Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01250

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006792: regulation of sulfur utilization0.00E+00
2GO:0080164: regulation of nitric oxide metabolic process5.43E-06
3GO:0010200: response to chitin1.48E-05
4GO:0071497: cellular response to freezing1.49E-05
5GO:0051592: response to calcium ion1.49E-05
6GO:0009751: response to salicylic acid2.57E-05
7GO:0042542: response to hydrogen peroxide5.40E-05
8GO:0046345: abscisic acid catabolic process5.99E-05
9GO:0010438: cellular response to sulfur starvation7.90E-05
10GO:0009612: response to mechanical stimulus1.22E-04
11GO:0010038: response to metal ion1.46E-04
12GO:0030162: regulation of proteolysis1.70E-04
13GO:0010439: regulation of glucosinolate biosynthetic process1.70E-04
14GO:0048574: long-day photoperiodism, flowering1.96E-04
15GO:1903507: negative regulation of nucleic acid-templated transcription3.06E-04
16GO:0009723: response to ethylene3.80E-04
17GO:0034605: cellular response to heat3.96E-04
18GO:2000022: regulation of jasmonic acid mediated signaling pathway5.89E-04
19GO:0040007: growth6.23E-04
20GO:0009753: response to jasmonic acid6.33E-04
21GO:0000271: polysaccharide biosynthetic process7.29E-04
22GO:0009741: response to brassinosteroid7.65E-04
23GO:0010268: brassinosteroid homeostasis7.65E-04
24GO:0045489: pectin biosynthetic process7.65E-04
25GO:0009646: response to absence of light8.01E-04
26GO:0016132: brassinosteroid biosynthetic process8.75E-04
27GO:0016125: sterol metabolic process9.89E-04
28GO:0009639: response to red or far red light9.89E-04
29GO:0001666: response to hypoxia1.11E-03
30GO:0048527: lateral root development1.44E-03
31GO:0045087: innate immune response1.53E-03
32GO:0016051: carbohydrate biosynthetic process1.53E-03
33GO:0031347: regulation of defense response2.06E-03
34GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.06E-03
35GO:0009733: response to auxin2.25E-03
36GO:0009909: regulation of flower development2.37E-03
37GO:0009409: response to cold2.71E-03
38GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.39E-03
39GO:0009739: response to gibberellin4.39E-03
40GO:0016567: protein ubiquitination6.03E-03
41GO:0045454: cell redox homeostasis7.20E-03
42GO:0009408: response to heat8.33E-03
43GO:0009873: ethylene-activated signaling pathway9.96E-03
44GO:0006357: regulation of transcription from RNA polymerase II promoter1.01E-02
45GO:0009611: response to wounding1.27E-02
46GO:0006355: regulation of transcription, DNA-templated1.30E-02
47GO:0045893: positive regulation of transcription, DNA-templated1.38E-02
48GO:0009414: response to water deprivation2.02E-02
49GO:0071555: cell wall organization2.06E-02
50GO:0030154: cell differentiation2.19E-02
51GO:0007275: multicellular organism development3.34E-02
52GO:0009737: response to abscisic acid3.54E-02
RankGO TermAdjusted P value
1GO:0010295: (+)-abscisic acid 8'-hydroxylase activity2.75E-05
2GO:0003712: transcription cofactor activity4.26E-04
3GO:0003714: transcription corepressor activity4.90E-04
4GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity5.89E-04
5GO:0004402: histone acetyltransferase activity7.29E-04
6GO:0044212: transcription regulatory region DNA binding2.01E-03
7GO:0031625: ubiquitin protein ligase binding2.37E-03
8GO:0016758: transferase activity, transferring hexosyl groups3.21E-03
9GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting7.20E-03
10GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding7.76E-03
11GO:0043565: sequence-specific DNA binding1.01E-02
12GO:0008270: zinc ion binding1.08E-02
13GO:0019825: oxygen binding1.60E-02
14GO:0005516: calmodulin binding1.67E-02
15GO:0005509: calcium ion binding1.94E-02
16GO:0005506: iron ion binding2.04E-02
17GO:0046983: protein dimerization activity2.53E-02
18GO:0004842: ubiquitin-protein transferase activity2.59E-02
19GO:0020037: heme binding2.85E-02
20GO:0003700: transcription factor activity, sequence-specific DNA binding2.85E-02
21GO:0016757: transferase activity, transferring glycosyl groups4.93E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0005615: extracellular space2.37E-04
3GO:0015629: actin cytoskeleton6.23E-04
4GO:0005794: Golgi apparatus1.23E-03
5GO:0019005: SCF ubiquitin ligase complex1.31E-03
6GO:0009505: plant-type cell wall2.51E-03
7GO:0048046: apoplast7.21E-03
8GO:0000139: Golgi membrane2.56E-02
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Gene type



Gene DE type





AT5G11070