Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G61580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015979: photosynthesis5.88E-06
2GO:0015995: chlorophyll biosynthetic process1.30E-05
3GO:0009765: photosynthesis, light harvesting3.75E-05
4GO:0010189: vitamin E biosynthetic process7.81E-05
5GO:0009645: response to low light intensity stimulus9.36E-05
6GO:0051510: regulation of unidimensional cell growth9.36E-05
7GO:0009769: photosynthesis, light harvesting in photosystem II9.36E-05
8GO:0009723: response to ethylene2.02E-04
9GO:0018107: peptidyl-threonine phosphorylation2.43E-04
10GO:0009768: photosynthesis, light harvesting in photosystem I3.51E-04
11GO:0009269: response to desiccation3.74E-04
12GO:0009741: response to brassinosteroid5.18E-04
13GO:0009791: post-embryonic development5.68E-04
14GO:0018298: protein-chromophore linkage8.92E-04
15GO:0010218: response to far red light9.49E-04
16GO:0006865: amino acid transport1.01E-03
17GO:0009637: response to blue light1.04E-03
18GO:0010114: response to red light1.22E-03
19GO:0009644: response to high light intensity1.28E-03
20GO:0006812: cation transport1.41E-03
21GO:0018105: peptidyl-serine phosphorylation1.91E-03
22GO:0009742: brassinosteroid mediated signaling pathway1.95E-03
23GO:0007623: circadian rhythm2.70E-03
24GO:0009826: unidimensional cell growth3.53E-03
25GO:0009651: response to salt stress3.58E-03
26GO:0045454: cell redox homeostasis4.75E-03
27GO:0032259: methylation5.32E-03
28GO:0008152: metabolic process5.86E-03
29GO:0009416: response to light stimulus8.16E-03
30GO:0035556: intracellular signal transduction8.47E-03
31GO:0009409: response to cold1.66E-02
32GO:0046686: response to cadmium ion1.84E-02
33GO:0009737: response to abscisic acid2.30E-02
34GO:0006508: proteolysis2.99E-02
35GO:0055114: oxidation-reduction process3.29E-02
RankGO TermAdjusted P value
1GO:0045550: geranylgeranyl reductase activity0.00E+00
2GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
3GO:0080045: quercetin 3'-O-glucosyltransferase activity8.96E-06
4GO:0010277: chlorophyllide a oxygenase [overall] activity1.68E-05
5GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.64E-05
6GO:0051537: 2 iron, 2 sulfur cluster binding2.98E-05
7GO:0080046: quercetin 4'-O-glucosyltransferase activity6.35E-05
8GO:0004190: aspartic-type endopeptidase activity2.85E-04
9GO:0031409: pigment binding3.07E-04
10GO:0016168: chlorophyll binding7.80E-04
11GO:0015171: amino acid transmembrane transporter activity1.58E-03
12GO:0080043: quercetin 3-O-glucosyltransferase activity1.76E-03
13GO:0080044: quercetin 7-O-glucosyltransferase activity1.76E-03
14GO:0015035: protein disulfide oxidoreductase activity1.91E-03
15GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.21E-03
16GO:0015297: antiporter activity2.62E-03
17GO:0008194: UDP-glycosyltransferase activity2.91E-03
18GO:0008168: methyltransferase activity3.53E-03
19GO:0008233: peptidase activity4.15E-03
20GO:0004674: protein serine/threonine kinase activity5.24E-03
21GO:0009055: electron carrier activity5.75E-03
22GO:0005506: iron ion binding1.33E-02
23GO:0004672: protein kinase activity1.76E-02
24GO:0016301: kinase activity1.80E-02
25GO:0016757: transferase activity, transferring glycosyl groups3.21E-02
26GO:0046872: metal ion binding3.92E-02
RankGO TermAdjusted P value
1GO:0009535: chloroplast thylakoid membrane1.02E-05
2GO:0009517: PSII associated light-harvesting complex II3.75E-05
3GO:0030660: Golgi-associated vesicle membrane3.75E-05
4GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane3.75E-05
5GO:0009941: chloroplast envelope4.44E-05
6GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane1.10E-04
7GO:0009538: photosystem I reaction center1.10E-04
8GO:0005765: lysosomal membrane2.02E-04
9GO:0030076: light-harvesting complex2.85E-04
10GO:0042651: thylakoid membrane3.51E-04
11GO:0009522: photosystem I5.42E-04
12GO:0009523: photosystem II5.68E-04
13GO:0009579: thylakoid6.69E-04
14GO:0009534: chloroplast thylakoid6.76E-04
15GO:0010008: endosome membrane1.69E-03
16GO:0009706: chloroplast inner membrane1.87E-03
17GO:0010287: plastoglobule2.10E-03
18GO:0009507: chloroplast2.58E-03
19GO:0031969: chloroplast membrane4.20E-03
20GO:0043231: intracellular membrane-bounded organelle5.86E-03
21GO:0016020: membrane1.22E-02
22GO:0005768: endosome1.24E-02
23GO:0005829: cytosol1.38E-02
24GO:0005794: Golgi apparatus1.92E-02
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Gene type



Gene DE type