GO Enrichment Analysis of Co-expressed Genes with
AT3G62980
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008152: metabolic process | 1.11E-05 |
| 2 | GO:0043686: co-translational protein modification | 1.57E-05 |
| 3 | GO:0015936: coenzyme A metabolic process | 1.57E-05 |
| 4 | GO:0018026: peptidyl-lysine monomethylation | 4.12E-05 |
| 5 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 4.12E-05 |
| 6 | GO:0034059: response to anoxia | 1.11E-04 |
| 7 | GO:2000122: negative regulation of stomatal complex development | 1.53E-04 |
| 8 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.53E-04 |
| 9 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.98E-04 |
| 10 | GO:0031365: N-terminal protein amino acid modification | 1.98E-04 |
| 11 | GO:0030308: negative regulation of cell growth | 1.98E-04 |
| 12 | GO:0010375: stomatal complex patterning | 1.98E-04 |
| 13 | GO:0016120: carotene biosynthetic process | 1.98E-04 |
| 14 | GO:0042793: transcription from plastid promoter | 2.47E-04 |
| 15 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.97E-04 |
| 16 | GO:1900057: positive regulation of leaf senescence | 3.49E-04 |
| 17 | GO:0010374: stomatal complex development | 3.49E-04 |
| 18 | GO:0010052: guard cell differentiation | 4.60E-04 |
| 19 | GO:0009718: anthocyanin-containing compound biosynthetic process | 8.30E-04 |
| 20 | GO:0010143: cutin biosynthetic process | 8.97E-04 |
| 21 | GO:0007010: cytoskeleton organization | 1.10E-03 |
| 22 | GO:0009695: jasmonic acid biosynthetic process | 1.18E-03 |
| 23 | GO:0008299: isoprenoid biosynthetic process | 1.18E-03 |
| 24 | GO:0031408: oxylipin biosynthetic process | 1.25E-03 |
| 25 | GO:0016117: carotenoid biosynthetic process | 1.56E-03 |
| 26 | GO:0000413: protein peptidyl-prolyl isomerization | 1.65E-03 |
| 27 | GO:0008654: phospholipid biosynthetic process | 1.90E-03 |
| 28 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.99E-03 |
| 29 | GO:0010027: thylakoid membrane organization | 2.55E-03 |
| 30 | GO:0016126: sterol biosynthetic process | 2.55E-03 |
| 31 | GO:0042128: nitrate assimilation | 2.74E-03 |
| 32 | GO:0048573: photoperiodism, flowering | 2.84E-03 |
| 33 | GO:0015995: chlorophyll biosynthetic process | 2.84E-03 |
| 34 | GO:0009416: response to light stimulus | 3.57E-03 |
| 35 | GO:0009637: response to blue light | 3.58E-03 |
| 36 | GO:0045893: positive regulation of transcription, DNA-templated | 4.09E-03 |
| 37 | GO:0009644: response to high light intensity | 4.48E-03 |
| 38 | GO:0006857: oligopeptide transport | 5.46E-03 |
| 39 | GO:0006412: translation | 7.69E-03 |
| 40 | GO:0008380: RNA splicing | 1.10E-02 |
| 41 | GO:0009658: chloroplast organization | 1.32E-02 |
| 42 | GO:0016042: lipid catabolic process | 1.99E-02 |
| 43 | GO:0006397: mRNA processing | 2.09E-02 |
| 44 | GO:0009753: response to jasmonic acid | 2.14E-02 |
| 45 | GO:0009734: auxin-activated signaling pathway | 2.59E-02 |
| 46 | GO:0009611: response to wounding | 3.11E-02 |
| 47 | GO:0035556: intracellular signal transduction | 3.18E-02 |
| 48 | GO:0006457: protein folding | 3.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 2 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 3 | GO:0004321: fatty-acyl-CoA synthase activity | 1.57E-05 |
| 4 | GO:0050139: nicotinate-N-glucosyltransferase activity | 1.57E-05 |
| 5 | GO:0004420: hydroxymethylglutaryl-CoA reductase (NADPH) activity | 1.57E-05 |
| 6 | GO:0042282: hydroxymethylglutaryl-CoA reductase activity | 1.57E-05 |
| 7 | GO:0042586: peptide deformylase activity | 1.57E-05 |
| 8 | GO:0001872: (1->3)-beta-D-glucan binding | 1.11E-04 |
| 9 | GO:0016279: protein-lysine N-methyltransferase activity | 1.53E-04 |
| 10 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.53E-04 |
| 11 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.47E-04 |
| 12 | GO:0016207: 4-coumarate-CoA ligase activity | 5.18E-04 |
| 13 | GO:0042802: identical protein binding | 9.40E-04 |
| 14 | GO:0043424: protein histidine kinase binding | 1.18E-03 |
| 15 | GO:0016791: phosphatase activity | 2.26E-03 |
| 16 | GO:0016597: amino acid binding | 2.45E-03 |
| 17 | GO:0030247: polysaccharide binding | 2.84E-03 |
| 18 | GO:0005096: GTPase activator activity | 3.15E-03 |
| 19 | GO:0050661: NADP binding | 3.91E-03 |
| 20 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.48E-03 |
| 21 | GO:0015293: symporter activity | 4.60E-03 |
| 22 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.72E-03 |
| 23 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 6.24E-03 |
| 24 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 6.24E-03 |
| 25 | GO:0016874: ligase activity | 6.38E-03 |
| 26 | GO:0016746: transferase activity, transferring acyl groups | 6.78E-03 |
| 27 | GO:0019843: rRNA binding | 7.77E-03 |
| 28 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 7.91E-03 |
| 29 | GO:0008017: microtubule binding | 1.00E-02 |
| 30 | GO:0008194: UDP-glycosyltransferase activity | 1.05E-02 |
| 31 | GO:0016788: hydrolase activity, acting on ester bonds | 1.34E-02 |
| 32 | GO:0052689: carboxylic ester hydrolase activity | 1.65E-02 |
| 33 | GO:0004871: signal transducer activity | 1.81E-02 |
| 34 | GO:0005515: protein binding | 1.96E-02 |
| 35 | GO:0016757: transferase activity, transferring glycosyl groups | 2.46E-02 |
| 36 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080085: signal recognition particle, chloroplast targeting | 4.12E-05 |
| 2 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 4.12E-05 |
| 3 | GO:0009570: chloroplast stroma | 5.63E-05 |
| 4 | GO:0009533: chloroplast stromal thylakoid | 3.49E-04 |
| 5 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 4.60E-04 |
| 6 | GO:0008180: COP9 signalosome | 5.18E-04 |
| 7 | GO:0009507: chloroplast | 5.31E-04 |
| 8 | GO:0009508: plastid chromosome | 8.30E-04 |
| 9 | GO:0000312: plastid small ribosomal subunit | 8.97E-04 |
| 10 | GO:0046658: anchored component of plasma membrane | 9.78E-04 |
| 11 | GO:0009295: nucleoid | 2.36E-03 |
| 12 | GO:0030529: intracellular ribonucleoprotein complex | 2.55E-03 |
| 13 | GO:0019005: SCF ubiquitin ligase complex | 3.05E-03 |
| 14 | GO:0031977: thylakoid lumen | 4.02E-03 |
| 15 | GO:0009534: chloroplast thylakoid | 4.30E-03 |
| 16 | GO:0000502: proteasome complex | 5.21E-03 |
| 17 | GO:0009941: chloroplast envelope | 6.74E-03 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 7.77E-03 |
| 19 | GO:0005623: cell | 7.91E-03 |
| 20 | GO:0022627: cytosolic small ribosomal subunit | 1.18E-02 |
| 21 | GO:0005874: microtubule | 1.50E-02 |
| 22 | GO:0009535: chloroplast thylakoid membrane | 1.62E-02 |
| 23 | GO:0043231: intracellular membrane-bounded organelle | 2.18E-02 |
| 24 | GO:0005777: peroxisome | 3.38E-02 |
| 25 | GO:0009579: thylakoid | 3.48E-02 |
| 26 | GO:0031225: anchored component of membrane | 4.20E-02 |
| 27 | GO:0005622: intracellular | 4.61E-02 |