co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G63120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
2	GO:0090393: sepal giant cell development	0.00E+00
3	GO:0006659: phosphatidylserine biosynthetic process	6.91E-05
4	GO:0006094: gluconeogenesis	1.19E-04
5	GO:0019253: reductive pentose-phosphate cycle	1.36E-04
6	GO:0007154: cell communication	1.66E-04
7	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.66E-04
8	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.66E-04
9	GO:0080092: regulation of pollen tube growth	2.61E-04
10	GO:0006696: ergosterol biosynthetic process	2.81E-04
11	GO:0006000: fructose metabolic process	2.81E-04
12	GO:0016117: carotenoid biosynthetic process	3.38E-04
13	GO:0045489: pectin biosynthetic process	3.94E-04
14	GO:0032877: positive regulation of DNA endoreduplication	4.06E-04
15	GO:0051016: barbed-end actin filament capping	4.06E-04
16	GO:0071555: cell wall organization	4.42E-04
17	GO:0010583: response to cyclopentenone	5.17E-04
18	GO:0031122: cytoplasmic microtubule organization	5.42E-04
19	GO:0006021: inositol biosynthetic process	5.42E-04
20	GO:0010090: trichome morphogenesis	5.49E-04
21	GO:0046785: microtubule polymerization	6.87E-04
22	GO:0016120: carotene biosynthetic process	6.87E-04
23	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	8.40E-04
24	GO:0045926: negative regulation of growth	9.99E-04
25	GO:0016051: carbohydrate biosynthetic process	1.12E-03
26	GO:0045010: actin nucleation	1.34E-03
27	GO:0052543: callose deposition in cell wall	1.34E-03
28	GO:0007155: cell adhesion	1.34E-03
29	GO:0008610: lipid biosynthetic process	1.34E-03
30	GO:0009744: response to sucrose	1.42E-03
31	GO:0006002: fructose 6-phosphate metabolic process	1.53E-03
32	GO:0006754: ATP biosynthetic process	1.73E-03
33	GO:0009056: catabolic process	1.73E-03
34	GO:0006098: pentose-phosphate shunt	1.73E-03
35	GO:0010192: mucilage biosynthetic process	2.14E-03
36	GO:0019538: protein metabolic process	2.14E-03
37	GO:0006096: glycolytic process	2.24E-03
38	GO:0006006: glucose metabolic process	2.82E-03
39	GO:0030036: actin cytoskeleton organization	2.82E-03
40	GO:0009725: response to hormone	2.82E-03
41	GO:0005986: sucrose biosynthetic process	2.82E-03
42	GO:0009742: brassinosteroid mediated signaling pathway	2.85E-03
43	GO:0009969: xyloglucan biosynthetic process	3.30E-03
44	GO:0042343: indole glucosinolate metabolic process	3.30E-03
45	GO:0009833: plant-type primary cell wall biogenesis	3.56E-03
46	GO:0006833: water transport	3.56E-03
47	GO:0006633: fatty acid biosynthetic process	4.21E-03
48	GO:0009416: response to light stimulus	4.28E-03
49	GO:0098542: defense response to other organism	4.35E-03
50	GO:0006730: one-carbon metabolic process	4.63E-03
51	GO:0009294: DNA mediated transformation	4.91E-03
52	GO:0019722: calcium-mediated signaling	5.20E-03
53	GO:0000271: polysaccharide biosynthetic process	5.80E-03
54	GO:0034220: ion transmembrane transport	5.80E-03
55	GO:0009741: response to brassinosteroid	6.11E-03
56	GO:0007059: chromosome segregation	6.42E-03
57	GO:0019252: starch biosynthetic process	6.74E-03
58	GO:0008654: phospholipid biosynthetic process	6.74E-03
59	GO:0009791: post-embryonic development	6.74E-03
60	GO:0007264: small GTPase mediated signal transduction	7.40E-03
61	GO:0007267: cell-cell signaling	8.42E-03
62	GO:0051607: defense response to virus	8.77E-03
63	GO:0016126: sterol biosynthetic process	9.13E-03
64	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.15E-03
65	GO:0046777: protein autophosphorylation	9.46E-03
66	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	9.50E-03
67	GO:0045454: cell redox homeostasis	1.06E-02
68	GO:0048481: plant ovule development	1.10E-02
69	GO:0030244: cellulose biosynthetic process	1.10E-02
70	GO:0055114: oxidation-reduction process	1.13E-02
71	GO:0009832: plant-type cell wall biogenesis	1.14E-02
72	GO:0006631: fatty acid metabolic process	1.47E-02
73	GO:0042546: cell wall biogenesis	1.60E-02
74	GO:0005975: carbohydrate metabolic process	1.78E-02
75	GO:0046686: response to cadmium ion	1.84E-02
76	GO:0048316: seed development	2.22E-02
77	GO:0042545: cell wall modification	2.42E-02
78	GO:0040008: regulation of growth	3.53E-02
79	GO:0007623: circadian rhythm	3.65E-02
80	GO:0045490: pectin catabolic process	3.65E-02
81	GO:0009617: response to bacterium	4.14E-02
82	GO:0006468: protein phosphorylation	4.68E-02
83	GO:0042742: defense response to bacterium	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0050613: delta14-sterol reductase activity	0.00E+00
2	GO:0008962: phosphatidylglycerophosphatase activity	0.00E+00
3	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
4	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
5	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
6	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
7	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
8	GO:0046905: phytoene synthase activity	0.00E+00
9	GO:0008568: microtubule-severing ATPase activity	6.91E-05
10	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	6.91E-05
11	GO:0051996: squalene synthase activity	6.91E-05
12	GO:0005089: Rho guanyl-nucleotide exchange factor activity	8.80E-05
13	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	1.66E-04
14	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.66E-04
15	GO:0004512: inositol-3-phosphate synthase activity	1.66E-04
16	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.66E-04
17	GO:0048531: beta-1,3-galactosyltransferase activity	1.66E-04
18	GO:0070330: aromatase activity	2.81E-04
19	GO:0004148: dihydrolipoyl dehydrogenase activity	2.81E-04
20	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	4.06E-04
21	GO:0001872: (1->3)-beta-D-glucan binding	4.06E-04
22	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.06E-04
23	GO:0018685: alkane 1-monooxygenase activity	6.87E-04
24	GO:0030247: polysaccharide binding	8.10E-04
25	GO:0000210: NAD+ diphosphatase activity	8.40E-04
26	GO:0080030: methyl indole-3-acetate esterase activity	8.40E-04
27	GO:0004332: fructose-bisphosphate aldolase activity	8.40E-04
28	GO:0042578: phosphoric ester hydrolase activity	8.40E-04
29	GO:0016757: transferase activity, transferring glycosyl groups	9.77E-04
30	GO:0051753: mannan synthase activity	9.99E-04
31	GO:0004033: aldo-keto reductase (NADP) activity	1.34E-03
32	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.73E-03
33	GO:0004860: protein kinase inhibitor activity	2.36E-03
34	GO:0008378: galactosyltransferase activity	2.58E-03
35	GO:0004089: carbonate dehydratase activity	2.82E-03
36	GO:0004565: beta-galactosidase activity	2.82E-03
37	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.06E-03
38	GO:0016758: transferase activity, transferring hexosyl groups	3.27E-03
39	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.56E-03
40	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.56E-03
41	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.56E-03
42	GO:0004857: enzyme inhibitor activity	3.81E-03
43	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.63E-03
44	GO:0016760: cellulose synthase (UDP-forming) activity	4.91E-03
45	GO:0004872: receptor activity	6.74E-03
46	GO:0004674: protein serine/threonine kinase activity	7.19E-03
47	GO:0016788: hydrolase activity, acting on ester bonds	7.27E-03
48	GO:0051015: actin filament binding	7.73E-03
49	GO:0016759: cellulose synthase activity	8.08E-03
50	GO:0015250: water channel activity	9.13E-03
51	GO:0052689: carboxylic ester hydrolase activity	9.78E-03
52	GO:0003824: catalytic activity	1.18E-02
53	GO:0050897: cobalt ion binding	1.22E-02
54	GO:0050661: NADP binding	1.43E-02
55	GO:0051287: NAD binding	1.78E-02
56	GO:0016887: ATPase activity	2.03E-02
57	GO:0045330: aspartyl esterase activity	2.07E-02
58	GO:0030599: pectinesterase activity	2.37E-02
59	GO:0003779: actin binding	2.42E-02
60	GO:0015035: protein disulfide oxidoreductase activity	2.52E-02
61	GO:0016746: transferase activity, transferring acyl groups	2.52E-02
62	GO:0016787: hydrolase activity	2.74E-02
63	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.07E-02
64	GO:0004252: serine-type endopeptidase activity	3.12E-02
65	GO:0005507: copper ion binding	3.31E-02
66	GO:0019825: oxygen binding	3.31E-02
67	GO:0008017: microtubule binding	3.77E-02
68	GO:0008194: UDP-glycosyltransferase activity	3.95E-02
69	GO:0005506: iron ion binding	4.62E-02
70	GO:0005515: protein binding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0009505: plant-type cell wall	9.03E-08
2	GO:0009509: chromoplast	2.81E-04
3	GO:0005794: Golgi apparatus	3.57E-04
4	GO:0046658: anchored component of plasma membrane	8.07E-04
5	GO:0016021: integral component of membrane	9.08E-04
6	GO:0048046: apoplast	1.11E-03
7	GO:0009506: plasmodesma	1.56E-03
8	GO:0009941: chloroplast envelope	1.84E-03
9	GO:0055028: cortical microtubule	2.14E-03
10	GO:0016324: apical plasma membrane	2.14E-03
11	GO:0005765: lysosomal membrane	2.36E-03
12	GO:0005886: plasma membrane	3.00E-03
13	GO:0010287: plastoglobule	3.18E-03
14	GO:0030176: integral component of endoplasmic reticulum membrane	3.30E-03
15	GO:0000139: Golgi membrane	3.47E-03
16	GO:0005618: cell wall	4.92E-03
17	GO:0031225: anchored component of membrane	7.52E-03
18	GO:0010319: stromule	8.42E-03
19	GO:0031969: chloroplast membrane	8.84E-03
20	GO:0009570: chloroplast stroma	1.18E-02
21	GO:0005819: spindle	1.38E-02
22	GO:0031902: late endosome membrane	1.47E-02
23	GO:0005747: mitochondrial respiratory chain complex I	2.22E-02
24	GO:0005576: extracellular region	2.54E-02
25	GO:0009579: thylakoid	2.78E-02
26	GO:0005759: mitochondrial matrix	3.41E-02
27	GO:0005802: trans-Golgi network	3.72E-02
28	GO:0016020: membrane	3.89E-02
29	GO:0005783: endoplasmic reticulum	4.04E-02
30	GO:0005768: endosome	4.23E-02