GO Enrichment Analysis of Co-expressed Genes with
AT3G55605
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 2 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 3 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 4 | GO:0071433: cell wall repair | 0.00E+00 |
| 5 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.76E-05 |
| 6 | GO:0048448: stamen morphogenesis | 4.74E-05 |
| 7 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 4.74E-05 |
| 8 | GO:0006177: GMP biosynthetic process | 4.74E-05 |
| 9 | GO:0010450: inflorescence meristem growth | 4.74E-05 |
| 10 | GO:0006422: aspartyl-tRNA aminoacylation | 4.74E-05 |
| 11 | GO:0046686: response to cadmium ion | 5.89E-05 |
| 12 | GO:0006457: protein folding | 6.72E-05 |
| 13 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.17E-04 |
| 14 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 1.17E-04 |
| 15 | GO:0048833: specification of floral organ number | 1.17E-04 |
| 16 | GO:0045039: protein import into mitochondrial inner membrane | 2.00E-04 |
| 17 | GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery | 2.94E-04 |
| 18 | GO:0001676: long-chain fatty acid metabolic process | 2.94E-04 |
| 19 | GO:0000460: maturation of 5.8S rRNA | 3.94E-04 |
| 20 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 3.94E-04 |
| 21 | GO:0010188: response to microbial phytotoxin | 3.94E-04 |
| 22 | GO:0006564: L-serine biosynthetic process | 5.00E-04 |
| 23 | GO:0000470: maturation of LSU-rRNA | 6.13E-04 |
| 24 | GO:0009880: embryonic pattern specification | 1.11E-03 |
| 25 | GO:0009408: response to heat | 1.12E-03 |
| 26 | GO:0071365: cellular response to auxin stimulus | 1.86E-03 |
| 27 | GO:0006626: protein targeting to mitochondrion | 2.03E-03 |
| 28 | GO:0010167: response to nitrate | 2.38E-03 |
| 29 | GO:0046688: response to copper ion | 2.38E-03 |
| 30 | GO:0000027: ribosomal large subunit assembly | 2.74E-03 |
| 31 | GO:0030150: protein import into mitochondrial matrix | 2.74E-03 |
| 32 | GO:0006406: mRNA export from nucleus | 2.74E-03 |
| 33 | GO:0006825: copper ion transport | 2.93E-03 |
| 34 | GO:0006334: nucleosome assembly | 3.12E-03 |
| 35 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.93E-03 |
| 36 | GO:0034220: ion transmembrane transport | 4.15E-03 |
| 37 | GO:0010501: RNA secondary structure unwinding | 4.15E-03 |
| 38 | GO:0006606: protein import into nucleus | 4.15E-03 |
| 39 | GO:0006662: glycerol ether metabolic process | 4.37E-03 |
| 40 | GO:0010193: response to ozone | 5.04E-03 |
| 41 | GO:0032502: developmental process | 5.28E-03 |
| 42 | GO:0010286: heat acclimation | 6.00E-03 |
| 43 | GO:0009615: response to virus | 6.50E-03 |
| 44 | GO:0006950: response to stress | 7.28E-03 |
| 45 | GO:0015031: protein transport | 7.59E-03 |
| 46 | GO:0045087: innate immune response | 9.22E-03 |
| 47 | GO:0034599: cellular response to oxidative stress | 9.51E-03 |
| 48 | GO:0006631: fatty acid metabolic process | 1.04E-02 |
| 49 | GO:0042546: cell wall biogenesis | 1.13E-02 |
| 50 | GO:0000154: rRNA modification | 1.20E-02 |
| 51 | GO:0009965: leaf morphogenesis | 1.20E-02 |
| 52 | GO:0009735: response to cytokinin | 1.30E-02 |
| 53 | GO:0009553: embryo sac development | 1.71E-02 |
| 54 | GO:0018105: peptidyl-serine phosphorylation | 1.78E-02 |
| 55 | GO:0050832: defense response to fungus | 2.23E-02 |
| 56 | GO:0006470: protein dephosphorylation | 2.83E-02 |
| 57 | GO:0009617: response to bacterium | 2.92E-02 |
| 58 | GO:0042254: ribosome biogenesis | 3.56E-02 |
| 59 | GO:0080167: response to karrikin | 4.09E-02 |
| 60 | GO:0016192: vesicle-mediated transport | 4.24E-02 |
| 61 | GO:0046777: protein autophosphorylation | 4.30E-02 |
| 62 | GO:0045454: cell redox homeostasis | 4.65E-02 |
| 63 | GO:0006886: intracellular protein transport | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 2 | GO:0051082: unfolded protein binding | 6.21E-06 |
| 3 | GO:0004656: procollagen-proline 4-dioxygenase activity | 9.56E-06 |
| 4 | GO:0000166: nucleotide binding | 3.79E-05 |
| 5 | GO:0004815: aspartate-tRNA ligase activity | 4.74E-05 |
| 6 | GO:0031418: L-ascorbic acid binding | 1.14E-04 |
| 7 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.17E-04 |
| 8 | GO:0043021: ribonucleoprotein complex binding | 1.17E-04 |
| 9 | GO:0003938: IMP dehydrogenase activity | 1.17E-04 |
| 10 | GO:0004557: alpha-galactosidase activity | 2.00E-04 |
| 11 | GO:0052692: raffinose alpha-galactosidase activity | 2.00E-04 |
| 12 | GO:0016531: copper chaperone activity | 2.00E-04 |
| 13 | GO:0002020: protease binding | 5.00E-04 |
| 14 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 7.02E-04 |
| 15 | GO:0102391: decanoate--CoA ligase activity | 7.31E-04 |
| 16 | GO:0030515: snoRNA binding | 8.54E-04 |
| 17 | GO:0008320: protein transmembrane transporter activity | 8.54E-04 |
| 18 | GO:0004467: long-chain fatty acid-CoA ligase activity | 8.54E-04 |
| 19 | GO:0017056: structural constituent of nuclear pore | 9.81E-04 |
| 20 | GO:0008135: translation factor activity, RNA binding | 1.11E-03 |
| 21 | GO:0005487: nucleocytoplasmic transporter activity | 1.40E-03 |
| 22 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.03E-03 |
| 23 | GO:0031072: heat shock protein binding | 2.03E-03 |
| 24 | GO:0003712: transcription cofactor activity | 2.38E-03 |
| 25 | GO:0005528: FK506 binding | 2.74E-03 |
| 26 | GO:0047134: protein-disulfide reductase activity | 3.93E-03 |
| 27 | GO:0004791: thioredoxin-disulfide reductase activity | 4.59E-03 |
| 28 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.52E-03 |
| 29 | GO:0005524: ATP binding | 6.02E-03 |
| 30 | GO:0016597: amino acid binding | 6.25E-03 |
| 31 | GO:0015250: water channel activity | 6.50E-03 |
| 32 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 7.01E-03 |
| 33 | GO:0004721: phosphoprotein phosphatase activity | 7.28E-03 |
| 34 | GO:0004004: ATP-dependent RNA helicase activity | 7.28E-03 |
| 35 | GO:0004683: calmodulin-dependent protein kinase activity | 7.28E-03 |
| 36 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.81E-03 |
| 37 | GO:0003746: translation elongation factor activity | 9.22E-03 |
| 38 | GO:0042393: histone binding | 1.01E-02 |
| 39 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.23E-02 |
| 40 | GO:0051287: NAD binding | 1.26E-02 |
| 41 | GO:0015035: protein disulfide oxidoreductase activity | 1.78E-02 |
| 42 | GO:0008026: ATP-dependent helicase activity | 1.82E-02 |
| 43 | GO:0004386: helicase activity | 1.86E-02 |
| 44 | GO:0008565: protein transporter activity | 2.33E-02 |
| 45 | GO:0005525: GTP binding | 2.34E-02 |
| 46 | GO:0005506: iron ion binding | 2.84E-02 |
| 47 | GO:0008168: methyltransferase activity | 3.42E-02 |
| 48 | GO:0000287: magnesium ion binding | 3.47E-02 |
| 49 | GO:0004722: protein serine/threonine phosphatase activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0019034: viral replication complex | 0.00E+00 |
| 3 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 5.41E-05 |
| 4 | GO:0005758: mitochondrial intermembrane space | 1.14E-04 |
| 5 | GO:0070545: PeBoW complex | 1.17E-04 |
| 6 | GO:0031080: nuclear pore outer ring | 2.00E-04 |
| 7 | GO:0046861: glyoxysomal membrane | 2.00E-04 |
| 8 | GO:0005759: mitochondrial matrix | 2.67E-04 |
| 9 | GO:0005829: cytosol | 2.92E-04 |
| 10 | GO:0031428: box C/D snoRNP complex | 6.13E-04 |
| 11 | GO:0032588: trans-Golgi network membrane | 6.13E-04 |
| 12 | GO:0016363: nuclear matrix | 7.31E-04 |
| 13 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 8.54E-04 |
| 14 | GO:0030687: preribosome, large subunit precursor | 8.54E-04 |
| 15 | GO:0009514: glyoxysome | 1.11E-03 |
| 16 | GO:0031901: early endosome membrane | 1.25E-03 |
| 17 | GO:0005834: heterotrimeric G-protein complex | 1.48E-03 |
| 18 | GO:0032040: small-subunit processome | 1.86E-03 |
| 19 | GO:0005789: endoplasmic reticulum membrane | 1.96E-03 |
| 20 | GO:0005618: cell wall | 2.05E-03 |
| 21 | GO:0005730: nucleolus | 2.29E-03 |
| 22 | GO:0043234: protein complex | 2.56E-03 |
| 23 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.73E-03 |
| 24 | GO:0009506: plasmodesma | 5.24E-03 |
| 25 | GO:0032580: Golgi cisterna membrane | 5.75E-03 |
| 26 | GO:0000932: P-body | 6.50E-03 |
| 27 | GO:0048046: apoplast | 7.30E-03 |
| 28 | GO:0005743: mitochondrial inner membrane | 7.43E-03 |
| 29 | GO:0019005: SCF ubiquitin ligase complex | 7.81E-03 |
| 30 | GO:0005635: nuclear envelope | 1.43E-02 |
| 31 | GO:0005654: nucleoplasm | 2.01E-02 |
| 32 | GO:0005774: vacuolar membrane | 2.70E-02 |
| 33 | GO:0005840: ribosome | 3.02E-02 |
| 34 | GO:0022627: cytosolic small ribosomal subunit | 3.14E-02 |