Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G56170

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010793: regulation of mRNA export from nucleus0.00E+00
2GO:0010111: glyoxysome organization0.00E+00
3GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
4GO:0019395: fatty acid oxidation1.33E-05
5GO:0050684: regulation of mRNA processing1.33E-05
6GO:0032784: regulation of DNA-templated transcription, elongation2.46E-05
7GO:2000034: regulation of seed maturation2.46E-05
8GO:0019048: modulation by virus of host morphology or physiology3.83E-05
9GO:0033962: cytoplasmic mRNA processing body assembly1.11E-04
10GO:0019509: L-methionine salvage from methylthioadenosine1.11E-04
11GO:0010044: response to aluminum ion1.32E-04
12GO:0006875: cellular metal ion homeostasis1.54E-04
13GO:0008202: steroid metabolic process2.27E-04
14GO:0071732: cellular response to nitric oxide3.90E-04
15GO:0010030: positive regulation of seed germination3.90E-04
16GO:0009695: jasmonic acid biosynthetic process4.78E-04
17GO:0006825: copper ion transport4.78E-04
18GO:0031408: oxylipin biosynthetic process5.09E-04
19GO:0030433: ubiquitin-dependent ERAD pathway5.39E-04
20GO:0071369: cellular response to ethylene stimulus5.71E-04
21GO:0051028: mRNA transport6.34E-04
22GO:0009789: positive regulation of abscisic acid-activated signaling pathway6.34E-04
23GO:0010501: RNA secondary structure unwinding6.67E-04
24GO:0006635: fatty acid beta-oxidation8.02E-04
25GO:0016032: viral process8.37E-04
26GO:0071281: cellular response to iron ion8.71E-04
27GO:0006888: ER to Golgi vesicle-mediated transport1.13E-03
28GO:0010119: regulation of stomatal movement1.32E-03
29GO:0000209: protein polyubiquitination1.70E-03
30GO:0006417: regulation of translation2.17E-03
31GO:0009742: brassinosteroid mediated signaling pathway2.66E-03
32GO:0009723: response to ethylene5.52E-03
33GO:0006886: intracellular protein transport6.69E-03
34GO:0006869: lipid transport6.98E-03
35GO:0006397: mRNA processing7.80E-03
36GO:0009873: ethylene-activated signaling pathway9.06E-03
37GO:0009611: response to wounding1.15E-02
38GO:0055085: transmembrane transport1.34E-02
39GO:0007165: signal transduction3.16E-02
40GO:0016310: phosphorylation3.55E-02
RankGO TermAdjusted P value
1GO:0046522: S-methyl-5-thioribose kinase activity0.00E+00
2GO:0034450: ubiquitin-ubiquitin ligase activity4.83E-06
3GO:0003988: acetyl-CoA C-acyltransferase activity1.33E-05
4GO:0019829: cation-transporting ATPase activity2.46E-05
5GO:0008142: oxysterol binding1.78E-04
6GO:0005375: copper ion transmembrane transporter activity1.78E-04
7GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism3.33E-04
8GO:0004004: ATP-dependent RNA helicase activity1.13E-03
9GO:0035091: phosphatidylinositol binding1.75E-03
10GO:0008026: ATP-dependent helicase activity2.66E-03
11GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.36E-03
12GO:0042802: identical protein binding4.36E-03
13GO:0008289: lipid binding9.55E-03
14GO:0005524: ATP binding1.02E-02
15GO:0005507: copper ion binding1.46E-02
16GO:0005509: calcium ion binding1.76E-02
17GO:0005215: transporter activity2.01E-02
18GO:0003729: mRNA binding2.48E-02
19GO:0008270: zinc ion binding4.39E-02
RankGO TermAdjusted P value
1GO:0030127: COPII vesicle coat9.04E-05
2GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane1.32E-04
3GO:0009514: glyoxysome1.78E-04
4GO:0010494: cytoplasmic stress granule2.02E-04
5GO:0000932: P-body1.01E-03
6GO:0000151: ubiquitin ligase complex1.20E-03
7GO:0000325: plant-type vacuole1.32E-03
8GO:0031902: late endosome membrane1.57E-03
9GO:0000139: Golgi membrane2.36E-03
10GO:0005789: endoplasmic reticulum membrane2.66E-03
11GO:0005774: vacuolar membrane5.97E-03
12GO:0005777: peroxisome1.25E-02
13GO:0005802: trans-Golgi network1.58E-02
14GO:0005768: endosome1.73E-02
15GO:0005829: cytosol2.61E-02
16GO:0005730: nucleolus2.72E-02
17GO:0005794: Golgi apparatus3.12E-02
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Gene type



Gene DE type