GO Enrichment Analysis of Co-expressed Genes with
AT4G03070
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 2 | GO:0010021: amylopectin biosynthetic process | 3.22E-06 |
| 3 | GO:0019252: starch biosynthetic process | 1.06E-05 |
| 4 | GO:0051775: response to redox state | 5.48E-05 |
| 5 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.34E-04 |
| 6 | GO:0009915: phloem sucrose loading | 1.34E-04 |
| 7 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.34E-04 |
| 8 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.34E-04 |
| 9 | GO:0016122: xanthophyll metabolic process | 1.34E-04 |
| 10 | GO:0015675: nickel cation transport | 2.28E-04 |
| 11 | GO:0051604: protein maturation | 2.28E-04 |
| 12 | GO:0006107: oxaloacetate metabolic process | 3.33E-04 |
| 13 | GO:0042989: sequestering of actin monomers | 3.33E-04 |
| 14 | GO:0015994: chlorophyll metabolic process | 4.45E-04 |
| 15 | GO:0006734: NADH metabolic process | 4.45E-04 |
| 16 | GO:0080110: sporopollenin biosynthetic process | 5.66E-04 |
| 17 | GO:0030041: actin filament polymerization | 5.66E-04 |
| 18 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 6.92E-04 |
| 19 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 6.92E-04 |
| 20 | GO:1901259: chloroplast rRNA processing | 8.25E-04 |
| 21 | GO:0010189: vitamin E biosynthetic process | 8.25E-04 |
| 22 | GO:0051510: regulation of unidimensional cell growth | 9.62E-04 |
| 23 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 9.62E-04 |
| 24 | GO:0016559: peroxisome fission | 1.11E-03 |
| 25 | GO:0048564: photosystem I assembly | 1.11E-03 |
| 26 | GO:0005978: glycogen biosynthetic process | 1.11E-03 |
| 27 | GO:0030091: protein repair | 1.11E-03 |
| 28 | GO:0007186: G-protein coupled receptor signaling pathway | 1.26E-03 |
| 29 | GO:0010206: photosystem II repair | 1.41E-03 |
| 30 | GO:0034765: regulation of ion transmembrane transport | 1.41E-03 |
| 31 | GO:0000373: Group II intron splicing | 1.41E-03 |
| 32 | GO:0010205: photoinhibition | 1.58E-03 |
| 33 | GO:0005982: starch metabolic process | 1.58E-03 |
| 34 | GO:0005983: starch catabolic process | 2.11E-03 |
| 35 | GO:0006108: malate metabolic process | 2.30E-03 |
| 36 | GO:0010020: chloroplast fission | 2.49E-03 |
| 37 | GO:0009266: response to temperature stimulus | 2.49E-03 |
| 38 | GO:0090351: seedling development | 2.70E-03 |
| 39 | GO:0019762: glucosinolate catabolic process | 2.90E-03 |
| 40 | GO:0009416: response to light stimulus | 2.91E-03 |
| 41 | GO:0007010: cytoskeleton organization | 3.11E-03 |
| 42 | GO:0006874: cellular calcium ion homeostasis | 3.32E-03 |
| 43 | GO:0007017: microtubule-based process | 3.32E-03 |
| 44 | GO:0009695: jasmonic acid biosynthetic process | 3.32E-03 |
| 45 | GO:0009269: response to desiccation | 3.54E-03 |
| 46 | GO:0031408: oxylipin biosynthetic process | 3.54E-03 |
| 47 | GO:0016998: cell wall macromolecule catabolic process | 3.54E-03 |
| 48 | GO:0010584: pollen exine formation | 4.23E-03 |
| 49 | GO:0042391: regulation of membrane potential | 4.71E-03 |
| 50 | GO:0000413: protein peptidyl-prolyl isomerization | 4.71E-03 |
| 51 | GO:0009741: response to brassinosteroid | 4.96E-03 |
| 52 | GO:0009646: response to absence of light | 5.22E-03 |
| 53 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 5.74E-03 |
| 54 | GO:0032502: developmental process | 6.00E-03 |
| 55 | GO:0030163: protein catabolic process | 6.27E-03 |
| 56 | GO:0071805: potassium ion transmembrane transport | 6.83E-03 |
| 57 | GO:0006979: response to oxidative stress | 7.19E-03 |
| 58 | GO:0010027: thylakoid membrane organization | 7.40E-03 |
| 59 | GO:0015979: photosynthesis | 7.46E-03 |
| 60 | GO:0006508: proteolysis | 7.55E-03 |
| 61 | GO:0010411: xyloglucan metabolic process | 8.29E-03 |
| 62 | GO:0009651: response to salt stress | 8.63E-03 |
| 63 | GO:0006811: ion transport | 9.54E-03 |
| 64 | GO:0048527: lateral root development | 9.86E-03 |
| 65 | GO:0008152: metabolic process | 1.06E-02 |
| 66 | GO:0006099: tricarboxylic acid cycle | 1.09E-02 |
| 67 | GO:0006631: fatty acid metabolic process | 1.19E-02 |
| 68 | GO:0005975: carbohydrate metabolic process | 1.21E-02 |
| 69 | GO:0042546: cell wall biogenesis | 1.29E-02 |
| 70 | GO:0009644: response to high light intensity | 1.33E-02 |
| 71 | GO:0031347: regulation of defense response | 1.44E-02 |
| 72 | GO:0055114: oxidation-reduction process | 1.47E-02 |
| 73 | GO:0009809: lignin biosynthetic process | 1.55E-02 |
| 74 | GO:0006096: glycolytic process | 1.75E-02 |
| 75 | GO:0009611: response to wounding | 1.76E-02 |
| 76 | GO:0009626: plant-type hypersensitive response | 1.83E-02 |
| 77 | GO:0042545: cell wall modification | 1.95E-02 |
| 78 | GO:0009742: brassinosteroid mediated signaling pathway | 2.08E-02 |
| 79 | GO:0009845: seed germination | 2.47E-02 |
| 80 | GO:0042744: hydrogen peroxide catabolic process | 2.57E-02 |
| 81 | GO:0007623: circadian rhythm | 2.94E-02 |
| 82 | GO:0010150: leaf senescence | 2.94E-02 |
| 83 | GO:0045490: pectin catabolic process | 2.94E-02 |
| 84 | GO:0009451: RNA modification | 2.99E-02 |
| 85 | GO:0006470: protein dephosphorylation | 3.24E-02 |
| 86 | GO:0009617: response to bacterium | 3.34E-02 |
| 87 | GO:0042742: defense response to bacterium | 3.48E-02 |
| 88 | GO:0009658: chloroplast organization | 4.01E-02 |
| 89 | GO:0009409: response to cold | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 3 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 4 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 5 | GO:0009011: starch synthase activity | 3.22E-06 |
| 6 | GO:0050139: nicotinate-N-glucosyltransferase activity | 5.48E-05 |
| 7 | GO:0050308: sugar-phosphatase activity | 5.48E-05 |
| 8 | GO:0004321: fatty-acyl-CoA synthase activity | 5.48E-05 |
| 9 | GO:0019203: carbohydrate phosphatase activity | 5.48E-05 |
| 10 | GO:0008746: NAD(P)+ transhydrogenase activity | 5.48E-05 |
| 11 | GO:0033201: alpha-1,4-glucan synthase activity | 1.34E-04 |
| 12 | GO:0008805: carbon-monoxide oxygenase activity | 1.34E-04 |
| 13 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.34E-04 |
| 14 | GO:0015099: nickel cation transmembrane transporter activity | 1.34E-04 |
| 15 | GO:0004176: ATP-dependent peptidase activity | 1.74E-04 |
| 16 | GO:0043169: cation binding | 2.28E-04 |
| 17 | GO:0004373: glycogen (starch) synthase activity | 2.28E-04 |
| 18 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 4.45E-04 |
| 19 | GO:0080032: methyl jasmonate esterase activity | 4.45E-04 |
| 20 | GO:0004930: G-protein coupled receptor activity | 4.45E-04 |
| 21 | GO:0003785: actin monomer binding | 5.66E-04 |
| 22 | GO:2001070: starch binding | 6.92E-04 |
| 23 | GO:0080030: methyl indole-3-acetate esterase activity | 6.92E-04 |
| 24 | GO:0016615: malate dehydrogenase activity | 6.92E-04 |
| 25 | GO:0004222: metalloendopeptidase activity | 7.35E-04 |
| 26 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 8.25E-04 |
| 27 | GO:0030060: L-malate dehydrogenase activity | 8.25E-04 |
| 28 | GO:0005242: inward rectifier potassium channel activity | 8.25E-04 |
| 29 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.11E-03 |
| 30 | GO:0016207: 4-coumarate-CoA ligase activity | 1.41E-03 |
| 31 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.41E-03 |
| 32 | GO:0030234: enzyme regulator activity | 1.75E-03 |
| 33 | GO:0047372: acylglycerol lipase activity | 1.93E-03 |
| 34 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.11E-03 |
| 35 | GO:0008131: primary amine oxidase activity | 2.49E-03 |
| 36 | GO:0005217: intracellular ligand-gated ion channel activity | 2.70E-03 |
| 37 | GO:0004970: ionotropic glutamate receptor activity | 2.70E-03 |
| 38 | GO:0004857: enzyme inhibitor activity | 3.11E-03 |
| 39 | GO:0043424: protein histidine kinase binding | 3.32E-03 |
| 40 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.14E-03 |
| 41 | GO:0042802: identical protein binding | 4.34E-03 |
| 42 | GO:0030551: cyclic nucleotide binding | 4.71E-03 |
| 43 | GO:0005249: voltage-gated potassium channel activity | 4.71E-03 |
| 44 | GO:0016853: isomerase activity | 5.22E-03 |
| 45 | GO:0050662: coenzyme binding | 5.22E-03 |
| 46 | GO:0005525: GTP binding | 5.47E-03 |
| 47 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 5.74E-03 |
| 48 | GO:0008233: peptidase activity | 6.43E-03 |
| 49 | GO:0008237: metallopeptidase activity | 6.83E-03 |
| 50 | GO:0005200: structural constituent of cytoskeleton | 6.83E-03 |
| 51 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 8.29E-03 |
| 52 | GO:0008236: serine-type peptidase activity | 8.60E-03 |
| 53 | GO:0016757: transferase activity, transferring glycosyl groups | 8.81E-03 |
| 54 | GO:0003924: GTPase activity | 9.65E-03 |
| 55 | GO:0016491: oxidoreductase activity | 1.01E-02 |
| 56 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.40E-02 |
| 57 | GO:0045330: aspartyl esterase activity | 1.67E-02 |
| 58 | GO:0045735: nutrient reservoir activity | 1.75E-02 |
| 59 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.87E-02 |
| 60 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.87E-02 |
| 61 | GO:0030599: pectinesterase activity | 1.91E-02 |
| 62 | GO:0016874: ligase activity | 1.91E-02 |
| 63 | GO:0003779: actin binding | 1.95E-02 |
| 64 | GO:0019843: rRNA binding | 2.34E-02 |
| 65 | GO:0005507: copper ion binding | 2.45E-02 |
| 66 | GO:0008017: microtubule binding | 3.04E-02 |
| 67 | GO:0008194: UDP-glycosyltransferase activity | 3.19E-02 |
| 68 | GO:0003824: catalytic activity | 3.82E-02 |
| 69 | GO:0004601: peroxidase activity | 4.01E-02 |
| 70 | GO:0016788: hydrolase activity, acting on ester bonds | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.84E-11 |
| 3 | GO:0009570: chloroplast stroma | 2.76E-07 |
| 4 | GO:0009534: chloroplast thylakoid | 4.47E-07 |
| 5 | GO:0009579: thylakoid | 7.34E-06 |
| 6 | GO:0009501: amyloplast | 2.21E-05 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 2.19E-04 |
| 8 | GO:0009941: chloroplast envelope | 2.39E-04 |
| 9 | GO:0015630: microtubule cytoskeleton | 3.33E-04 |
| 10 | GO:0009526: plastid envelope | 4.45E-04 |
| 11 | GO:0055035: plastid thylakoid membrane | 5.66E-04 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 9.62E-04 |
| 13 | GO:0031977: thylakoid lumen | 9.88E-04 |
| 14 | GO:0009505: plant-type cell wall | 1.94E-03 |
| 15 | GO:0009706: chloroplast inner membrane | 2.00E-03 |
| 16 | GO:0005578: proteinaceous extracellular matrix | 2.30E-03 |
| 17 | GO:0005938: cell cortex | 2.30E-03 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 2.49E-03 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 3.32E-03 |
| 20 | GO:0015629: actin cytoskeleton | 4.00E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 5.48E-03 |
| 22 | GO:0030529: intracellular ribonucleoprotein complex | 7.40E-03 |
| 23 | GO:0009707: chloroplast outer membrane | 8.91E-03 |
| 24 | GO:0048046: apoplast | 9.75E-03 |
| 25 | GO:0005618: cell wall | 1.11E-02 |
| 26 | GO:0005777: peroxisome | 1.97E-02 |
| 27 | GO:0010287: plastoglobule | 2.25E-02 |
| 28 | GO:0005802: trans-Golgi network | 2.76E-02 |
| 29 | GO:0005768: endosome | 3.13E-02 |
| 30 | GO:0046658: anchored component of plasma membrane | 3.59E-02 |
| 31 | GO:0009536: plastid | 4.26E-02 |
| 32 | GO:0005874: microtubule | 4.56E-02 |
| 33 | GO:0016021: integral component of membrane | 4.81E-02 |