Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G56800

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
3GO:1900367: positive regulation of defense response to insect0.00E+00
4GO:0042964: thioredoxin reduction1.48E-05
5GO:1901183: positive regulation of camalexin biosynthetic process1.48E-05
6GO:2000072: regulation of defense response to fungus, incompatible interaction3.88E-05
7GO:0080151: positive regulation of salicylic acid mediated signaling pathway3.88E-05
8GO:0010618: aerenchyma formation3.88E-05
9GO:0072661: protein targeting to plasma membrane6.95E-05
10GO:0055074: calcium ion homeostasis6.95E-05
11GO:0010359: regulation of anion channel activity6.95E-05
12GO:0080142: regulation of salicylic acid biosynthetic process1.45E-04
13GO:0010225: response to UV-C1.88E-04
14GO:0046283: anthocyanin-containing compound metabolic process1.88E-04
15GO:0010942: positive regulation of cell death2.34E-04
16GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.34E-04
17GO:0010310: regulation of hydrogen peroxide metabolic process2.82E-04
18GO:0009626: plant-type hypersensitive response3.65E-04
19GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.84E-04
20GO:0006605: protein targeting3.84E-04
21GO:0018105: peptidyl-serine phosphorylation4.24E-04
22GO:2000031: regulation of salicylic acid mediated signaling pathway4.37E-04
23GO:0009699: phenylpropanoid biosynthetic process4.37E-04
24GO:0019430: removal of superoxide radicals4.37E-04
25GO:0010204: defense response signaling pathway, resistance gene-independent4.37E-04
26GO:1900426: positive regulation of defense response to bacterium5.49E-04
27GO:0030042: actin filament depolymerization5.49E-04
28GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.49E-04
29GO:0071365: cellular response to auxin stimulus7.29E-04
30GO:0002213: defense response to insect7.29E-04
31GO:0010105: negative regulation of ethylene-activated signaling pathway7.29E-04
32GO:0009617: response to bacterium8.26E-04
33GO:0010167: response to nitrate9.19E-04
34GO:0046688: response to copper ion9.19E-04
35GO:0080147: root hair cell development1.05E-03
36GO:0006825: copper ion transport1.12E-03
37GO:0015031: protein transport1.18E-03
38GO:0031348: negative regulation of defense response1.26E-03
39GO:2000022: regulation of jasmonic acid mediated signaling pathway1.26E-03
40GO:0009625: response to insect1.34E-03
41GO:0016192: vesicle-mediated transport1.36E-03
42GO:0046777: protein autophosphorylation1.38E-03
43GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.49E-03
44GO:0046686: response to cadmium ion1.52E-03
45GO:0006886: intracellular protein transport1.58E-03
46GO:0007264: small GTPase mediated signal transduction1.98E-03
47GO:0006468: protein phosphorylation2.37E-03
48GO:0001666: response to hypoxia2.42E-03
49GO:0009816: defense response to bacterium, incompatible interaction2.52E-03
50GO:0009627: systemic acquired resistance2.61E-03
51GO:0006906: vesicle fusion2.61E-03
52GO:0016049: cell growth2.80E-03
53GO:0006499: N-terminal protein myristoylation3.09E-03
54GO:0010119: regulation of stomatal movement3.20E-03
55GO:0045087: innate immune response3.40E-03
56GO:0035556: intracellular signal transduction3.49E-03
57GO:0006099: tricarboxylic acid cycle3.50E-03
58GO:0006887: exocytosis3.82E-03
59GO:0051707: response to other organism4.04E-03
60GO:0009846: pollen germination4.71E-03
61GO:0009909: regulation of flower development5.31E-03
62GO:0048316: seed development5.68E-03
63GO:0040008: regulation of growth8.93E-03
64GO:0010150: leaf senescence9.23E-03
65GO:0045454: cell redox homeostasis1.66E-02
66GO:0016042: lipid catabolic process1.89E-02
67GO:0009751: response to salicylic acid1.91E-02
68GO:0006629: lipid metabolic process1.93E-02
69GO:0008152: metabolic process2.07E-02
70GO:0009873: ethylene-activated signaling pathway2.31E-02
71GO:0009734: auxin-activated signaling pathway2.46E-02
72GO:0009738: abscisic acid-activated signaling pathway2.83E-02
73GO:0006457: protein folding3.49E-02
74GO:0006511: ubiquitin-dependent protein catabolic process3.61E-02
75GO:0042742: defense response to bacterium4.79E-02
76GO:0006979: response to oxidative stress4.82E-02
RankGO TermAdjusted P value
1GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
2GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
3GO:0048037: cofactor binding1.48E-05
4GO:0004776: succinate-CoA ligase (GDP-forming) activity3.88E-05
5GO:0004775: succinate-CoA ligase (ADP-forming) activity3.88E-05
6GO:0005093: Rab GDP-dissociation inhibitor activity6.95E-05
7GO:0016531: copper chaperone activity6.95E-05
8GO:0009931: calcium-dependent protein serine/threonine kinase activity1.07E-04
9GO:0004683: calmodulin-dependent protein kinase activity1.13E-04
10GO:0004029: aldehyde dehydrogenase (NAD) activity2.34E-04
11GO:0004656: procollagen-proline 4-dioxygenase activity2.82E-04
12GO:0008320: protein transmembrane transporter activity3.32E-04
13GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.49E-04
14GO:0005509: calcium ion binding7.96E-04
15GO:0004791: thioredoxin-disulfide reductase activity1.73E-03
16GO:0004806: triglyceride lipase activity2.70E-03
17GO:0005096: GTPase activator activity3.00E-03
18GO:0004222: metalloendopeptidase activity3.09E-03
19GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.40E-03
20GO:0000149: SNARE binding3.61E-03
21GO:0004712: protein serine/threonine/tyrosine kinase activity3.61E-03
22GO:0005484: SNAP receptor activity4.04E-03
23GO:0005516: calmodulin binding4.96E-03
24GO:0016298: lipase activity5.07E-03
25GO:0080043: quercetin 3-O-glucosyltransferase activity5.93E-03
26GO:0080044: quercetin 7-O-glucosyltransferase activity5.93E-03
27GO:0003779: actin binding6.18E-03
28GO:0051082: unfolded protein binding6.31E-03
29GO:0004674: protein serine/threonine kinase activity6.48E-03
30GO:0016758: transferase activity, transferring hexosyl groups7.24E-03
31GO:0016301: kinase activity7.68E-03
32GO:0004672: protein kinase activity9.79E-03
33GO:0008194: UDP-glycosyltransferase activity9.99E-03
34GO:0000166: nucleotide binding2.90E-02
35GO:0016740: transferase activity3.34E-02
36GO:0030246: carbohydrate binding3.58E-02
37GO:0005507: copper ion binding3.73E-02
38GO:0005515: protein binding4.70E-02
RankGO TermAdjusted P value
1GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane3.32E-04
2GO:0005829: cytosol3.64E-04
3GO:0031901: early endosome membrane4.93E-04
4GO:0005623: cell5.26E-04
5GO:0005622: intracellular7.48E-04
6GO:0031012: extracellular matrix7.91E-04
7GO:0005750: mitochondrial respiratory chain complex III8.55E-04
8GO:0005758: mitochondrial intermembrane space1.05E-03
9GO:0015629: actin cytoskeleton1.34E-03
10GO:0005789: endoplasmic reticulum membrane1.48E-03
11GO:0009504: cell plate1.81E-03
12GO:0032580: Golgi cisterna membrane2.15E-03
13GO:0005788: endoplasmic reticulum lumen2.52E-03
14GO:0019005: SCF ubiquitin ligase complex2.90E-03
15GO:0031201: SNARE complex3.82E-03
16GO:0005768: endosome5.99E-03
17GO:0005759: mitochondrial matrix8.64E-03
18GO:0005886: plasma membrane1.53E-02
19GO:0009506: plasmodesma2.27E-02
20GO:0009507: chloroplast2.41E-02
21GO:0005737: cytoplasm2.75E-02
22GO:0031225: anchored component of membrane3.98E-02
23GO:0005802: trans-Golgi network4.06E-02
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Gene type



Gene DE type