GO Enrichment Analysis of Co-expressed Genes with
AT3G59700
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 2 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 3 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 4 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 5 | GO:0000731: DNA synthesis involved in DNA repair | 0.00E+00 |
| 6 | GO:0034214: protein hexamerization | 3.12E-05 |
| 7 | GO:0048508: embryonic meristem development | 3.12E-05 |
| 8 | GO:0097054: L-glutamate biosynthetic process | 7.88E-05 |
| 9 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 7.88E-05 |
| 10 | GO:0009945: radial axis specification | 7.88E-05 |
| 11 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 1.37E-04 |
| 12 | GO:0051176: positive regulation of sulfur metabolic process | 1.37E-04 |
| 13 | GO:0006537: glutamate biosynthetic process | 2.04E-04 |
| 14 | GO:0010188: response to microbial phytotoxin | 2.76E-04 |
| 15 | GO:0009165: nucleotide biosynthetic process | 2.76E-04 |
| 16 | GO:0019676: ammonia assimilation cycle | 2.76E-04 |
| 17 | GO:0009697: salicylic acid biosynthetic process | 3.53E-04 |
| 18 | GO:0009247: glycolipid biosynthetic process | 3.53E-04 |
| 19 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 4.34E-04 |
| 20 | GO:0001731: formation of translation preinitiation complex | 4.34E-04 |
| 21 | GO:0043248: proteasome assembly | 4.34E-04 |
| 22 | GO:0070814: hydrogen sulfide biosynthetic process | 4.34E-04 |
| 23 | GO:0009942: longitudinal axis specification | 5.20E-04 |
| 24 | GO:0010310: regulation of hydrogen peroxide metabolic process | 5.20E-04 |
| 25 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 6.07E-04 |
| 26 | GO:0050790: regulation of catalytic activity | 6.07E-04 |
| 27 | GO:0019375: galactolipid biosynthetic process | 6.99E-04 |
| 28 | GO:0016559: peroxisome fission | 6.99E-04 |
| 29 | GO:0009819: drought recovery | 6.99E-04 |
| 30 | GO:0009642: response to light intensity | 6.99E-04 |
| 31 | GO:0006261: DNA-dependent DNA replication | 7.94E-04 |
| 32 | GO:0000103: sulfate assimilation | 1.10E-03 |
| 33 | GO:0019538: protein metabolic process | 1.10E-03 |
| 34 | GO:0045037: protein import into chloroplast stroma | 1.31E-03 |
| 35 | GO:0000266: mitochondrial fission | 1.31E-03 |
| 36 | GO:0006446: regulation of translational initiation | 1.55E-03 |
| 37 | GO:0006406: mRNA export from nucleus | 1.92E-03 |
| 38 | GO:0009116: nucleoside metabolic process | 1.92E-03 |
| 39 | GO:0006470: protein dephosphorylation | 1.93E-03 |
| 40 | GO:0006366: transcription from RNA polymerase II promoter | 2.19E-03 |
| 41 | GO:0016226: iron-sulfur cluster assembly | 2.32E-03 |
| 42 | GO:0009651: response to salt stress | 2.84E-03 |
| 43 | GO:0010501: RNA secondary structure unwinding | 2.90E-03 |
| 44 | GO:0045489: pectin biosynthetic process | 3.05E-03 |
| 45 | GO:0000302: response to reactive oxygen species | 3.51E-03 |
| 46 | GO:0051607: defense response to virus | 4.34E-03 |
| 47 | GO:0005975: carbohydrate metabolic process | 4.81E-03 |
| 48 | GO:0000724: double-strand break repair via homologous recombination | 6.18E-03 |
| 49 | GO:0051707: response to other organism | 7.60E-03 |
| 50 | GO:0006260: DNA replication | 8.68E-03 |
| 51 | GO:0051603: proteolysis involved in cellular protein catabolic process | 9.59E-03 |
| 52 | GO:0006417: regulation of translation | 1.01E-02 |
| 53 | GO:0009414: response to water deprivation | 1.65E-02 |
| 54 | GO:0016036: cellular response to phosphate starvation | 1.68E-02 |
| 55 | GO:0006413: translational initiation | 1.68E-02 |
| 56 | GO:0071555: cell wall organization | 1.69E-02 |
| 57 | GO:0009409: response to cold | 2.29E-02 |
| 58 | GO:0006970: response to osmotic stress | 2.54E-02 |
| 59 | GO:0009408: response to heat | 3.71E-02 |
| 60 | GO:0006397: mRNA processing | 3.82E-02 |
| 61 | GO:0008152: metabolic process | 3.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015930: glutamate synthase activity | 0.00E+00 |
| 2 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 3 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 4 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 5 | GO:0070008: serine-type exopeptidase activity | 3.12E-05 |
| 6 | GO:0046481: digalactosyldiacylglycerol synthase activity | 3.12E-05 |
| 7 | GO:0016041: glutamate synthase (ferredoxin) activity | 3.12E-05 |
| 8 | GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 7.88E-05 |
| 9 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 1.37E-04 |
| 10 | GO:0052692: raffinose alpha-galactosidase activity | 1.37E-04 |
| 11 | GO:0004557: alpha-galactosidase activity | 1.37E-04 |
| 12 | GO:0035250: UDP-galactosyltransferase activity | 2.04E-04 |
| 13 | GO:0031176: endo-1,4-beta-xylanase activity | 2.04E-04 |
| 14 | GO:0004749: ribose phosphate diphosphokinase activity | 2.04E-04 |
| 15 | GO:0004416: hydroxyacylglutathione hydrolase activity | 2.04E-04 |
| 16 | GO:0051538: 3 iron, 4 sulfur cluster binding | 3.53E-04 |
| 17 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 3.53E-04 |
| 18 | GO:0035252: UDP-xylosyltransferase activity | 4.34E-04 |
| 19 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 6.07E-04 |
| 20 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 6.07E-04 |
| 21 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 6.99E-04 |
| 22 | GO:0008026: ATP-dependent helicase activity | 1.06E-03 |
| 23 | GO:0008047: enzyme activator activity | 1.10E-03 |
| 24 | GO:0003887: DNA-directed DNA polymerase activity | 1.79E-03 |
| 25 | GO:0008194: UDP-glycosyltransferase activity | 1.89E-03 |
| 26 | GO:0035251: UDP-glucosyltransferase activity | 2.19E-03 |
| 27 | GO:0003727: single-stranded RNA binding | 2.61E-03 |
| 28 | GO:0004197: cysteine-type endopeptidase activity | 3.68E-03 |
| 29 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 4.17E-03 |
| 30 | GO:0004722: protein serine/threonine phosphatase activity | 4.19E-03 |
| 31 | GO:0003729: mRNA binding | 4.69E-03 |
| 32 | GO:0008375: acetylglucosaminyltransferase activity | 4.87E-03 |
| 33 | GO:0004004: ATP-dependent RNA helicase activity | 5.05E-03 |
| 34 | GO:0008236: serine-type peptidase activity | 5.23E-03 |
| 35 | GO:0005524: ATP binding | 9.54E-03 |
| 36 | GO:0008234: cysteine-type peptidase activity | 1.01E-02 |
| 37 | GO:0003723: RNA binding | 1.02E-02 |
| 38 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.10E-02 |
| 39 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.13E-02 |
| 40 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.13E-02 |
| 41 | GO:0016874: ligase activity | 1.15E-02 |
| 42 | GO:0004386: helicase activity | 1.27E-02 |
| 43 | GO:0016757: transferase activity, transferring glycosyl groups | 1.34E-02 |
| 44 | GO:0016758: transferase activity, transferring hexosyl groups | 1.38E-02 |
| 45 | GO:0004252: serine-type endopeptidase activity | 1.51E-02 |
| 46 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.54E-02 |
| 47 | GO:0008565: protein transporter activity | 1.60E-02 |
| 48 | GO:0003743: translation initiation factor activity | 1.97E-02 |
| 49 | GO:0000287: magnesium ion binding | 2.38E-02 |
| 50 | GO:0042803: protein homodimerization activity | 3.30E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0043625: delta DNA polymerase complex | 3.12E-05 |
| 3 | GO:0005782: peroxisomal matrix | 1.37E-04 |
| 4 | GO:0016282: eukaryotic 43S preinitiation complex | 4.34E-04 |
| 5 | GO:0033290: eukaryotic 48S preinitiation complex | 5.20E-04 |
| 6 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.20E-03 |
| 7 | GO:0005764: lysosome | 1.55E-03 |
| 8 | GO:0043234: protein complex | 1.79E-03 |
| 9 | GO:0005741: mitochondrial outer membrane | 2.19E-03 |
| 10 | GO:0005778: peroxisomal membrane | 4.17E-03 |
| 11 | GO:0009707: chloroplast outer membrane | 5.42E-03 |
| 12 | GO:0000502: proteasome complex | 9.36E-03 |
| 13 | GO:0005777: peroxisome | 9.56E-03 |
| 14 | GO:0005635: nuclear envelope | 9.82E-03 |
| 15 | GO:0009706: chloroplast inner membrane | 1.20E-02 |
| 16 | GO:0005802: trans-Golgi network | 1.34E-02 |
| 17 | GO:0005654: nucleoplasm | 1.38E-02 |
| 18 | GO:0005623: cell | 1.43E-02 |
| 19 | GO:0005768: endosome | 1.52E-02 |
| 20 | GO:0005615: extracellular space | 1.91E-02 |
| 21 | GO:0009536: plastid | 2.08E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 2.16E-02 |
| 23 | GO:0005773: vacuole | 2.35E-02 |
| 24 | GO:0009507: chloroplast | 2.52E-02 |
| 25 | GO:0009570: chloroplast stroma | 3.06E-02 |
| 26 | GO:0043231: intracellular membrane-bounded organelle | 3.97E-02 |