Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G59870

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000505: regulation of energy homeostasis0.00E+00
2GO:0045014: negative regulation of transcription by glucose0.00E+00
3GO:0090627: plant epidermal cell differentiation0.00E+00
4GO:0051513: regulation of monopolar cell growth5.15E-07
5GO:0043266: regulation of potassium ion transport2.76E-05
6GO:2000021: regulation of ion homeostasis2.76E-05
7GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process2.76E-05
8GO:0000476: maturation of 4.5S rRNA2.76E-05
9GO:0000967: rRNA 5'-end processing2.76E-05
10GO:0034470: ncRNA processing7.01E-05
11GO:0080170: hydrogen peroxide transmembrane transport1.83E-04
12GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.83E-04
13GO:0010306: rhamnogalacturonan II biosynthetic process1.83E-04
14GO:0030104: water homeostasis2.48E-04
15GO:0015995: chlorophyll biosynthetic process2.56E-04
16GO:0009913: epidermal cell differentiation3.92E-04
17GO:0009772: photosynthetic electron transport in photosystem II5.49E-04
18GO:0006783: heme biosynthetic process8.07E-04
19GO:0048589: developmental growth8.07E-04
20GO:0009245: lipid A biosynthetic process8.07E-04
21GO:0010206: photosystem II repair8.07E-04
22GO:0010205: photoinhibition8.99E-04
23GO:0006782: protoporphyrinogen IX biosynthetic process9.92E-04
24GO:0009773: photosynthetic electron transport in photosystem I1.09E-03
25GO:0019684: photosynthesis, light reaction1.09E-03
26GO:0010152: pollen maturation1.19E-03
27GO:0010030: positive regulation of seed germination1.50E-03
28GO:0048511: rhythmic process1.97E-03
29GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.22E-03
30GO:0042742: defense response to bacterium2.32E-03
31GO:0048443: stamen development2.35E-03
32GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.48E-03
33GO:0034220: ion transmembrane transport2.61E-03
34GO:0042631: cellular response to water deprivation2.61E-03
35GO:0042335: cuticle development2.61E-03
36GO:0048868: pollen tube development2.74E-03
37GO:0042752: regulation of circadian rhythm2.88E-03
38GO:0048825: cotyledon development3.02E-03
39GO:0015979: photosynthesis3.12E-03
40GO:0010193: response to ozone3.16E-03
41GO:0000302: response to reactive oxygen species3.16E-03
42GO:0045454: cell redox homeostasis3.27E-03
43GO:0009828: plant-type cell wall loosening3.60E-03
44GO:0009627: systemic acquired resistance4.38E-03
45GO:0000160: phosphorelay signal transduction system5.04E-03
46GO:0034599: cellular response to oxidative stress5.91E-03
47GO:0030001: metal ion transport6.27E-03
48GO:0009735: response to cytokinin6.51E-03
49GO:0009664: plant-type cell wall organization7.99E-03
50GO:0042538: hyperosmotic salinity response7.99E-03
51GO:0009736: cytokinin-activated signaling pathway8.40E-03
52GO:0010224: response to UV-B8.60E-03
53GO:0009845: seed germination1.33E-02
54GO:0042744: hydrogen peroxide catabolic process1.38E-02
55GO:0006633: fatty acid biosynthetic process1.48E-02
56GO:0009826: unidimensional cell growth2.10E-02
57GO:0009860: pollen tube growth2.27E-02
58GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.58E-02
59GO:0046777: protein autophosphorylation2.64E-02
60GO:0009737: response to abscisic acid3.09E-02
61GO:0032259: methylation3.22E-02
62GO:0016042: lipid catabolic process3.25E-02
63GO:0008152: metabolic process3.56E-02
64GO:0009416: response to light stimulus4.99E-02
RankGO TermAdjusted P value
1GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
2GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
3GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity2.76E-05
4GO:0004853: uroporphyrinogen decarboxylase activity2.76E-05
5GO:0010011: auxin binding2.48E-04
6GO:0004130: cytochrome-c peroxidase activity3.92E-04
7GO:0031177: phosphopantetheine binding3.92E-04
8GO:0004017: adenylate kinase activity4.69E-04
9GO:0000035: acyl binding4.69E-04
10GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process6.32E-04
11GO:0008794: arsenate reductase (glutaredoxin) activity1.09E-03
12GO:0031072: heat shock protein binding1.29E-03
13GO:0008266: poly(U) RNA binding1.40E-03
14GO:0005515: protein binding1.71E-03
15GO:0005528: FK506 binding1.73E-03
16GO:0003756: protein disulfide isomerase activity2.35E-03
17GO:0000156: phosphorelay response regulator activity3.45E-03
18GO:0015250: water channel activity4.06E-03
19GO:0030145: manganese ion binding5.38E-03
20GO:0008289: lipid binding5.59E-03
21GO:0051537: 2 iron, 2 sulfur cluster binding7.20E-03
22GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.59E-03
23GO:0051082: unfolded protein binding1.07E-02
24GO:0015035: protein disulfide oxidoreductase activity1.10E-02
25GO:0005509: calcium ion binding1.33E-02
26GO:0004601: peroxidase activity2.16E-02
27GO:0016788: hydrolase activity, acting on ester bonds2.19E-02
28GO:0052689: carboxylic ester hydrolase activity2.70E-02
29GO:0009055: electron carrier activity3.49E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0009534: chloroplast thylakoid5.21E-15
3GO:0009535: chloroplast thylakoid membrane6.48E-15
4GO:0009507: chloroplast8.73E-12
5GO:0009543: chloroplast thylakoid lumen4.20E-08
6GO:0031977: thylakoid lumen2.63E-07
7GO:0030095: chloroplast photosystem II2.75E-07
8GO:0009579: thylakoid1.09E-05
9GO:0009941: chloroplast envelope1.91E-05
10GO:0043674: columella2.76E-05
11GO:0009570: chloroplast stroma5.06E-05
12GO:0030093: chloroplast photosystem I7.01E-05
13GO:0009533: chloroplast stromal thylakoid5.49E-04
14GO:0042807: central vacuole5.49E-04
15GO:0009538: photosystem I reaction center6.32E-04
16GO:0009508: plastid chromosome1.29E-03
17GO:0009705: plant-type vacuole membrane1.45E-03
18GO:0009654: photosystem II oxygen evolving complex1.85E-03
19GO:0009523: photosystem II3.02E-03
20GO:0019898: extrinsic component of membrane3.02E-03
21GO:0009295: nucleoid3.75E-03
22GO:0031969: chloroplast membrane2.51E-02
23GO:0016021: integral component of membrane4.09E-02
24GO:0005887: integral component of plasma membrane4.13E-02
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Gene type



Gene DE type