Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G63200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010430: fatty acid omega-oxidation0.00E+00
2GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
3GO:0006633: fatty acid biosynthetic process1.14E-05
4GO:0006631: fatty acid metabolic process3.73E-05
5GO:0006436: tryptophanyl-tRNA aminoacylation4.18E-05
6GO:0045793: positive regulation of cell size1.78E-04
7GO:0006065: UDP-glucuronate biosynthetic process1.78E-04
8GO:0043481: anthocyanin accumulation in tissues in response to UV light2.63E-04
9GO:0007267: cell-cell signaling3.27E-04
10GO:0015689: molybdate ion transport3.53E-04
11GO:0006085: acetyl-CoA biosynthetic process3.53E-04
12GO:0006086: acetyl-CoA biosynthetic process from pyruvate5.51E-04
13GO:0009635: response to herbicide5.51E-04
14GO:0010405: arabinogalactan protein metabolic process5.51E-04
15GO:0018258: protein O-linked glycosylation via hydroxyproline5.51E-04
16GO:0042372: phylloquinone biosynthetic process6.58E-04
17GO:0045995: regulation of embryonic development7.69E-04
18GO:0007155: cell adhesion8.84E-04
19GO:0006857: oligopeptide transport1.08E-03
20GO:0006754: ATP biosynthetic process1.13E-03
21GO:0043069: negative regulation of programmed cell death1.39E-03
22GO:0015706: nitrate transport1.67E-03
23GO:0050826: response to freezing1.82E-03
24GO:0010167: response to nitrate2.13E-03
25GO:0010025: wax biosynthetic process2.29E-03
26GO:0045490: pectin catabolic process2.42E-03
27GO:0007010: cytoskeleton organization2.46E-03
28GO:0006418: tRNA aminoacylation for protein translation2.62E-03
29GO:0030245: cellulose catabolic process2.97E-03
30GO:0009294: DNA mediated transformation3.15E-03
31GO:0019722: calcium-mediated signaling3.33E-03
32GO:0016117: carotenoid biosynthetic process3.52E-03
33GO:0048868: pollen tube development3.91E-03
34GO:0019252: starch biosynthetic process4.31E-03
35GO:0071554: cell wall organization or biogenesis4.51E-03
36GO:0071555: cell wall organization4.54E-03
37GO:0010583: response to cyclopentenone4.72E-03
38GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.76E-03
39GO:1901657: glycosyl compound metabolic process4.93E-03
40GO:0016126: sterol biosynthetic process5.81E-03
41GO:0009911: positive regulation of flower development5.81E-03
42GO:0042128: nitrate assimilation6.27E-03
43GO:0010411: xyloglucan metabolic process6.50E-03
44GO:0015995: chlorophyll biosynthetic process6.50E-03
45GO:0055114: oxidation-reduction process6.72E-03
46GO:0016311: dephosphorylation6.74E-03
47GO:0048481: plant ovule development6.98E-03
48GO:0009817: defense response to fungus, incompatible interaction6.98E-03
49GO:0000160: phosphorelay signal transduction system7.22E-03
50GO:0009813: flavonoid biosynthetic process7.22E-03
51GO:0007568: aging7.72E-03
52GO:0006839: mitochondrial transport9.01E-03
53GO:0051707: response to other organism9.82E-03
54GO:0042546: cell wall biogenesis1.01E-02
55GO:0042538: hyperosmotic salinity response1.15E-02
56GO:0009736: cytokinin-activated signaling pathway1.21E-02
57GO:0051603: proteolysis involved in cellular protein catabolic process1.24E-02
58GO:0006096: glycolytic process1.36E-02
59GO:0048367: shoot system development1.39E-02
60GO:0009553: embryo sac development1.52E-02
61GO:0009742: brassinosteroid mediated signaling pathway1.62E-02
62GO:0009414: response to water deprivation2.39E-02
63GO:0009617: response to bacterium2.60E-02
64GO:0048366: leaf development3.52E-02
65GO:0005975: carbohydrate metabolic process3.71E-02
66GO:0006629: lipid metabolic process4.81E-02
67GO:0048364: root development4.96E-02
RankGO TermAdjusted P value
1GO:0050613: delta14-sterol reductase activity0.00E+00
2GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
3GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
4GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
5GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
6GO:0004830: tryptophan-tRNA ligase activity4.18E-05
7GO:0047259: glucomannan 4-beta-mannosyltransferase activity4.18E-05
8GO:0080132: fatty acid alpha-hydroxylase activity4.18E-05
9GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity1.04E-04
10GO:0004802: transketolase activity1.04E-04
11GO:0046593: mandelonitrile lyase activity1.04E-04
12GO:0030570: pectate lyase activity1.45E-04
13GO:0005504: fatty acid binding1.78E-04
14GO:0003979: UDP-glucose 6-dehydrogenase activity1.78E-04
15GO:0070330: aromatase activity1.78E-04
16GO:0003878: ATP citrate synthase activity2.63E-04
17GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.63E-04
18GO:0045430: chalcone isomerase activity3.53E-04
19GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity3.53E-04
20GO:0015098: molybdate ion transmembrane transporter activity3.53E-04
21GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.23E-04
22GO:0018685: alkane 1-monooxygenase activity4.50E-04
23GO:0016208: AMP binding5.51E-04
24GO:1990714: hydroxyproline O-galactosyltransferase activity5.51E-04
25GO:0051753: mannan synthase activity6.58E-04
26GO:0016832: aldehyde-lyase activity6.58E-04
27GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism1.13E-03
28GO:0015112: nitrate transmembrane transporter activity1.25E-03
29GO:0016829: lyase activity1.91E-03
30GO:0051087: chaperone binding2.62E-03
31GO:0008810: cellulase activity3.15E-03
32GO:0004812: aminoacyl-tRNA ligase activity3.52E-03
33GO:0016762: xyloglucan:xyloglucosyl transferase activity4.51E-03
34GO:0000156: phosphorelay response regulator activity4.93E-03
35GO:0016413: O-acetyltransferase activity5.59E-03
36GO:0016798: hydrolase activity, acting on glycosyl bonds6.50E-03
37GO:0102483: scopolin beta-glucosidase activity6.50E-03
38GO:0030145: manganese ion binding7.72E-03
39GO:0016614: oxidoreductase activity, acting on CH-OH group of donors7.72E-03
40GO:0003993: acid phosphatase activity8.48E-03
41GO:0008422: beta-glucosidase activity8.75E-03
42GO:0004185: serine-type carboxypeptidase activity9.82E-03
43GO:0015293: symporter activity1.07E-02
44GO:0051287: NAD binding1.12E-02
45GO:0045735: nutrient reservoir activity1.36E-02
46GO:0004650: polygalacturonase activity1.46E-02
47GO:0016758: transferase activity, transferring hexosyl groups1.79E-02
48GO:0008017: microtubule binding2.37E-02
49GO:0005506: iron ion binding2.41E-02
50GO:0005215: transporter activity2.71E-02
51GO:0042802: identical protein binding2.72E-02
52GO:0016491: oxidoreductase activity3.23E-02
53GO:0050660: flavin adenine dinucleotide binding3.47E-02
54GO:0004871: signal transducer activity4.29E-02
55GO:0004722: protein serine/threonine phosphatase activity4.43E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0048046: apoplast5.17E-06
3GO:0031225: anchored component of membrane5.56E-06
4GO:0005576: extracellular region1.23E-05
5GO:0009346: citrate lyase complex2.63E-04
6GO:0046658: anchored component of plasma membrane3.52E-04
7GO:0005618: cell wall1.52E-03
8GO:0030176: integral component of endoplasmic reticulum membrane2.13E-03
9GO:0005778: peroxisomal membrane5.36E-03
10GO:0016021: integral component of membrane6.55E-03
11GO:0009941: chloroplast envelope8.37E-03
12GO:0005856: cytoskeleton1.07E-02
13GO:0009579: thylakoid1.44E-02
14GO:0005615: extracellular space2.48E-02
15GO:0009505: plant-type cell wall3.07E-02
16GO:0000139: Golgi membrane3.32E-02
17GO:0005874: microtubule3.56E-02
18GO:0031969: chloroplast membrane3.65E-02
19GO:0005886: plasma membrane4.29E-02
20GO:0005743: mitochondrial inner membrane4.57E-02
21GO:0009570: chloroplast stroma4.83E-02
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Gene type



Gene DE type