Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G57240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
2GO:0009992: cellular water homeostasis0.00E+00
3GO:0019428: allantoin biosynthetic process0.00E+00
4GO:0032324: molybdopterin cofactor biosynthetic process0.00E+00
5GO:0051553: flavone biosynthetic process0.00E+00
6GO:0032499: detection of peptidoglycan0.00E+00
7GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
8GO:0072660: maintenance of protein location in plasma membrane0.00E+00
9GO:0042742: defense response to bacterium2.85E-13
10GO:0006468: protein phosphorylation1.11E-10
11GO:0006952: defense response1.05E-07
12GO:0009627: systemic acquired resistance1.51E-06
13GO:0080185: effector dependent induction by symbiont of host immune response2.56E-06
14GO:0031349: positive regulation of defense response2.56E-06
15GO:0009751: response to salicylic acid2.62E-06
16GO:0050832: defense response to fungus1.82E-05
17GO:0060548: negative regulation of cell death3.85E-05
18GO:0009817: defense response to fungus, incompatible interaction4.87E-05
19GO:0010942: positive regulation of cell death9.03E-05
20GO:0006777: Mo-molybdopterin cofactor biosynthetic process9.03E-05
21GO:0031348: negative regulation of defense response9.95E-05
22GO:0007166: cell surface receptor signaling pathway1.73E-04
23GO:0009617: response to bacterium1.88E-04
24GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline2.09E-04
25GO:0030162: regulation of proteolysis2.09E-04
26GO:0001560: regulation of cell growth by extracellular stimulus2.34E-04
27GO:0097502: mannosylation2.34E-04
28GO:0019628: urate catabolic process2.34E-04
29GO:0051245: negative regulation of cellular defense response2.34E-04
30GO:0046938: phytochelatin biosynthetic process2.34E-04
31GO:0043687: post-translational protein modification2.34E-04
32GO:0006643: membrane lipid metabolic process2.34E-04
33GO:0055081: anion homeostasis2.34E-04
34GO:0002143: tRNA wobble position uridine thiolation2.34E-04
35GO:0006680: glucosylceramide catabolic process2.34E-04
36GO:0032491: detection of molecule of fungal origin2.34E-04
37GO:0060862: negative regulation of floral organ abscission2.34E-04
38GO:0006144: purine nucleobase metabolic process2.34E-04
39GO:0010266: response to vitamin B12.34E-04
40GO:2000031: regulation of salicylic acid mediated signaling pathway2.59E-04
41GO:0009620: response to fungus3.15E-04
42GO:0007165: signal transduction3.63E-04
43GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway3.73E-04
44GO:0009816: defense response to bacterium, incompatible interaction4.26E-04
45GO:0043069: negative regulation of programmed cell death4.36E-04
46GO:0010618: aerenchyma formation5.20E-04
47GO:0006695: cholesterol biosynthetic process5.20E-04
48GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex5.20E-04
49GO:0008535: respiratory chain complex IV assembly5.20E-04
50GO:0002221: pattern recognition receptor signaling pathway5.20E-04
51GO:0070588: calcium ion transmembrane transport8.23E-04
52GO:0055074: calcium ion homeostasis8.44E-04
53GO:0042344: indole glucosinolate catabolic process8.44E-04
54GO:1900140: regulation of seedling development8.44E-04
55GO:0072661: protein targeting to plasma membrane8.44E-04
56GO:0015783: GDP-fucose transport8.44E-04
57GO:0006517: protein deglycosylation8.44E-04
58GO:0009863: salicylic acid mediated signaling pathway1.01E-03
59GO:0009311: oligosaccharide metabolic process1.20E-03
60GO:0002239: response to oomycetes1.20E-03
61GO:0010148: transpiration1.20E-03
62GO:0006516: glycoprotein catabolic process1.20E-03
63GO:0015700: arsenite transport1.20E-03
64GO:0006612: protein targeting to membrane1.20E-03
65GO:0071323: cellular response to chitin1.20E-03
66GO:0051289: protein homotetramerization1.20E-03
67GO:0006515: misfolded or incompletely synthesized protein catabolic process1.20E-03
68GO:0000187: activation of MAPK activity1.20E-03
69GO:0009814: defense response, incompatible interaction1.33E-03
70GO:2000022: regulation of jasmonic acid mediated signaling pathway1.33E-03
71GO:0045088: regulation of innate immune response1.61E-03
72GO:0010363: regulation of plant-type hypersensitive response1.61E-03
73GO:0071219: cellular response to molecule of bacterial origin1.61E-03
74GO:0010188: response to microbial phytotoxin1.61E-03
75GO:0080142: regulation of salicylic acid biosynthetic process1.61E-03
76GO:0009626: plant-type hypersensitive response2.00E-03
77GO:0000304: response to singlet oxygen2.05E-03
78GO:0030041: actin filament polymerization2.05E-03
79GO:0018279: protein N-linked glycosylation via asparagine2.05E-03
80GO:0046283: anthocyanin-containing compound metabolic process2.05E-03
81GO:0031365: N-terminal protein amino acid modification2.05E-03
82GO:0061025: membrane fusion2.12E-03
83GO:0006623: protein targeting to vacuole2.27E-03
84GO:0010200: response to chitin2.39E-03
85GO:0060918: auxin transport2.52E-03
86GO:0047484: regulation of response to osmotic stress2.52E-03
87GO:0009759: indole glucosinolate biosynthetic process2.52E-03
88GO:0030163: protein catabolic process2.77E-03
89GO:0010310: regulation of hydrogen peroxide metabolic process3.03E-03
90GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.03E-03
91GO:0000911: cytokinesis by cell plate formation3.03E-03
92GO:0009612: response to mechanical stimulus3.03E-03
93GO:0006694: steroid biosynthetic process3.03E-03
94GO:0009861: jasmonic acid and ethylene-dependent systemic resistance3.03E-03
95GO:0016126: sterol biosynthetic process3.51E-03
96GO:0046470: phosphatidylcholine metabolic process3.58E-03
97GO:0071446: cellular response to salicylic acid stimulus3.58E-03
98GO:1900056: negative regulation of leaf senescence3.58E-03
99GO:0010044: response to aluminum ion3.58E-03
100GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.58E-03
101GO:0010161: red light signaling pathway3.58E-03
102GO:0009787: regulation of abscisic acid-activated signaling pathway4.15E-03
103GO:0006102: isocitrate metabolic process4.15E-03
104GO:0008219: cell death4.57E-03
105GO:0006002: fructose 6-phosphate metabolic process4.74E-03
106GO:0010120: camalexin biosynthetic process4.74E-03
107GO:0010204: defense response signaling pathway, resistance gene-independent4.74E-03
108GO:0009813: flavonoid biosynthetic process4.80E-03
109GO:0010119: regulation of stomatal movement5.28E-03
110GO:0046685: response to arsenic-containing substance5.37E-03
111GO:0010112: regulation of systemic acquired resistance5.37E-03
112GO:0015780: nucleotide-sugar transport5.37E-03
113GO:0006470: protein dephosphorylation5.55E-03
114GO:0045087: innate immune response5.79E-03
115GO:0010215: cellulose microfibril organization6.71E-03
116GO:0006032: chitin catabolic process6.71E-03
117GO:0006887: exocytosis6.88E-03
118GO:0052544: defense response by callose deposition in cell wall7.43E-03
119GO:0019684: photosynthesis, light reaction7.43E-03
120GO:0008643: carbohydrate transport8.08E-03
121GO:0012501: programmed cell death8.17E-03
122GO:0006508: proteolysis8.27E-03
123GO:0031347: regulation of defense response9.04E-03
124GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process9.04E-03
125GO:0000165: MAPK cascade9.04E-03
126GO:0002237: response to molecule of bacterial origin9.72E-03
127GO:0016192: vesicle-mediated transport1.14E-02
128GO:0080147: root hair cell development1.22E-02
129GO:0006487: protein N-linked glycosylation1.22E-02
130GO:0048278: vesicle docking1.40E-02
131GO:0016998: cell wall macromolecule catabolic process1.40E-02
132GO:0009742: brassinosteroid mediated signaling pathway1.52E-02
133GO:0009306: protein secretion1.69E-02
134GO:0010051: xylem and phloem pattern formation1.89E-02
135GO:0010197: polar nucleus fusion1.99E-02
136GO:0010183: pollen tube guidance2.20E-02
137GO:0002229: defense response to oomycetes2.31E-02
138GO:0010193: response to ozone2.31E-02
139GO:0000302: response to reactive oxygen species2.31E-02
140GO:0016132: brassinosteroid biosynthetic process2.31E-02
141GO:0010150: leaf senescence2.49E-02
142GO:0006904: vesicle docking involved in exocytosis2.77E-02
143GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.79E-02
144GO:0001666: response to hypoxia3.01E-02
145GO:0009615: response to virus3.01E-02
146GO:0009607: response to biotic stimulus3.13E-02
147GO:0006906: vesicle fusion3.25E-02
148GO:0006888: ER to Golgi vesicle-mediated transport3.38E-02
149GO:0016049: cell growth3.50E-02
150GO:0009826: unidimensional cell growth3.71E-02
151GO:0006499: N-terminal protein myristoylation3.89E-02
152GO:0009407: toxin catabolic process3.89E-02
153GO:0015031: protein transport3.99E-02
154GO:0009631: cold acclimation4.03E-02
155GO:0009867: jasmonic acid mediated signaling pathway4.30E-02
156GO:0006099: tricarboxylic acid cycle4.43E-02
157GO:0006839: mitochondrial transport4.71E-02
158GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.91E-02
159GO:0042542: response to hydrogen peroxide5.00E-02
RankGO TermAdjusted P value
1GO:0033759: flavone synthase activity0.00E+00
2GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
3GO:1901149: salicylic acid binding0.00E+00
4GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity0.00E+00
5GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
6GO:0000033: alpha-1,3-mannosyltransferase activity0.00E+00
7GO:0009918: sterol delta7 reductase activity0.00E+00
8GO:0061598: molybdopterin adenylyltransferase activity0.00E+00
9GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
10GO:0000247: C-8 sterol isomerase activity0.00E+00
11GO:0047750: cholestenol delta-isomerase activity0.00E+00
12GO:2001080: chitosan binding0.00E+00
13GO:0061599: molybdopterin molybdotransferase activity0.00E+00
14GO:0033971: hydroxyisourate hydrolase activity0.00E+00
15GO:0047598: 7-dehydrocholesterol reductase activity0.00E+00
16GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity0.00E+00
17GO:0016301: kinase activity1.17E-10
18GO:0004674: protein serine/threonine kinase activity6.69E-09
19GO:0005524: ATP binding2.42E-08
20GO:0004576: oligosaccharyl transferase activity3.85E-05
21GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity6.16E-05
22GO:0004656: procollagen-proline 4-dioxygenase activity1.24E-04
23GO:0004708: MAP kinase kinase activity2.09E-04
24GO:0004714: transmembrane receptor protein tyrosine kinase activity2.09E-04
25GO:0015085: calcium ion transmembrane transporter activity2.34E-04
26GO:0046870: cadmium ion binding2.34E-04
27GO:0015446: ATPase-coupled arsenite transmembrane transporter activity2.34E-04
28GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity2.34E-04
29GO:0004348: glucosylceramidase activity2.34E-04
30GO:0071992: phytochelatin transmembrane transporter activity2.34E-04
31GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.40E-04
32GO:0030247: polysaccharide binding4.90E-04
33GO:0004672: protein kinase activity5.01E-04
34GO:0005509: calcium ion binding6.03E-04
35GO:0005388: calcium-transporting ATPase activity6.54E-04
36GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors7.52E-04
37GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.62E-04
38GO:0004190: aspartic-type endopeptidase activity8.23E-04
39GO:0008265: Mo-molybdopterin cofactor sulfurase activity8.44E-04
40GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity8.44E-04
41GO:0005457: GDP-fucose transmembrane transporter activity8.44E-04
42GO:0005515: protein binding8.45E-04
43GO:0031418: L-ascorbic acid binding1.01E-03
44GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.20E-03
45GO:0004449: isocitrate dehydrogenase (NAD+) activity1.20E-03
46GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.20E-03
47GO:0004792: thiosulfate sulfurtransferase activity1.20E-03
48GO:0033612: receptor serine/threonine kinase binding1.21E-03
49GO:0019199: transmembrane receptor protein kinase activity1.61E-03
50GO:0043495: protein anchor1.61E-03
51GO:0031625: ubiquitin protein ligase binding1.70E-03
52GO:0045431: flavonol synthase activity2.05E-03
53GO:0008641: small protein activating enzyme activity2.05E-03
54GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.05E-03
55GO:0030151: molybdenum ion binding2.05E-03
56GO:0004012: phospholipid-translocating ATPase activity3.03E-03
57GO:0004722: protein serine/threonine phosphatase activity3.43E-03
58GO:0008235: metalloexopeptidase activity3.58E-03
59GO:0003872: 6-phosphofructokinase activity3.58E-03
60GO:0004806: triglyceride lipase activity4.13E-03
61GO:0004630: phospholipase D activity4.74E-03
62GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity4.74E-03
63GO:0005516: calmodulin binding5.15E-03
64GO:0004713: protein tyrosine kinase activity6.71E-03
65GO:0004568: chitinase activity6.71E-03
66GO:0004177: aminopeptidase activity7.43E-03
67GO:0005484: SNAP receptor activity7.46E-03
68GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.93E-03
69GO:0043531: ADP binding9.17E-03
70GO:0046872: metal ion binding1.00E-02
71GO:0016298: lipase activity1.04E-02
72GO:0008061: chitin binding1.05E-02
73GO:0004707: MAP kinase activity1.40E-02
74GO:0008514: organic anion transmembrane transporter activity1.69E-02
75GO:0030276: clathrin binding1.99E-02
76GO:0004721: phosphoprotein phosphatase activity3.38E-02
77GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.63E-02
78GO:0000149: SNARE binding4.57E-02
79GO:0004364: glutathione transferase activity5.00E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane8.19E-15
2GO:0016021: integral component of membrane2.38E-12
3GO:0030665: clathrin-coated vesicle membrane1.17E-05
4GO:0005789: endoplasmic reticulum membrane3.07E-05
5GO:0008250: oligosaccharyltransferase complex6.16E-05
6GO:0005911: cell-cell junction2.34E-04
7GO:0031234: extrinsic component of cytoplasmic side of plasma membrane2.34E-04
8GO:0017119: Golgi transport complex4.36E-04
9GO:0070062: extracellular exosome1.20E-03
10GO:0005783: endoplasmic reticulum1.30E-03
11GO:0005774: vacuolar membrane1.38E-03
12GO:0005794: Golgi apparatus1.86E-03
13GO:0005945: 6-phosphofructokinase complex2.05E-03
14GO:0009504: cell plate2.27E-03
15GO:0009506: plasmodesma3.63E-03
16GO:0009505: plant-type cell wall3.95E-03
17GO:0030131: clathrin adaptor complex4.15E-03
18GO:0019005: SCF ubiquitin ligase complex4.57E-03
19GO:0005802: trans-Golgi network5.75E-03
20GO:0005887: integral component of plasma membrane6.52E-03
21GO:0031902: late endosome membrane6.88E-03
22GO:0030176: integral component of endoplasmic reticulum membrane1.05E-02
23GO:0031225: anchored component of membrane1.91E-02
24GO:0005737: cytoplasm2.40E-02
25GO:0005768: endosome2.41E-02
26GO:0000145: exocyst2.42E-02
27GO:0071944: cell periphery2.54E-02
28GO:0005788: endoplasmic reticulum lumen3.13E-02
29GO:0000151: ubiquitin ligase complex3.63E-02
30GO:0000139: Golgi membrane4.36E-02
31GO:0031201: SNARE complex4.85E-02
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Gene type



Gene DE type