Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G58100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090391: granum assembly1.93E-05
2GO:0006655: phosphatidylglycerol biosynthetic process7.20E-05
3GO:0006412: translation7.68E-05
4GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)8.84E-05
5GO:0010196: nonphotochemical quenching1.06E-04
6GO:0008610: lipid biosynthetic process1.24E-04
7GO:0032544: plastid translation1.44E-04
8GO:0009073: aromatic amino acid family biosynthetic process2.27E-04
9GO:0016024: CDP-diacylglycerol biosynthetic process2.49E-04
10GO:0009695: jasmonic acid biosynthetic process3.93E-04
11GO:0031408: oxylipin biosynthetic process4.18E-04
12GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.69E-04
13GO:0080022: primary root development5.49E-04
14GO:0008654: phospholipid biosynthetic process6.32E-04
15GO:0009828: plant-type cell wall loosening7.48E-04
16GO:0010027: thylakoid membrane organization8.38E-04
17GO:0009664: plant-type cell wall organization1.58E-03
18GO:0006633: fatty acid biosynthetic process2.84E-03
19GO:0009826: unidimensional cell growth3.96E-03
20GO:0042254: ribosome biogenesis4.12E-03
21GO:0006457: protein folding1.10E-02
22GO:0009409: response to cold1.87E-02
RankGO TermAdjusted P value
1GO:0019843: rRNA binding7.32E-09
2GO:0004321: fatty-acyl-CoA synthase activity3.73E-06
3GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity1.03E-05
4GO:0003735: structural constituent of ribosome1.18E-05
5GO:0016836: hydro-lyase activity4.28E-05
6GO:0004605: phosphatidate cytidylyltransferase activity7.20E-05
7GO:0004620: phospholipase activity1.06E-04
8GO:0016207: 4-coumarate-CoA ligase activity1.63E-04
9GO:0008266: poly(U) RNA binding2.95E-04
10GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.50E-03
11GO:0016874: ligase activity2.01E-03
12GO:0000287: magnesium ion binding4.01E-03
13GO:0016787: hydrolase activity2.60E-02
RankGO TermAdjusted P value
1GO:0000312: plastid small ribosomal subunit1.63E-06
2GO:0009941: chloroplast envelope2.77E-06
3GO:0009515: granal stacked thylakoid3.73E-06
4GO:0009547: plastid ribosome3.73E-06
5GO:0009507: chloroplast2.25E-05
6GO:0009534: chloroplast thylakoid4.18E-05
7GO:0009570: chloroplast stroma1.16E-04
8GO:0022627: cytosolic small ribosomal subunit1.76E-04
9GO:0000311: plastid large ribosomal subunit2.49E-04
10GO:0009535: chloroplast thylakoid membrane2.81E-04
11GO:0015935: small ribosomal subunit4.18E-04
12GO:0016020: membrane5.69E-04
13GO:0005840: ribosome1.36E-03
14GO:0009543: chloroplast thylakoid lumen2.43E-03
15GO:0031969: chloroplast membrane4.71E-03
16GO:0005618: cell wall5.02E-03
17GO:0022626: cytosolic ribosome8.89E-03
18GO:0005777: peroxisome1.01E-02
19GO:0009579: thylakoid1.04E-02
20GO:0005802: trans-Golgi network1.28E-02
21GO:0005768: endosome1.40E-02
22GO:0009536: plastid1.75E-02
23GO:0000139: Golgi membrane1.87E-02
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Gene type



Gene DE type