Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G60245

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006412: translation1.65E-151
2GO:0042254: ribosome biogenesis3.83E-60
3GO:0000027: ribosomal large subunit assembly2.20E-15
4GO:0000028: ribosomal small subunit assembly8.68E-09
5GO:0009955: adaxial/abaxial pattern specification5.58E-07
6GO:0009967: positive regulation of signal transduction1.11E-06
7GO:0009735: response to cytokinin1.56E-06
8GO:0002181: cytoplasmic translation4.13E-06
9GO:0006407: rRNA export from nucleus1.50E-04
10GO:0030490: maturation of SSU-rRNA1.50E-04
11GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.50E-04
12GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.50E-04
13GO:0009409: response to cold3.35E-04
14GO:0048569: post-embryonic animal organ development3.42E-04
15GO:0006414: translational elongation3.87E-04
16GO:0009965: leaf morphogenesis5.44E-04
17GO:1902626: assembly of large subunit precursor of preribosome5.61E-04
18GO:0010476: gibberellin mediated signaling pathway5.61E-04
19GO:0042256: mature ribosome assembly5.61E-04
20GO:0090506: axillary shoot meristem initiation5.61E-04
21GO:0071215: cellular response to abscisic acid stimulus7.93E-04
22GO:0070301: cellular response to hydrogen peroxide8.03E-04
23GO:0006241: CTP biosynthetic process8.03E-04
24GO:0006165: nucleoside diphosphate phosphorylation8.03E-04
25GO:0006228: UTP biosynthetic process8.03E-04
26GO:0044205: 'de novo' UMP biosynthetic process1.06E-03
27GO:2000032: regulation of secondary shoot formation1.06E-03
28GO:0006183: GTP biosynthetic process1.06E-03
29GO:0071493: cellular response to UV-B1.35E-03
30GO:0000470: maturation of LSU-rRNA1.65E-03
31GO:0000911: cytokinesis by cell plate formation1.98E-03
32GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process2.33E-03
33GO:0006526: arginine biosynthetic process3.08E-03
34GO:0006002: fructose 6-phosphate metabolic process3.08E-03
35GO:0008283: cell proliferation3.98E-03
36GO:0009644: response to high light intensity4.30E-03
37GO:0010015: root morphogenesis4.80E-03
38GO:0006913: nucleocytoplasmic transport4.80E-03
39GO:0010229: inflorescence development5.75E-03
40GO:0010102: lateral root morphogenesis5.75E-03
41GO:0006417: regulation of translation5.92E-03
42GO:0046686: response to cadmium ion6.17E-03
43GO:0006541: glutamine metabolic process6.25E-03
44GO:0015992: proton transport8.97E-03
45GO:0009845: seed germination1.03E-02
46GO:0009793: embryo development ending in seed dormancy1.23E-02
47GO:0009749: response to glucose1.41E-02
48GO:0009791: post-embryonic development1.41E-02
49GO:0032502: developmental process1.55E-02
50GO:0010090: trichome morphogenesis1.62E-02
51GO:0010252: auxin homeostasis1.69E-02
52GO:0009651: response to salt stress2.31E-02
53GO:0010043: response to zinc ion2.56E-02
54GO:0006096: glycolytic process4.56E-02
55GO:0048367: shoot system development4.67E-02
56GO:0009620: response to fungus4.88E-02
RankGO TermAdjusted P value
1GO:0003735: structural constituent of ribosome2.21E-184
2GO:0003729: mRNA binding8.11E-34
3GO:0019843: rRNA binding6.98E-13
4GO:0005078: MAP-kinase scaffold activity1.11E-06
5GO:0008097: 5S rRNA binding9.63E-06
6GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity1.50E-04
7GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity5.61E-04
8GO:0032947: protein complex scaffold5.61E-04
9GO:0070181: small ribosomal subunit rRNA binding5.61E-04
10GO:0004550: nucleoside diphosphate kinase activity8.03E-04
11GO:0003872: 6-phosphofructokinase activity2.33E-03
12GO:0003746: translation elongation factor activity2.74E-02
13GO:0004871: signal transducer activity3.18E-02
14GO:0003723: RNA binding3.84E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome4.39E-135
2GO:0022625: cytosolic large ribosomal subunit1.90E-118
3GO:0005840: ribosome2.79E-116
4GO:0022627: cytosolic small ribosomal subunit3.50E-57
5GO:0005737: cytoplasm1.03E-46
6GO:0005829: cytosol6.43E-39
7GO:0005730: nucleolus4.33E-36
8GO:0009506: plasmodesma5.03E-32
9GO:0015934: large ribosomal subunit5.64E-26
10GO:0016020: membrane3.41E-21
11GO:0005774: vacuolar membrane4.50E-18
12GO:0005773: vacuole6.61E-13
13GO:0005618: cell wall6.81E-12
14GO:0015935: small ribosomal subunit9.87E-11
15GO:0005886: plasma membrane1.70E-07
16GO:0009507: chloroplast1.72E-06
17GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex1.50E-04
18GO:0005951: carbamoyl-phosphate synthase complex1.50E-04
19GO:0030686: 90S preribosome1.50E-04
20GO:0005853: eukaryotic translation elongation factor 1 complex5.61E-04
21GO:0005622: intracellular8.93E-03
22GO:0005834: heterotrimeric G-protein complex4.78E-02
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Gene type



Gene DE type