co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G03210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901485: positive regulation of transcription factor catabolic process	0.00E+00
2	GO:0031508: pericentric heterochromatin assembly	0.00E+00
3	GO:0080094: response to trehalose-6-phosphate	0.00E+00
4	GO:0010424: DNA methylation on cytosine within a CG sequence	2.06E-07
5	GO:0000271: polysaccharide biosynthetic process	8.72E-06
6	GO:0045489: pectin biosynthetic process	9.93E-06
7	GO:0045010: actin nucleation	2.51E-05
8	GO:0006169: adenosine salvage	5.94E-05
9	GO:0042547: cell wall modification involved in multidimensional cell growth	5.94E-05
10	GO:0019354: siroheme biosynthetic process	5.94E-05
11	GO:0010216: maintenance of DNA methylation	7.05E-05
12	GO:0090309: positive regulation of methylation-dependent chromatin silencing	1.44E-04
13	GO:2000123: positive regulation of stomatal complex development	1.44E-04
14	GO:0010069: zygote asymmetric cytokinesis in embryo sac	1.44E-04
15	GO:0006065: UDP-glucuronate biosynthetic process	2.46E-04
16	GO:0032776: DNA methylation on cytosine	2.46E-04
17	GO:0032456: endocytic recycling	3.57E-04
18	GO:0051016: barbed-end actin filament capping	3.57E-04
19	GO:2000038: regulation of stomatal complex development	4.78E-04
20	GO:0007267: cell-cell signaling	5.12E-04
21	GO:0044209: AMP salvage	6.05E-04
22	GO:0010375: stomatal complex patterning	6.05E-04
23	GO:0010411: xyloglucan metabolic process	6.71E-04
24	GO:1900425: negative regulation of defense response to bacterium	7.40E-04
25	GO:0009612: response to mechanical stimulus	8.82E-04
26	GO:0009554: megasporogenesis	8.82E-04
27	GO:0016051: carbohydrate biosynthetic process	9.27E-04
28	GO:0009645: response to low light intensity stimulus	1.03E-03
29	GO:0051510: regulation of unidimensional cell growth	1.03E-03
30	GO:0052543: callose deposition in cell wall	1.18E-03
31	GO:0042546: cell wall biogenesis	1.22E-03
32	GO:0009932: cell tip growth	1.35E-03
33	GO:0071555: cell wall organization	1.62E-03
34	GO:0006349: regulation of gene expression by genetic imprinting	1.69E-03
35	GO:0006779: porphyrin-containing compound biosynthetic process	1.69E-03
36	GO:0043069: negative regulation of programmed cell death	1.88E-03
37	GO:0006325: chromatin organization	1.88E-03
38	GO:0000038: very long-chain fatty acid metabolic process	2.07E-03
39	GO:0016569: covalent chromatin modification	2.09E-03
40	GO:0016024: CDP-diacylglycerol biosynthetic process	2.27E-03
41	GO:0030036: actin cytoskeleton organization	2.47E-03
42	GO:0010143: cutin biosynthetic process	2.68E-03
43	GO:0009969: xyloglucan biosynthetic process	2.89E-03
44	GO:0006833: water transport	3.11E-03
45	GO:0006633: fatty acid biosynthetic process	3.46E-03
46	GO:0009814: defense response, incompatible interaction	4.05E-03
47	GO:0009294: DNA mediated transformation	4.30E-03
48	GO:0040007: growth	4.30E-03
49	GO:0007166: cell surface receptor signaling pathway	4.34E-03
50	GO:0019722: calcium-mediated signaling	4.55E-03
51	GO:0034220: ion transmembrane transport	5.07E-03
52	GO:0009741: response to brassinosteroid	5.34E-03
53	GO:0009826: unidimensional cell growth	5.65E-03
54	GO:0009791: post-embryonic development	5.89E-03
55	GO:0010583: response to cyclopentenone	6.46E-03
56	GO:0016032: viral process	6.46E-03
57	GO:0010090: trichome morphogenesis	6.75E-03
58	GO:0080167: response to karrikin	7.26E-03
59	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	7.51E-03
60	GO:0016126: sterol biosynthetic process	7.97E-03
61	GO:0016311: dephosphorylation	9.25E-03
62	GO:0048767: root hair elongation	9.93E-03
63	GO:0007568: aging	1.06E-02
64	GO:0009910: negative regulation of flower development	1.06E-02
65	GO:0006486: protein glycosylation	1.67E-02
66	GO:0051603: proteolysis involved in cellular protein catabolic process	1.71E-02
67	GO:0055114: oxidation-reduction process	1.85E-02
68	GO:0009742: brassinosteroid mediated signaling pathway	2.24E-02
69	GO:0040008: regulation of growth	3.07E-02
70	GO:0045490: pectin catabolic process	3.17E-02
71	GO:0006468: protein phosphorylation	3.51E-02
72	GO:0009733: response to auxin	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0004851: uroporphyrin-III C-methyltransferase activity	0.00E+00
2	GO:0050613: delta14-sterol reductase activity	0.00E+00
3	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.17E-05
4	GO:0004001: adenosine kinase activity	5.94E-05
5	GO:0080132: fatty acid alpha-hydroxylase activity	5.94E-05
6	GO:0005507: copper ion binding	1.54E-04
7	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.14E-04
8	GO:0010429: methyl-CpNpN binding	2.46E-04
9	GO:0003979: UDP-glucose 6-dehydrogenase activity	2.46E-04
10	GO:0010428: methyl-CpNpG binding	2.46E-04
11	GO:0016758: transferase activity, transferring hexosyl groups	2.82E-04
12	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	3.57E-04
13	GO:0001872: (1->3)-beta-D-glucan binding	3.57E-04
14	GO:0033843: xyloglucan 6-xylosyltransferase activity	3.57E-04
15	GO:0010385: double-stranded methylated DNA binding	4.78E-04
16	GO:0009922: fatty acid elongase activity	6.05E-04
17	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	7.40E-04
18	GO:0035252: UDP-xylosyltransferase activity	7.40E-04
19	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	7.40E-04
20	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	8.82E-04
21	GO:0019900: kinase binding	8.82E-04
22	GO:0008327: methyl-CpG binding	2.07E-03
23	GO:0004672: protein kinase activity	2.90E-03
24	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.11E-03
25	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.11E-03
26	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.11E-03
27	GO:0008134: transcription factor binding	3.34E-03
28	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.55E-03
29	GO:0030570: pectate lyase activity	4.30E-03
30	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.73E-03
31	GO:0008168: methyltransferase activity	5.65E-03
32	GO:0019901: protein kinase binding	5.89E-03
33	GO:0016762: xyloglucan:xyloglucosyl transferase activity	6.17E-03
34	GO:0003682: chromatin binding	6.20E-03
35	GO:0051015: actin filament binding	6.75E-03
36	GO:0016791: phosphatase activity	7.05E-03
37	GO:0016759: cellulose synthase activity	7.05E-03
38	GO:0015250: water channel activity	7.97E-03
39	GO:0030247: polysaccharide binding	8.92E-03
40	GO:0016798: hydrolase activity, acting on glycosyl bonds	8.92E-03
41	GO:0016757: transferase activity, transferring glycosyl groups	1.04E-02
42	GO:0042393: histone binding	1.24E-02
43	GO:0004185: serine-type carboxypeptidase activity	1.35E-02
44	GO:0051287: NAD binding	1.55E-02
45	GO:0016298: lipase activity	1.71E-02
46	GO:0003779: actin binding	2.10E-02
47	GO:0016746: transferase activity, transferring acyl groups	2.19E-02
48	GO:0016740: transferase activity	2.33E-02
49	GO:0016829: lyase activity	2.67E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	7.73E-15
2	GO:0009505: plant-type cell wall	2.03E-09
3	GO:0046658: anchored component of plasma membrane	2.86E-09
4	GO:0048046: apoplast	3.23E-06
5	GO:0005576: extracellular region	4.71E-06
6	GO:0009506: plasmodesma	1.25E-05
7	GO:0005886: plasma membrane	8.42E-05
8	GO:0000139: Golgi membrane	8.78E-05
9	GO:0035619: root hair tip	3.57E-04
10	GO:0005794: Golgi apparatus	6.44E-04
11	GO:0031209: SCAR complex	7.40E-04
12	GO:0032588: trans-Golgi network membrane	7.40E-04
13	GO:0010369: chromocenter	8.82E-04
14	GO:0005618: cell wall	8.88E-04
15	GO:0031901: early endosome membrane	1.52E-03
16	GO:0005720: nuclear heterochromatin	1.52E-03
17	GO:0005774: vacuolar membrane	2.74E-03
18	GO:0030176: integral component of endoplasmic reticulum membrane	2.89E-03
19	GO:0016021: integral component of membrane	5.63E-03
20	GO:0005773: vacuole	5.77E-03
21	GO:0005802: trans-Golgi network	6.06E-03
22	GO:0005768: endosome	7.13E-03
23	GO:0005856: cytoskeleton	1.47E-02
24	GO:0016020: membrane	2.49E-02
25	GO:0005615: extracellular space	3.44E-02