GO Enrichment Analysis of Co-expressed Genes with
AT4G02550
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 2 | GO:0002143: tRNA wobble position uridine thiolation | 3.64E-05 |
| 3 | GO:0098721: uracil import across plasma membrane | 3.64E-05 |
| 4 | GO:0098702: adenine import across plasma membrane | 3.64E-05 |
| 5 | GO:0098710: guanine import across plasma membrane | 3.64E-05 |
| 6 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 3.64E-05 |
| 7 | GO:0035344: hypoxanthine transport | 3.64E-05 |
| 8 | GO:0055046: microgametogenesis | 4.65E-05 |
| 9 | GO:0019483: beta-alanine biosynthetic process | 9.09E-05 |
| 10 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 9.09E-05 |
| 11 | GO:0006212: uracil catabolic process | 9.09E-05 |
| 12 | GO:0042780: tRNA 3'-end processing | 1.58E-04 |
| 13 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 1.58E-04 |
| 14 | GO:0010498: proteasomal protein catabolic process | 1.58E-04 |
| 15 | GO:0048194: Golgi vesicle budding | 2.33E-04 |
| 16 | GO:0010104: regulation of ethylene-activated signaling pathway | 2.33E-04 |
| 17 | GO:0002679: respiratory burst involved in defense response | 2.33E-04 |
| 18 | GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly | 3.14E-04 |
| 19 | GO:0033320: UDP-D-xylose biosynthetic process | 3.14E-04 |
| 20 | GO:0048015: phosphatidylinositol-mediated signaling | 4.01E-04 |
| 21 | GO:0006090: pyruvate metabolic process | 4.01E-04 |
| 22 | GO:0005513: detection of calcium ion | 4.01E-04 |
| 23 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 4.01E-04 |
| 24 | GO:0006777: Mo-molybdopterin cofactor biosynthetic process | 4.92E-04 |
| 25 | GO:0042732: D-xylose metabolic process | 4.92E-04 |
| 26 | GO:0043966: histone H3 acetylation | 5.88E-04 |
| 27 | GO:0009612: response to mechanical stimulus | 5.88E-04 |
| 28 | GO:0043562: cellular response to nitrogen levels | 8.97E-04 |
| 29 | GO:0006303: double-strand break repair via nonhomologous end joining | 8.97E-04 |
| 30 | GO:0051865: protein autoubiquitination | 1.01E-03 |
| 31 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.01E-03 |
| 32 | GO:0000723: telomere maintenance | 1.12E-03 |
| 33 | GO:0009086: methionine biosynthetic process | 1.12E-03 |
| 34 | GO:0010629: negative regulation of gene expression | 1.24E-03 |
| 35 | GO:0072593: reactive oxygen species metabolic process | 1.36E-03 |
| 36 | GO:0006352: DNA-templated transcription, initiation | 1.36E-03 |
| 37 | GO:0006108: malate metabolic process | 1.62E-03 |
| 38 | GO:0006807: nitrogen compound metabolic process | 1.62E-03 |
| 39 | GO:0046854: phosphatidylinositol phosphorylation | 1.89E-03 |
| 40 | GO:0009225: nucleotide-sugar metabolic process | 1.89E-03 |
| 41 | GO:0080188: RNA-directed DNA methylation | 1.89E-03 |
| 42 | GO:0051260: protein homooligomerization | 2.48E-03 |
| 43 | GO:0009561: megagametogenesis | 2.96E-03 |
| 44 | GO:0006310: DNA recombination | 4.56E-03 |
| 45 | GO:0019760: glucosinolate metabolic process | 4.56E-03 |
| 46 | GO:0001666: response to hypoxia | 5.15E-03 |
| 47 | GO:0006950: response to stress | 5.76E-03 |
| 48 | GO:0009867: jasmonic acid mediated signaling pathway | 7.28E-03 |
| 49 | GO:0006099: tricarboxylic acid cycle | 7.51E-03 |
| 50 | GO:0006897: endocytosis | 8.21E-03 |
| 51 | GO:0000209: protein polyubiquitination | 8.93E-03 |
| 52 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 9.93E-03 |
| 53 | GO:0009736: cytokinin-activated signaling pathway | 1.07E-02 |
| 54 | GO:0016569: covalent chromatin modification | 1.32E-02 |
| 55 | GO:0042545: cell wall modification | 1.34E-02 |
| 56 | GO:0018105: peptidyl-serine phosphorylation | 1.40E-02 |
| 57 | GO:0051726: regulation of cell cycle | 1.43E-02 |
| 58 | GO:0006413: translational initiation | 1.92E-02 |
| 59 | GO:0045490: pectin catabolic process | 2.02E-02 |
| 60 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.19E-02 |
| 61 | GO:0006470: protein dephosphorylation | 2.23E-02 |
| 62 | GO:0009617: response to bacterium | 2.29E-02 |
| 63 | GO:0010200: response to chitin | 3.30E-02 |
| 64 | GO:0046777: protein autophosphorylation | 3.38E-02 |
| 65 | GO:0006355: regulation of transcription, DNA-templated | 3.80E-02 |
| 66 | GO:0032259: methylation | 4.12E-02 |
| 67 | GO:0006351: transcription, DNA-templated | 4.18E-02 |
| 68 | GO:0009408: response to heat | 4.25E-02 |
| 69 | GO:0006281: DNA repair | 4.25E-02 |
| 70 | GO:0007165: signal transduction | 4.26E-02 |
| 71 | GO:0006397: mRNA processing | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 2 | GO:0061604: molybdopterin-synthase sulfurtransferase activity | 0.00E+00 |
| 3 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 4 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 5 | GO:0061605: molybdopterin-synthase adenylyltransferase activity | 0.00E+00 |
| 6 | GO:0001102: RNA polymerase II activating transcription factor binding | 3.64E-05 |
| 7 | GO:0047150: betaine-homocysteine S-methyltransferase activity | 3.64E-05 |
| 8 | GO:0015207: adenine transmembrane transporter activity | 3.64E-05 |
| 9 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 3.64E-05 |
| 10 | GO:0016303: 1-phosphatidylinositol-3-kinase activity | 3.64E-05 |
| 11 | GO:0015208: guanine transmembrane transporter activity | 3.64E-05 |
| 12 | GO:0015294: solute:cation symporter activity | 3.64E-05 |
| 13 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.65E-05 |
| 14 | GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters | 9.09E-05 |
| 15 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 1.58E-04 |
| 16 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 1.58E-04 |
| 17 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 1.58E-04 |
| 18 | GO:0004792: thiosulfate sulfurtransferase activity | 2.33E-04 |
| 19 | GO:0070628: proteasome binding | 3.14E-04 |
| 20 | GO:0004470: malic enzyme activity | 3.14E-04 |
| 21 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 3.14E-04 |
| 22 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 3.14E-04 |
| 23 | GO:0015210: uracil transmembrane transporter activity | 3.14E-04 |
| 24 | GO:0008641: small protein activating enzyme activity | 4.01E-04 |
| 25 | GO:0008948: oxaloacetate decarboxylase activity | 4.01E-04 |
| 26 | GO:0048040: UDP-glucuronate decarboxylase activity | 4.92E-04 |
| 27 | GO:0070403: NAD+ binding | 5.88E-04 |
| 28 | GO:0004012: phospholipid-translocating ATPase activity | 5.88E-04 |
| 29 | GO:0008143: poly(A) binding | 6.87E-04 |
| 30 | GO:0042162: telomeric DNA binding | 6.87E-04 |
| 31 | GO:0004003: ATP-dependent DNA helicase activity | 1.01E-03 |
| 32 | GO:0017025: TBP-class protein binding | 1.89E-03 |
| 33 | GO:0051536: iron-sulfur cluster binding | 2.18E-03 |
| 34 | GO:0003954: NADH dehydrogenase activity | 2.18E-03 |
| 35 | GO:0005516: calmodulin binding | 2.49E-03 |
| 36 | GO:0000287: magnesium ion binding | 3.07E-03 |
| 37 | GO:0004402: histone acetyltransferase activity | 3.30E-03 |
| 38 | GO:0003684: damaged DNA binding | 4.56E-03 |
| 39 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 5.55E-03 |
| 40 | GO:0004683: calmodulin-dependent protein kinase activity | 5.76E-03 |
| 41 | GO:0005524: ATP binding | 5.94E-03 |
| 42 | GO:0003729: mRNA binding | 6.00E-03 |
| 43 | GO:0005096: GTPase activator activity | 6.39E-03 |
| 44 | GO:0005198: structural molecule activity | 9.42E-03 |
| 45 | GO:0051287: NAD binding | 9.93E-03 |
| 46 | GO:0003690: double-stranded DNA binding | 1.10E-02 |
| 47 | GO:0045330: aspartyl esterase activity | 1.15E-02 |
| 48 | GO:0030599: pectinesterase activity | 1.32E-02 |
| 49 | GO:0022857: transmembrane transporter activity | 1.32E-02 |
| 50 | GO:0016746: transferase activity, transferring acyl groups | 1.40E-02 |
| 51 | GO:0004386: helicase activity | 1.46E-02 |
| 52 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.64E-02 |
| 53 | GO:0046872: metal ion binding | 1.89E-02 |
| 54 | GO:0005509: calcium ion binding | 1.89E-02 |
| 55 | GO:0046910: pectinesterase inhibitor activity | 1.92E-02 |
| 56 | GO:0003824: catalytic activity | 2.25E-02 |
| 57 | GO:0003743: translation initiation factor activity | 2.26E-02 |
| 58 | GO:0008168: methyltransferase activity | 2.69E-02 |
| 59 | GO:0046982: protein heterodimerization activity | 2.72E-02 |
| 60 | GO:0004842: ubiquitin-protein transferase activity | 2.84E-02 |
| 61 | GO:0004497: monooxygenase activity | 3.22E-02 |
| 62 | GO:0061630: ubiquitin protein ligase activity | 3.34E-02 |
| 63 | GO:0004722: protein serine/threonine phosphatase activity | 3.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005942: phosphatidylinositol 3-kinase complex | 0.00E+00 |
| 2 | GO:0045252: oxoglutarate dehydrogenase complex | 3.64E-05 |
| 3 | GO:0043564: Ku70:Ku80 complex | 3.64E-05 |
| 4 | GO:0000124: SAGA complex | 9.09E-05 |
| 5 | GO:0031304: intrinsic component of mitochondrial inner membrane | 9.09E-05 |
| 6 | GO:0005669: transcription factor TFIID complex | 7.90E-04 |
| 7 | GO:0000784: nuclear chromosome, telomeric region | 8.97E-04 |
| 8 | GO:0010494: cytoplasmic stress granule | 1.01E-03 |
| 9 | GO:0048471: perinuclear region of cytoplasm | 1.36E-03 |
| 10 | GO:0005839: proteasome core complex | 2.48E-03 |
| 11 | GO:0071944: cell periphery | 4.37E-03 |
| 12 | GO:0005783: endoplasmic reticulum | 1.16E-02 |
| 13 | GO:0016020: membrane | 1.48E-02 |
| 14 | GO:0005774: vacuolar membrane | 1.75E-02 |
| 15 | GO:0005829: cytosol | 1.82E-02 |
| 16 | GO:0005886: plasma membrane | 2.59E-02 |
| 17 | GO:0009506: plasmodesma | 3.01E-02 |
| 18 | GO:0005794: Golgi apparatus | 4.66E-02 |