GO Enrichment Analysis of Co-expressed Genes with
AT3G62580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 2 | GO:0006983: ER overload response | 0.00E+00 |
| 3 | GO:0006793: phosphorus metabolic process | 0.00E+00 |
| 4 | GO:0072722: response to amitrole | 0.00E+00 |
| 5 | GO:0034976: response to endoplasmic reticulum stress | 1.71E-05 |
| 6 | GO:0006874: cellular calcium ion homeostasis | 2.41E-05 |
| 7 | GO:0010726: positive regulation of hydrogen peroxide metabolic process | 1.40E-04 |
| 8 | GO:0048455: stamen formation | 1.40E-04 |
| 9 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 1.40E-04 |
| 10 | GO:0009821: alkaloid biosynthetic process | 1.47E-04 |
| 11 | GO:0009615: response to virus | 1.48E-04 |
| 12 | GO:0010150: leaf senescence | 2.72E-04 |
| 13 | GO:0051788: response to misfolded protein | 3.20E-04 |
| 14 | GO:0043066: negative regulation of apoptotic process | 3.20E-04 |
| 15 | GO:1902000: homogentisate catabolic process | 3.20E-04 |
| 16 | GO:0051592: response to calcium ion | 3.20E-04 |
| 17 | GO:0010351: lithium ion transport | 5.26E-04 |
| 18 | GO:0010272: response to silver ion | 5.26E-04 |
| 19 | GO:0009072: aromatic amino acid family metabolic process | 5.26E-04 |
| 20 | GO:0016998: cell wall macromolecule catabolic process | 6.07E-04 |
| 21 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.63E-04 |
| 22 | GO:0006107: oxaloacetate metabolic process | 7.53E-04 |
| 23 | GO:0071323: cellular response to chitin | 7.53E-04 |
| 24 | GO:0006882: cellular zinc ion homeostasis | 7.53E-04 |
| 25 | GO:0048194: Golgi vesicle budding | 7.53E-04 |
| 26 | GO:0009620: response to fungus | 8.38E-04 |
| 27 | GO:0006734: NADH metabolic process | 9.98E-04 |
| 28 | GO:0030308: negative regulation of cell growth | 1.26E-03 |
| 29 | GO:0006461: protein complex assembly | 1.26E-03 |
| 30 | GO:0007029: endoplasmic reticulum organization | 1.26E-03 |
| 31 | GO:0009751: response to salicylic acid | 1.32E-03 |
| 32 | GO:0043248: proteasome assembly | 1.55E-03 |
| 33 | GO:0035435: phosphate ion transmembrane transport | 1.55E-03 |
| 34 | GO:1900425: negative regulation of defense response to bacterium | 1.55E-03 |
| 35 | GO:0002238: response to molecule of fungal origin | 1.55E-03 |
| 36 | GO:0010942: positive regulation of cell death | 1.55E-03 |
| 37 | GO:0006468: protein phosphorylation | 1.59E-03 |
| 38 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.86E-03 |
| 39 | GO:0006952: defense response | 2.03E-03 |
| 40 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.14E-03 |
| 41 | GO:0000338: protein deneddylation | 2.18E-03 |
| 42 | GO:0042773: ATP synthesis coupled electron transport | 2.18E-03 |
| 43 | GO:0030026: cellular manganese ion homeostasis | 2.18E-03 |
| 44 | GO:0048528: post-embryonic root development | 2.18E-03 |
| 45 | GO:0006499: N-terminal protein myristoylation | 2.45E-03 |
| 46 | GO:0009819: drought recovery | 2.52E-03 |
| 47 | GO:1900150: regulation of defense response to fungus | 2.52E-03 |
| 48 | GO:0009850: auxin metabolic process | 2.52E-03 |
| 49 | GO:0043068: positive regulation of programmed cell death | 2.52E-03 |
| 50 | GO:0010043: response to zinc ion | 2.56E-03 |
| 51 | GO:0009735: response to cytokinin | 2.80E-03 |
| 52 | GO:0006972: hyperosmotic response | 2.88E-03 |
| 53 | GO:0051865: protein autoubiquitination | 3.26E-03 |
| 54 | GO:0046685: response to arsenic-containing substance | 3.26E-03 |
| 55 | GO:0043067: regulation of programmed cell death | 3.65E-03 |
| 56 | GO:0010205: photoinhibition | 3.65E-03 |
| 57 | GO:0055062: phosphate ion homeostasis | 4.06E-03 |
| 58 | GO:0007064: mitotic sister chromatid cohesion | 4.06E-03 |
| 59 | GO:0006032: chitin catabolic process | 4.06E-03 |
| 60 | GO:0043069: negative regulation of programmed cell death | 4.06E-03 |
| 61 | GO:0000272: polysaccharide catabolic process | 4.48E-03 |
| 62 | GO:0000038: very long-chain fatty acid metabolic process | 4.48E-03 |
| 63 | GO:0012501: programmed cell death | 4.92E-03 |
| 64 | GO:0015706: nitrate transport | 4.92E-03 |
| 65 | GO:0045454: cell redox homeostasis | 5.31E-03 |
| 66 | GO:0006626: protein targeting to mitochondrion | 5.37E-03 |
| 67 | GO:0006108: malate metabolic process | 5.37E-03 |
| 68 | GO:0002237: response to molecule of bacterial origin | 5.84E-03 |
| 69 | GO:0010167: response to nitrate | 6.32E-03 |
| 70 | GO:0009651: response to salt stress | 6.39E-03 |
| 71 | GO:2000377: regulation of reactive oxygen species metabolic process | 7.32E-03 |
| 72 | GO:0010073: meristem maintenance | 7.84E-03 |
| 73 | GO:0009058: biosynthetic process | 9.11E-03 |
| 74 | GO:0042742: defense response to bacterium | 9.37E-03 |
| 75 | GO:0006012: galactose metabolic process | 9.48E-03 |
| 76 | GO:0006814: sodium ion transport | 1.25E-02 |
| 77 | GO:0009646: response to absence of light | 1.25E-02 |
| 78 | GO:0002229: defense response to oomycetes | 1.37E-02 |
| 79 | GO:0010193: response to ozone | 1.37E-02 |
| 80 | GO:0007166: cell surface receptor signaling pathway | 1.37E-02 |
| 81 | GO:0009617: response to bacterium | 1.43E-02 |
| 82 | GO:0009611: response to wounding | 1.48E-02 |
| 83 | GO:0030163: protein catabolic process | 1.51E-02 |
| 84 | GO:0006810: transport | 1.67E-02 |
| 85 | GO:0006508: proteolysis | 1.68E-02 |
| 86 | GO:0046686: response to cadmium ion | 1.83E-02 |
| 87 | GO:0010029: regulation of seed germination | 1.86E-02 |
| 88 | GO:0006974: cellular response to DNA damage stimulus | 1.93E-02 |
| 89 | GO:0009627: systemic acquired resistance | 1.93E-02 |
| 90 | GO:0042128: nitrate assimilation | 1.93E-02 |
| 91 | GO:0006457: protein folding | 1.99E-02 |
| 92 | GO:0009723: response to ethylene | 2.14E-02 |
| 93 | GO:0048767: root hair elongation | 2.23E-02 |
| 94 | GO:0009407: toxin catabolic process | 2.31E-02 |
| 95 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.38E-02 |
| 96 | GO:0045087: innate immune response | 2.55E-02 |
| 97 | GO:0009853: photorespiration | 2.55E-02 |
| 98 | GO:0006099: tricarboxylic acid cycle | 2.63E-02 |
| 99 | GO:0006839: mitochondrial transport | 2.80E-02 |
| 100 | GO:0009737: response to abscisic acid | 2.90E-02 |
| 101 | GO:0042542: response to hydrogen peroxide | 2.97E-02 |
| 102 | GO:0009640: photomorphogenesis | 3.06E-02 |
| 103 | GO:0009744: response to sucrose | 3.06E-02 |
| 104 | GO:0009644: response to high light intensity | 3.23E-02 |
| 105 | GO:0008643: carbohydrate transport | 3.23E-02 |
| 106 | GO:0009636: response to toxic substance | 3.32E-02 |
| 107 | GO:0006855: drug transmembrane transport | 3.41E-02 |
| 108 | GO:0031347: regulation of defense response | 3.50E-02 |
| 109 | GO:0006812: cation transport | 3.59E-02 |
| 110 | GO:0009846: pollen germination | 3.59E-02 |
| 111 | GO:0042538: hyperosmotic salinity response | 3.59E-02 |
| 112 | GO:0009753: response to jasmonic acid | 3.64E-02 |
| 113 | GO:0009809: lignin biosynthetic process | 3.78E-02 |
| 114 | GO:0009585: red, far-red light phototransduction | 3.78E-02 |
| 115 | GO:0006096: glycolytic process | 4.26E-02 |
| 116 | GO:0048316: seed development | 4.35E-02 |
| 117 | GO:0009624: response to nematode | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 2 | GO:0016034: maleylacetoacetate isomerase activity | 0.00E+00 |
| 3 | GO:0032442: phenylcoumaran benzylic ether reductase activity | 0.00E+00 |
| 4 | GO:0005496: steroid binding | 1.34E-07 |
| 5 | GO:0003756: protein disulfide isomerase activity | 4.31E-05 |
| 6 | GO:0016920: pyroglutamyl-peptidase activity | 1.40E-04 |
| 7 | GO:0016844: strictosidine synthase activity | 1.76E-04 |
| 8 | GO:0050736: O-malonyltransferase activity | 3.20E-04 |
| 9 | GO:0015036: disulfide oxidoreductase activity | 3.20E-04 |
| 10 | GO:0004103: choline kinase activity | 3.20E-04 |
| 11 | GO:0005217: intracellular ligand-gated ion channel activity | 4.07E-04 |
| 12 | GO:0008061: chitin binding | 4.07E-04 |
| 13 | GO:0004970: ionotropic glutamate receptor activity | 4.07E-04 |
| 14 | GO:0004190: aspartic-type endopeptidase activity | 4.07E-04 |
| 15 | GO:0016805: dipeptidase activity | 5.26E-04 |
| 16 | GO:0008430: selenium binding | 5.26E-04 |
| 17 | GO:0001653: peptide receptor activity | 7.53E-04 |
| 18 | GO:0010178: IAA-amino acid conjugate hydrolase activity | 7.53E-04 |
| 19 | GO:0004301: epoxide hydrolase activity | 9.98E-04 |
| 20 | GO:0015368: calcium:cation antiporter activity | 9.98E-04 |
| 21 | GO:0004737: pyruvate decarboxylase activity | 9.98E-04 |
| 22 | GO:0015369: calcium:proton antiporter activity | 9.98E-04 |
| 23 | GO:0004040: amidase activity | 1.26E-03 |
| 24 | GO:0031593: polyubiquitin binding | 1.55E-03 |
| 25 | GO:0016615: malate dehydrogenase activity | 1.55E-03 |
| 26 | GO:0030976: thiamine pyrophosphate binding | 1.55E-03 |
| 27 | GO:0004012: phospholipid-translocating ATPase activity | 1.86E-03 |
| 28 | GO:0030060: L-malate dehydrogenase activity | 1.86E-03 |
| 29 | GO:0003978: UDP-glucose 4-epimerase activity | 1.86E-03 |
| 30 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 2.18E-03 |
| 31 | GO:0016831: carboxy-lyase activity | 2.18E-03 |
| 32 | GO:0008235: metalloexopeptidase activity | 2.18E-03 |
| 33 | GO:0052747: sinapyl alcohol dehydrogenase activity | 2.52E-03 |
| 34 | GO:0015491: cation:cation antiporter activity | 2.52E-03 |
| 35 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 2.52E-03 |
| 36 | GO:0005524: ATP binding | 3.07E-03 |
| 37 | GO:0000287: magnesium ion binding | 3.14E-03 |
| 38 | GO:0004364: glutathione transferase activity | 3.47E-03 |
| 39 | GO:0043531: ADP binding | 3.62E-03 |
| 40 | GO:0030955: potassium ion binding | 3.65E-03 |
| 41 | GO:0015112: nitrate transmembrane transporter activity | 3.65E-03 |
| 42 | GO:0004743: pyruvate kinase activity | 3.65E-03 |
| 43 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.90E-03 |
| 44 | GO:0004568: chitinase activity | 4.06E-03 |
| 45 | GO:0004177: aminopeptidase activity | 4.48E-03 |
| 46 | GO:0004674: protein serine/threonine kinase activity | 4.62E-03 |
| 47 | GO:0005515: protein binding | 4.67E-03 |
| 48 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 4.92E-03 |
| 49 | GO:0015114: phosphate ion transmembrane transporter activity | 5.37E-03 |
| 50 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.37E-03 |
| 51 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.37E-03 |
| 52 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.37E-03 |
| 53 | GO:0051536: iron-sulfur cluster binding | 7.32E-03 |
| 54 | GO:0003954: NADH dehydrogenase activity | 7.32E-03 |
| 55 | GO:0008514: organic anion transmembrane transporter activity | 1.01E-02 |
| 56 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.11E-02 |
| 57 | GO:0050662: coenzyme binding | 1.25E-02 |
| 58 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.37E-02 |
| 59 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.64E-02 |
| 60 | GO:0008237: metallopeptidase activity | 1.64E-02 |
| 61 | GO:0016740: transferase activity | 1.85E-02 |
| 62 | GO:0015238: drug transmembrane transporter activity | 2.23E-02 |
| 63 | GO:0030145: manganese ion binding | 2.39E-02 |
| 64 | GO:0061630: ubiquitin protein ligase activity | 2.42E-02 |
| 65 | GO:0016301: kinase activity | 2.65E-02 |
| 66 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.80E-02 |
| 67 | GO:0016298: lipase activity | 3.87E-02 |
| 68 | GO:0005215: transporter activity | 3.94E-02 |
| 69 | GO:0043565: sequence-specific DNA binding | 3.94E-02 |
| 70 | GO:0031625: ubiquitin protein ligase binding | 4.06E-02 |
| 71 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.35E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 2 | GO:0005783: endoplasmic reticulum | 1.81E-08 |
| 3 | GO:0016021: integral component of membrane | 2.07E-05 |
| 4 | GO:0005788: endoplasmic reticulum lumen | 1.60E-04 |
| 5 | GO:0005773: vacuole | 1.77E-04 |
| 6 | GO:0005886: plasma membrane | 2.15E-04 |
| 7 | GO:0031314: extrinsic component of mitochondrial inner membrane | 3.20E-04 |
| 8 | GO:0005789: endoplasmic reticulum membrane | 3.52E-04 |
| 9 | GO:0005794: Golgi apparatus | 8.97E-04 |
| 10 | GO:0030660: Golgi-associated vesicle membrane | 9.98E-04 |
| 11 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 9.98E-04 |
| 12 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.52E-03 |
| 13 | GO:0000326: protein storage vacuole | 2.88E-03 |
| 14 | GO:0008180: COP9 signalosome | 3.26E-03 |
| 15 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.65E-03 |
| 16 | GO:0005765: lysosomal membrane | 4.48E-03 |
| 17 | GO:0031966: mitochondrial membrane | 4.52E-03 |
| 18 | GO:0005750: mitochondrial respiratory chain complex III | 5.84E-03 |
| 19 | GO:0005829: cytosol | 7.80E-03 |
| 20 | GO:0045271: respiratory chain complex I | 7.84E-03 |
| 21 | GO:0016020: membrane | 1.18E-02 |
| 22 | GO:0019898: extrinsic component of membrane | 1.31E-02 |
| 23 | GO:0032580: Golgi cisterna membrane | 1.58E-02 |
| 24 | GO:0005774: vacuolar membrane | 2.06E-02 |
| 25 | GO:0022625: cytosolic large ribosomal subunit | 2.42E-02 |
| 26 | GO:0005743: mitochondrial inner membrane | 3.16E-02 |
| 27 | GO:0000502: proteasome complex | 3.78E-02 |
| 28 | GO:0005635: nuclear envelope | 3.97E-02 |
| 29 | GO:0005747: mitochondrial respiratory chain complex I | 4.35E-02 |
| 30 | GO:0010008: endosome membrane | 4.35E-02 |