Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G04960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046865: terpenoid transport0.00E+00
2GO:0006556: S-adenosylmethionine biosynthetic process6.16E-05
3GO:0080168: abscisic acid transport6.16E-05
4GO:0034051: negative regulation of plant-type hypersensitive response6.16E-05
5GO:0015692: lead ion transport6.16E-05
6GO:0006536: glutamate metabolic process1.30E-04
7GO:0009643: photosynthetic acclimation2.10E-04
8GO:0048658: anther wall tapetum development3.46E-04
9GO:0010497: plasmodesmata-mediated intercellular transport3.94E-04
10GO:0080144: amino acid homeostasis4.45E-04
11GO:2000280: regulation of root development4.96E-04
12GO:0006006: glucose metabolic process7.14E-04
13GO:0009409: response to cold1.04E-03
14GO:0080167: response to karrikin1.11E-03
15GO:0006730: one-carbon metabolic process1.14E-03
16GO:0010200: response to chitin1.15E-03
17GO:0005975: carbohydrate metabolic process1.20E-03
18GO:0009693: ethylene biosynthetic process1.21E-03
19GO:0080022: primary root development1.41E-03
20GO:0006885: regulation of pH1.48E-03
21GO:0009741: response to brassinosteroid1.48E-03
22GO:0006623: protein targeting to vacuole1.63E-03
23GO:0002229: defense response to oomycetes1.70E-03
24GO:0010193: response to ozone1.70E-03
25GO:0071281: cellular response to iron ion1.86E-03
26GO:0009631: cold acclimation2.87E-03
27GO:0009611: response to wounding2.89E-03
28GO:0006631: fatty acid metabolic process3.43E-03
29GO:0009636: response to toxic substance3.93E-03
30GO:0006855: drug transmembrane transport4.03E-03
31GO:0006812: cation transport4.23E-03
32GO:0042538: hyperosmotic salinity response4.23E-03
33GO:0006813: potassium ion transport4.44E-03
34GO:0010224: response to UV-B4.55E-03
35GO:0006096: glycolytic process4.98E-03
36GO:0009620: response to fungus5.32E-03
37GO:0042545: cell wall modification5.54E-03
38GO:0006979: response to oxidative stress5.72E-03
39GO:0018105: peptidyl-serine phosphorylation5.77E-03
40GO:0042744: hydrogen peroxide catabolic process7.23E-03
41GO:0006633: fatty acid biosynthetic process7.74E-03
42GO:0045490: pectin catabolic process8.26E-03
43GO:0009617: response to bacterium9.35E-03
44GO:0009723: response to ethylene1.24E-02
45GO:0046777: protein autophosphorylation1.37E-02
46GO:0032259: methylation1.67E-02
47GO:0009751: response to salicylic acid1.70E-02
48GO:0009408: response to heat1.72E-02
49GO:0009753: response to jasmonic acid1.81E-02
50GO:0009651: response to salt stress1.91E-02
51GO:0009735: response to cytokinin2.43E-02
52GO:0009738: abscisic acid-activated signaling pathway2.53E-02
53GO:0009555: pollen development2.59E-02
54GO:0009416: response to light stimulus2.59E-02
55GO:0035556: intracellular signal transduction2.69E-02
56GO:0045893: positive regulation of transcription, DNA-templated2.86E-02
57GO:0042742: defense response to bacterium4.29E-02
58GO:0006468: protein phosphorylation4.40E-02
RankGO TermAdjusted P value
1GO:0051670: inulinase activity0.00E+00
2GO:0051669: fructan beta-fructosidase activity1.30E-05
3GO:0031219: levanase activity1.30E-05
4GO:0050736: O-malonyltransferase activity3.42E-05
5GO:0004478: methionine adenosyltransferase activity6.16E-05
6GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity9.36E-05
7GO:0004351: glutamate decarboxylase activity9.36E-05
8GO:0102391: decanoate--CoA ligase activity2.53E-04
9GO:0004467: long-chain fatty acid-CoA ligase activity2.99E-04
10GO:0004564: beta-fructofuranosidase activity3.46E-04
11GO:0004575: sucrose alpha-glucosidase activity4.96E-04
12GO:0005451: monovalent cation:proton antiporter activity1.41E-03
13GO:0015299: solute:proton antiporter activity1.56E-03
14GO:0015385: sodium:proton antiporter activity1.86E-03
15GO:0009931: calcium-dependent protein serine/threonine kinase activity2.35E-03
16GO:0004683: calmodulin-dependent protein kinase activity2.43E-03
17GO:0030145: manganese ion binding2.87E-03
18GO:0050661: NADP binding3.33E-03
19GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.71E-03
20GO:0005507: copper ion binding4.00E-03
21GO:0051287: NAD binding4.13E-03
22GO:0005516: calmodulin binding4.23E-03
23GO:0045330: aspartyl esterase activity4.76E-03
24GO:0045735: nutrient reservoir activity4.98E-03
25GO:0030599: pectinesterase activity5.43E-03
26GO:0005524: ATP binding6.83E-03
27GO:0030170: pyridoxal phosphate binding7.10E-03
28GO:0046910: pectinesterase inhibitor activity7.87E-03
29GO:0042626: ATPase activity, coupled to transmembrane movement of substances9.77E-03
30GO:0008168: methyltransferase activity1.09E-02
31GO:0004601: peroxidase activity1.12E-02
32GO:0052689: carboxylic ester hydrolase activity1.40E-02
33GO:0042803: protein homodimerization activity1.53E-02
34GO:0046872: metal ion binding1.93E-02
35GO:0016887: ATPase activity2.35E-02
36GO:0004674: protein serine/threonine kinase activity2.81E-02
37GO:0043565: sequence-specific DNA binding2.92E-02
38GO:0016740: transferase activity2.99E-02
39GO:0005509: calcium ion binding4.05E-02
RankGO TermAdjusted P value
1GO:0005618: cell wall9.05E-05
2GO:0048046: apoplast5.94E-04
3GO:0005770: late endosome1.48E-03
4GO:0071944: cell periphery1.86E-03
5GO:0005576: extracellular region2.07E-02
6GO:0005886: plasma membrane2.71E-02
7GO:0009536: plastid4.95E-02
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Gene type



Gene DE type