GO Enrichment Analysis of Co-expressed Genes with
AT3G59920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 2 | GO:0010482: regulation of epidermal cell division | 3.25E-05 |
| 3 | GO:0044376: RNA polymerase II complex import to nucleus | 3.25E-05 |
| 4 | GO:1990022: RNA polymerase III complex localization to nucleus | 3.25E-05 |
| 5 | GO:0033306: phytol metabolic process | 3.25E-05 |
| 6 | GO:0019752: carboxylic acid metabolic process | 8.18E-05 |
| 7 | GO:0031648: protein destabilization | 8.18E-05 |
| 8 | GO:0009410: response to xenobiotic stimulus | 1.42E-04 |
| 9 | GO:0046686: response to cadmium ion | 1.54E-04 |
| 10 | GO:0009113: purine nucleobase biosynthetic process | 2.11E-04 |
| 11 | GO:0001676: long-chain fatty acid metabolic process | 2.11E-04 |
| 12 | GO:0006164: purine nucleotide biosynthetic process | 2.11E-04 |
| 13 | GO:0051567: histone H3-K9 methylation | 2.85E-04 |
| 14 | GO:0010405: arabinogalactan protein metabolic process | 4.48E-04 |
| 15 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 4.48E-04 |
| 16 | GO:0006099: tricarboxylic acid cycle | 4.61E-04 |
| 17 | GO:0045454: cell redox homeostasis | 4.73E-04 |
| 18 | GO:1900056: negative regulation of leaf senescence | 6.27E-04 |
| 19 | GO:0006605: protein targeting | 7.22E-04 |
| 20 | GO:0006102: isocitrate metabolic process | 7.22E-04 |
| 21 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 7.22E-04 |
| 22 | GO:0006486: protein glycosylation | 7.51E-04 |
| 23 | GO:0006096: glycolytic process | 8.81E-04 |
| 24 | GO:0006189: 'de novo' IMP biosynthetic process | 9.20E-04 |
| 25 | GO:0046685: response to arsenic-containing substance | 9.20E-04 |
| 26 | GO:0006098: pentose-phosphate shunt | 9.20E-04 |
| 27 | GO:0019432: triglyceride biosynthetic process | 9.20E-04 |
| 28 | GO:0030042: actin filament depolymerization | 1.02E-03 |
| 29 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 1.02E-03 |
| 30 | GO:0048765: root hair cell differentiation | 1.24E-03 |
| 31 | GO:0006094: gluconeogenesis | 1.47E-03 |
| 32 | GO:0046688: response to copper ion | 1.72E-03 |
| 33 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.83E-03 |
| 34 | GO:0000027: ribosomal large subunit assembly | 1.99E-03 |
| 35 | GO:0009863: salicylic acid mediated signaling pathway | 1.99E-03 |
| 36 | GO:0006825: copper ion transport | 2.12E-03 |
| 37 | GO:0010026: trichome differentiation | 2.12E-03 |
| 38 | GO:0009814: defense response, incompatible interaction | 2.40E-03 |
| 39 | GO:0031348: negative regulation of defense response | 2.40E-03 |
| 40 | GO:0019722: calcium-mediated signaling | 2.69E-03 |
| 41 | GO:0006520: cellular amino acid metabolic process | 3.15E-03 |
| 42 | GO:0016192: vesicle-mediated transport | 3.53E-03 |
| 43 | GO:0010193: response to ozone | 3.63E-03 |
| 44 | GO:0030163: protein catabolic process | 3.97E-03 |
| 45 | GO:0015031: protein transport | 4.09E-03 |
| 46 | GO:0006886: intracellular protein transport | 4.14E-03 |
| 47 | GO:0016579: protein deubiquitination | 4.49E-03 |
| 48 | GO:0008152: metabolic process | 5.44E-03 |
| 49 | GO:0006631: fatty acid metabolic process | 7.43E-03 |
| 50 | GO:0009846: pollen germination | 9.22E-03 |
| 51 | GO:0051301: cell division | 9.54E-03 |
| 52 | GO:0051603: proteolysis involved in cellular protein catabolic process | 9.93E-03 |
| 53 | GO:0055114: oxidation-reduction process | 1.01E-02 |
| 54 | GO:0009553: embryo sac development | 1.22E-02 |
| 55 | GO:0018105: peptidyl-serine phosphorylation | 1.27E-02 |
| 56 | GO:0006396: RNA processing | 1.27E-02 |
| 57 | GO:0009790: embryo development | 1.62E-02 |
| 58 | GO:0040008: regulation of growth | 1.77E-02 |
| 59 | GO:0006979: response to oxidative stress | 1.79E-02 |
| 60 | GO:0006470: protein dephosphorylation | 2.01E-02 |
| 61 | GO:0009617: response to bacterium | 2.07E-02 |
| 62 | GO:0009860: pollen tube growth | 2.63E-02 |
| 63 | GO:0007049: cell cycle | 2.70E-02 |
| 64 | GO:0046777: protein autophosphorylation | 3.05E-02 |
| 65 | GO:0044550: secondary metabolite biosynthetic process | 3.09E-02 |
| 66 | GO:0009734: auxin-activated signaling pathway | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 2 | GO:0004637: phosphoribosylamine-glycine ligase activity | 0.00E+00 |
| 3 | GO:0008320: protein transmembrane transporter activity | 7.17E-06 |
| 4 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.85E-05 |
| 5 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 8.18E-05 |
| 6 | GO:0004634: phosphopyruvate hydratase activity | 8.18E-05 |
| 7 | GO:0048531: beta-1,3-galactosyltransferase activity | 8.18E-05 |
| 8 | GO:0004298: threonine-type endopeptidase activity | 8.34E-05 |
| 9 | GO:0016531: copper chaperone activity | 1.42E-04 |
| 10 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 4.48E-04 |
| 11 | GO:0004332: fructose-bisphosphate aldolase activity | 4.48E-04 |
| 12 | GO:0004144: diacylglycerol O-acyltransferase activity | 5.36E-04 |
| 13 | GO:0004656: procollagen-proline 4-dioxygenase activity | 5.36E-04 |
| 14 | GO:0102391: decanoate--CoA ligase activity | 5.36E-04 |
| 15 | GO:0004467: long-chain fatty acid-CoA ligase activity | 6.27E-04 |
| 16 | GO:0016831: carboxy-lyase activity | 6.27E-04 |
| 17 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 6.27E-04 |
| 18 | GO:0015035: protein disulfide oxidoreductase activity | 1.08E-03 |
| 19 | GO:0016758: transferase activity, transferring hexosyl groups | 1.26E-03 |
| 20 | GO:0008378: galactosyltransferase activity | 1.36E-03 |
| 21 | GO:0008194: UDP-glycosyltransferase activity | 1.98E-03 |
| 22 | GO:0031418: L-ascorbic acid binding | 1.99E-03 |
| 23 | GO:0042802: identical protein binding | 2.24E-03 |
| 24 | GO:0035251: UDP-glucosyltransferase activity | 2.26E-03 |
| 25 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.26E-03 |
| 26 | GO:0000287: magnesium ion binding | 2.67E-03 |
| 27 | GO:0008233: peptidase activity | 3.30E-03 |
| 28 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 3.63E-03 |
| 29 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 5.04E-03 |
| 30 | GO:0004683: calmodulin-dependent protein kinase activity | 5.22E-03 |
| 31 | GO:0009055: electron carrier activity | 5.30E-03 |
| 32 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 6.60E-03 |
| 33 | GO:0051537: 2 iron, 2 sulfur cluster binding | 8.31E-03 |
| 34 | GO:0005198: structural molecule activity | 8.53E-03 |
| 35 | GO:0051287: NAD binding | 8.99E-03 |
| 36 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.17E-02 |
| 37 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.17E-02 |
| 38 | GO:0003779: actin binding | 1.22E-02 |
| 39 | GO:0005516: calmodulin binding | 1.32E-02 |
| 40 | GO:0016757: transferase activity, transferring glycosyl groups | 1.43E-02 |
| 41 | GO:0030170: pyridoxal phosphate binding | 1.57E-02 |
| 42 | GO:0005509: calcium ion binding | 1.64E-02 |
| 43 | GO:0005506: iron ion binding | 1.75E-02 |
| 44 | GO:0003729: mRNA binding | 2.65E-02 |
| 45 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.49E-02 |
| 46 | GO:0004722: protein serine/threonine phosphatase activity | 3.53E-02 |
| 47 | GO:0003924: GTPase activity | 3.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000015: phosphopyruvate hydratase complex | 8.18E-05 |
| 2 | GO:0030134: ER to Golgi transport vesicle | 8.18E-05 |
| 3 | GO:0005839: proteasome core complex | 8.34E-05 |
| 4 | GO:0005789: endoplasmic reticulum membrane | 1.48E-04 |
| 5 | GO:0005801: cis-Golgi network | 5.36E-04 |
| 6 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 6.27E-04 |
| 7 | GO:0045273: respiratory chain complex II | 7.22E-04 |
| 8 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 7.22E-04 |
| 9 | GO:0000502: proteasome complex | 7.51E-04 |
| 10 | GO:0019773: proteasome core complex, alpha-subunit complex | 8.20E-04 |
| 11 | GO:0005740: mitochondrial envelope | 1.13E-03 |
| 12 | GO:0010287: plastoglobule | 1.23E-03 |
| 13 | GO:0005623: cell | 1.33E-03 |
| 14 | GO:0005750: mitochondrial respiratory chain complex III | 1.60E-03 |
| 15 | GO:0005758: mitochondrial intermembrane space | 1.99E-03 |
| 16 | GO:0005741: mitochondrial outer membrane | 2.26E-03 |
| 17 | GO:0015935: small ribosomal subunit | 2.26E-03 |
| 18 | GO:0015629: actin cytoskeleton | 2.55E-03 |
| 19 | GO:0032580: Golgi cisterna membrane | 4.14E-03 |
| 20 | GO:0030529: intracellular ribonucleoprotein complex | 4.67E-03 |
| 21 | GO:0005819: spindle | 7.01E-03 |
| 22 | GO:0009506: plasmodesma | 7.07E-03 |
| 23 | GO:0005737: cytoplasm | 7.25E-03 |
| 24 | GO:0005783: endoplasmic reticulum | 9.31E-03 |
| 25 | GO:0005777: peroxisome | 1.01E-02 |
| 26 | GO:0005635: nuclear envelope | 1.02E-02 |
| 27 | GO:0005794: Golgi apparatus | 1.20E-02 |
| 28 | GO:0005829: cytosol | 1.33E-02 |
| 29 | GO:0009524: phragmoplast | 1.51E-02 |
| 30 | GO:0005622: intracellular | 1.56E-02 |
| 31 | GO:0000139: Golgi membrane | 2.41E-02 |
| 32 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.67E-02 |
| 33 | GO:0005874: microtubule | 2.84E-02 |
| 34 | GO:0016020: membrane | 2.91E-02 |
| 35 | GO:0005730: nucleolus | 3.01E-02 |
| 36 | GO:0043231: intracellular membrane-bounded organelle | 4.12E-02 |