Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01950

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031508: pericentric heterochromatin assembly0.00E+00
2GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
3GO:0000271: polysaccharide biosynthetic process4.93E-06
4GO:0010411: xyloglucan metabolic process1.99E-05
5GO:0019354: siroheme biosynthetic process4.60E-05
6GO:0033481: galacturonate biosynthetic process4.60E-05
7GO:0090309: positive regulation of methylation-dependent chromatin silencing1.13E-04
8GO:0071497: cellular response to freezing1.13E-04
9GO:0010424: DNA methylation on cytosine within a CG sequence1.13E-04
10GO:0071555: cell wall organization1.58E-04
11GO:0006556: S-adenosylmethionine biosynthetic process1.95E-04
12GO:0032776: DNA methylation on cytosine1.95E-04
13GO:0045489: pectin biosynthetic process2.31E-04
14GO:0009741: response to brassinosteroid2.31E-04
15GO:0046345: abscisic acid catabolic process3.84E-04
16GO:2000762: regulation of phenylpropanoid metabolic process4.88E-04
17GO:0006555: methionine metabolic process5.98E-04
18GO:0060918: auxin transport5.98E-04
19GO:1900425: negative regulation of defense response to bacterium5.98E-04
20GO:0016051: carbohydrate biosynthetic process6.76E-04
21GO:0009554: megasporogenesis7.13E-04
22GO:0050829: defense response to Gram-negative bacterium8.33E-04
23GO:0051510: regulation of unidimensional cell growth8.33E-04
24GO:0042546: cell wall biogenesis8.94E-04
25GO:0051865: protein autoubiquitination1.22E-03
26GO:0009638: phototropism1.36E-03
27GO:0006779: porphyrin-containing compound biosynthetic process1.36E-03
28GO:0006325: chromatin organization1.51E-03
29GO:0043069: negative regulation of programmed cell death1.51E-03
30GO:0000038: very long-chain fatty acid metabolic process1.66E-03
31GO:0010216: maintenance of DNA methylation1.66E-03
32GO:0018107: peptidyl-threonine phosphorylation1.98E-03
33GO:0034605: cellular response to heat2.14E-03
34GO:0009225: nucleotide-sugar metabolic process2.31E-03
35GO:0009969: xyloglucan biosynthetic process2.31E-03
36GO:0005992: trehalose biosynthetic process2.67E-03
37GO:0019953: sexual reproduction2.85E-03
38GO:0010017: red or far-red light signaling pathway3.23E-03
39GO:0006730: one-carbon metabolic process3.23E-03
40GO:0019722: calcium-mediated signaling3.63E-03
41GO:0009826: unidimensional cell growth4.05E-03
42GO:0010268: brassinosteroid homeostasis4.25E-03
43GO:0009958: positive gravitropism4.25E-03
44GO:0009791: post-embryonic development4.68E-03
45GO:0016132: brassinosteroid biosynthetic process4.91E-03
46GO:0010583: response to cyclopentenone5.13E-03
47GO:0080167: response to karrikin5.21E-03
48GO:0016567: protein ubiquitination5.24E-03
49GO:1901657: glycosyl compound metabolic process5.37E-03
50GO:0016125: sterol metabolic process5.60E-03
51GO:0009639: response to red or far red light5.60E-03
52GO:0009828: plant-type cell wall loosening5.60E-03
53GO:0007267: cell-cell signaling5.84E-03
54GO:0009788: negative regulation of abscisic acid-activated signaling pathway6.57E-03
55GO:0048767: root hair elongation7.87E-03
56GO:0010218: response to far red light8.14E-03
57GO:0010114: response to red light1.07E-02
58GO:0009664: plant-type cell wall organization1.26E-02
59GO:0009809: lignin biosynthetic process1.32E-02
60GO:0006486: protein glycosylation1.32E-02
61GO:0009585: red, far-red light phototransduction1.32E-02
62GO:0016569: covalent chromatin modification1.63E-02
63GO:0018105: peptidyl-serine phosphorylation1.73E-02
64GO:0009742: brassinosteroid mediated signaling pathway1.77E-02
65GO:0006468: protein phosphorylation2.14E-02
66GO:0006633: fatty acid biosynthetic process2.34E-02
67GO:0007166: cell surface receptor signaling pathway2.75E-02
68GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.08E-02
69GO:0010200: response to chitin4.08E-02
70GO:0046777: protein autophosphorylation4.18E-02
71GO:0045454: cell redox homeostasis4.52E-02
RankGO TermAdjusted P value
1GO:0004851: uroporphyrin-III C-methyltransferase activity0.00E+00
2GO:0080132: fatty acid alpha-hydroxylase activity4.60E-05
3GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.50E-04
4GO:0016758: transferase activity, transferring hexosyl groups1.79E-04
5GO:0010428: methyl-CpNpG binding1.95E-04
6GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.95E-04
7GO:0010429: methyl-CpNpN binding1.95E-04
8GO:0004478: methionine adenosyltransferase activity1.95E-04
9GO:0033843: xyloglucan 6-xylosyltransferase activity2.85E-04
10GO:0016762: xyloglucan:xyloglucosyl transferase activity2.87E-04
11GO:0010385: double-stranded methylated DNA binding3.84E-04
12GO:0050378: UDP-glucuronate 4-epimerase activity3.84E-04
13GO:0016798: hydrolase activity, acting on glycosyl bonds4.87E-04
14GO:0035252: UDP-xylosyltransferase activity5.98E-04
15GO:0004805: trehalose-phosphatase activity1.51E-03
16GO:0008327: methyl-CpG binding1.66E-03
17GO:0008134: transcription factor binding2.67E-03
18GO:0016759: cellulose synthase activity5.60E-03
19GO:0016722: oxidoreductase activity, oxidizing metal ions5.84E-03
20GO:0016757: transferase activity, transferring glycosyl groups6.20E-03
21GO:0102483: scopolin beta-glucosidase activity7.08E-03
22GO:0004842: ubiquitin-protein transferase activity8.02E-03
23GO:0004672: protein kinase activity8.66E-03
24GO:0008422: beta-glucosidase activity9.53E-03
25GO:0042393: histone binding9.82E-03
26GO:0016298: lipase activity1.35E-02
27GO:0015035: protein disulfide oxidoreductase activity1.73E-02
28GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.81E-02
29GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.38E-02
30GO:0008017: microtubule binding2.59E-02
31GO:0005506: iron ion binding2.73E-02
32GO:0003824: catalytic activity3.04E-02
33GO:0008168: methyltransferase activity3.32E-02
34GO:0003682: chromatin binding3.55E-02
35GO:0004674: protein serine/threonine kinase activity3.97E-02
36GO:0061630: ubiquitin protein ligase activity4.13E-02
37GO:0004871: signal transducer activity4.68E-02
RankGO TermAdjusted P value
1GO:0031225: anchored component of membrane8.02E-06
2GO:0009505: plant-type cell wall2.46E-04
3GO:0009506: plasmodesma4.10E-04
4GO:0010369: chromocenter7.13E-04
5GO:0005576: extracellular region7.95E-04
6GO:0005794: Golgi apparatus8.60E-04
7GO:0005720: nuclear heterochromatin1.22E-03
8GO:0000139: Golgi membrane1.53E-03
9GO:0048046: apoplast1.64E-03
10GO:0005618: cell wall1.91E-03
11GO:0005615: extracellular space3.06E-03
12GO:0005886: plasma membrane3.20E-03
13GO:0046658: anchored component of plasma membrane3.61E-03
14GO:0005802: trans-Golgi network3.95E-03
15GO:0032580: Golgi cisterna membrane5.60E-03
16GO:0016021: integral component of membrane1.09E-02
17GO:0005768: endosome2.50E-02
<
Gene type



Gene DE type