Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01690

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0018160: peptidyl-pyrromethane cofactor linkage0.00E+00
2GO:0015995: chlorophyll biosynthetic process3.86E-09
3GO:0006783: heme biosynthetic process4.79E-09
4GO:0006782: protoporphyrinogen IX biosynthetic process9.06E-09
5GO:0009765: photosynthesis, light harvesting9.96E-05
6GO:0009769: photosynthesis, light harvesting in photosystem II2.34E-04
7GO:0009645: response to low light intensity stimulus2.34E-04
8GO:0006779: porphyrin-containing compound biosynthetic process3.93E-04
9GO:0040008: regulation of growth4.03E-04
10GO:0006949: syncytium formation4.35E-04
11GO:0019684: photosynthesis, light reaction4.78E-04
12GO:0009768: photosynthesis, light harvesting in photosystem I8.07E-04
13GO:0009269: response to desiccation8.59E-04
14GO:0015979: photosynthesis8.95E-04
15GO:0009831: plant-type cell wall modification involved in multidimensional cell growth9.61E-04
16GO:0007275: multicellular organism development1.05E-03
17GO:0009741: response to brassinosteroid1.18E-03
18GO:0010193: response to ozone1.35E-03
19GO:0010583: response to cyclopentenone1.41E-03
20GO:0009828: plant-type cell wall loosening1.53E-03
21GO:0009734: auxin-activated signaling pathway1.58E-03
22GO:0009735: response to cytokinin1.82E-03
23GO:0018298: protein-chromophore linkage2.05E-03
24GO:0010218: response to far red light2.19E-03
25GO:0009637: response to blue light2.40E-03
26GO:0010114: response to red light2.85E-03
27GO:0009644: response to high light intensity3.01E-03
28GO:0009664: plant-type cell wall organization3.32E-03
29GO:0010224: response to UV-B3.57E-03
30GO:0042742: defense response to bacterium3.96E-03
31GO:0009624: response to nematode4.43E-03
32GO:0009733: response to auxin4.45E-03
33GO:0045490: pectin catabolic process6.45E-03
34GO:0009826: unidimensional cell growth8.51E-03
35GO:0045892: negative regulation of transcription, DNA-templated1.17E-02
36GO:0016042: lipid catabolic process1.31E-02
37GO:0009416: response to light stimulus2.01E-02
38GO:0009611: response to wounding2.04E-02
39GO:0071555: cell wall organization3.33E-02
40GO:0009409: response to cold4.13E-02
41GO:0005975: carbohydrate metabolic process4.48E-02
42GO:0046686: response to cadmium ion4.57E-02
RankGO TermAdjusted P value
1GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
2GO:0004418: hydroxymethylbilane synthase activity0.00E+00
3GO:0016832: aldehyde-lyase activity1.98E-04
4GO:0016829: lyase activity3.32E-04
5GO:0008266: poly(U) RNA binding6.14E-04
6GO:0031409: pigment binding7.09E-04
7GO:0030570: pectate lyase activity9.61E-04
8GO:0016168: chlorophyll binding1.78E-03
9GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.26E-03
10GO:0004650: polygalacturonase activity4.17E-03
11GO:0016788: hydrolase activity, acting on ester bonds8.86E-03
12GO:0050660: flavin adenine dinucleotide binding9.69E-03
13GO:0052689: carboxylic ester hydrolase activity1.09E-02
14GO:0005509: calcium ion binding3.14E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009535: chloroplast thylakoid membrane3.15E-10
3GO:0009534: chloroplast thylakoid3.40E-07
4GO:0009507: chloroplast4.28E-07
5GO:0030095: chloroplast photosystem II7.22E-06
6GO:0009543: chloroplast thylakoid lumen8.93E-06
7GO:0042646: plastid nucleoid7.16E-05
8GO:0009517: PSII associated light-harvesting complex II9.96E-05
9GO:0009570: chloroplast stroma1.16E-04
10GO:0016363: nuclear matrix1.98E-04
11GO:0009579: thylakoid2.28E-04
12GO:0009538: photosystem I reaction center2.72E-04
13GO:0010287: plastoglobule2.91E-04
14GO:0009941: chloroplast envelope4.94E-04
15GO:0030076: light-harvesting complex6.61E-04
16GO:0009654: photosystem II oxygen evolving complex8.07E-04
17GO:0009522: photosystem I1.23E-03
18GO:0009523: photosystem II1.29E-03
19GO:0019898: extrinsic component of membrane1.29E-03
20GO:0031977: thylakoid lumen2.70E-03
21GO:0031969: chloroplast membrane1.02E-02
22GO:0048046: apoplast1.44E-02
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Gene type



Gene DE type