | GO:0003723: RNA binding | 3.16E-02 |
| 65 | GO:0051082: unfolded protein binding | 3.28E-02 |
| 66 | GO:0015035: protein disulfide oxidoreductase activity | 3.35E-02 |
| 67 | GO:0005507: copper ion binding | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 6.62E-34 |
| 3 | GO:0009570: chloroplast stroma | 3.88E-29 |
| 4 | GO:0009941: chloroplast envelope | 2.70E-21 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 7.33E-14 |
| 6 | GO:0009579: thylakoid | 8.03E-14 |
| 7 | GO:0031977: thylakoid lumen | 1.11E-12 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 6.67E-11 |
| 9 | GO:0005840: ribosome | 1.72E-08 |
| 10 | GO:0009534: chloroplast thylakoid | 3.64E-07 |
| 11 | GO:0009547: plastid ribosome | 9.33E-05 |
| 12 | GO:0000312: plastid small ribosomal subunit | 2.08E-04 |
| 13 | GO:0042651: thylakoid membrane | 3.24E-04 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 3.24E-04 |
| 15 | GO:0009523: photosystem II | 6.66E-04 |
| 16 | GO:0019898: extrinsic component of membrane | 6.66E-04 |
| 17 | GO:0010319: stromule | 9.05E-04 |
| 18 | GO:0022626: cytosolic ribosome | 1.30E-03 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.25E-03 |
| 20 | GO:0000311: plastid large ribosomal subunit | 3.38E-03 |
| 21 | GO:0030095: chloroplast photosystem II | 4.01E-03 |
| 22 | GO:0016020: membrane | 4.37E-03 |
| 23 | GO:0043234: protein complex | 4.67E-03 |
| 24 | GO:0009536: plastid | 5.52E-03 |
| 25 | GO:0015935: small ribosomal subunit | 5.72E-03 |
| 26 | GO:0048046: apoplast | 8.60E-03 |
| 27 | GO:0022627: cytosolic small ribosomal subunit | 9.11E-03 |
| 28 | GO:0046658: anchored component of plasma membrane | 9.11E-03 |
| 29 | GO:0031225: anchored component of membrane | 1.25E-02 |
| 30 | GO:0031969: chloroplast membrane | 1.32E-02 |
| 31 | GO:0022625: cytosolic large ribosomal subunit | 1.39E-02 |
| 32 | GO:0015934: large ribosomal subunit | 1.62E-02 |
| 33 | GO:0009706: chloroplast inner membrane | 3.28E-02 |
| 34 | GO:0005777: peroxisome | 3.98E-02 |
| 35 | GO:0005759: mitochondrial matrix | 4.53E-02 |