co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G60820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071456: cellular response to hypoxia	2.22E-05
2	GO:0015865: purine nucleotide transport	3.21E-05
3	GO:0046902: regulation of mitochondrial membrane permeability	8.79E-05
4	GO:0072583: clathrin-dependent endocytosis	8.79E-05
5	GO:2000114: regulation of establishment of cell polarity	8.79E-05
6	GO:0005513: detection of calcium ion	1.59E-04
7	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.98E-04
8	GO:0002238: response to molecule of fungal origin	1.98E-04
9	GO:0000911: cytokinesis by cell plate formation	2.39E-04
10	GO:0006468: protein phosphorylation	2.88E-04
11	GO:0048766: root hair initiation	3.27E-04
12	GO:0043068: positive regulation of programmed cell death	3.27E-04
13	GO:0009808: lignin metabolic process	3.73E-04
14	GO:0051865: protein autoubiquitination	4.21E-04
15	GO:0052544: defense response by callose deposition in cell wall	5.71E-04
16	GO:0000266: mitochondrial fission	6.23E-04
17	GO:0006790: sulfur compound metabolic process	6.23E-04
18	GO:0012501: programmed cell death	6.23E-04
19	GO:0006626: protein targeting to mitochondrion	6.76E-04
20	GO:0046854: phosphatidylinositol phosphorylation	7.88E-04
21	GO:0000162: tryptophan biosynthetic process	8.44E-04
22	GO:0016192: vesicle-mediated transport	1.07E-03
23	GO:0030433: ubiquitin-dependent ERAD pathway	1.08E-03
24	GO:0019722: calcium-mediated signaling	1.21E-03
25	GO:0010091: trichome branching	1.21E-03
26	GO:0010051: xylem and phloem pattern formation	1.34E-03
27	GO:0009851: auxin biosynthetic process	1.54E-03
28	GO:0009630: gravitropism	1.68E-03
29	GO:0016311: dephosphorylation	2.38E-03
30	GO:0006839: mitochondrial transport	3.15E-03
31	GO:0009846: pollen germination	4.00E-03
32	GO:0042538: hyperosmotic salinity response	4.00E-03
33	GO:0042742: defense response to bacterium	5.22E-03
34	GO:0018105: peptidyl-serine phosphorylation	5.45E-03
35	GO:0015031: protein transport	6.62E-03
36	GO:0006810: transport	7.65E-03
37	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	8.43E-03
38	GO:0007166: cell surface receptor signaling pathway	8.56E-03
39	GO:0009617: response to bacterium	8.82E-03
40	GO:0007165: signal transduction	1.09E-02
41	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.26E-02
42	GO:0010200: response to chitin	1.26E-02
43	GO:0046777: protein autophosphorylation	1.29E-02
44	GO:0006886: intracellular protein transport	1.43E-02
45	GO:0009735: response to cytokinin	2.29E-02
46	GO:0009738: abscisic acid-activated signaling pathway	2.38E-02
47	GO:0009555: pollen development	2.44E-02
48	GO:0035556: intracellular signal transduction	2.54E-02
49	GO:0055085: transmembrane transport	2.89E-02
50	GO:0006952: defense response	2.91E-02
51	GO:0009414: response to water deprivation	3.97E-02

Rank	GO Term	Adjusted P value
1	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
2	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.21E-05
3	GO:0005509: calcium ion binding	5.05E-05
4	GO:0019003: GDP binding	5.78E-05
5	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	5.78E-05
6	GO:0004674: protein serine/threonine kinase activity	1.18E-04
7	GO:0004834: tryptophan synthase activity	1.22E-04
8	GO:0004040: amidase activity	1.59E-04
9	GO:0005471: ATP:ADP antiporter activity	1.59E-04
10	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.39E-04
11	GO:0008320: protein transmembrane transporter activity	2.82E-04
12	GO:0004190: aspartic-type endopeptidase activity	7.88E-04
13	GO:0043424: protein histidine kinase binding	9.61E-04
14	GO:0030276: clathrin binding	1.40E-03
15	GO:0003924: GTPase activity	1.48E-03
16	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.22E-03
17	GO:0030247: polysaccharide binding	2.30E-03
18	GO:0004683: calmodulin-dependent protein kinase activity	2.30E-03
19	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.71E-03
20	GO:0005525: GTP binding	4.25E-03
21	GO:0016301: kinase activity	5.22E-03
22	GO:0008017: microtubule binding	8.05E-03
23	GO:0050660: flavin adenine dinucleotide binding	1.17E-02
24	GO:0061630: ubiquitin protein ligase activity	1.28E-02
25	GO:0042803: protein homodimerization activity	1.45E-02
26	GO:0009055: electron carrier activity	1.71E-02
27	GO:0005524: ATP binding	1.88E-02
28	GO:0005516: calmodulin binding	3.27E-02

Rank	GO Term	Adjusted P value
1	GO:0045334: clathrin-coated endocytic vesicle	1.21E-05
2	GO:0005783: endoplasmic reticulum	2.70E-05
3	GO:0030134: ER to Golgi transport vesicle	3.21E-05
4	GO:0032580: Golgi cisterna membrane	5.84E-05
5	GO:0030660: Golgi-associated vesicle membrane	1.22E-04
6	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.22E-04
7	GO:0005886: plasma membrane	2.54E-04
8	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.27E-04
9	GO:0016021: integral component of membrane	4.60E-04
10	GO:0005765: lysosomal membrane	5.71E-04
11	GO:0005789: endoplasmic reticulum membrane	1.09E-03
12	GO:0009504: cell plate	1.54E-03
13	GO:0031966: mitochondrial membrane	4.00E-03
14	GO:0009524: phragmoplast	6.47E-03
15	GO:0005874: microtubule	1.20E-02
16	GO:0005743: mitochondrial inner membrane	1.54E-02
17	GO:0005773: vacuole	2.78E-02
18	GO:0016020: membrane	2.97E-02
19	GO:0031225: anchored component of membrane	3.35E-02