GO Enrichment Analysis of Co-expressed Genes with
AT3G55510
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 2 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 3 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 4 | GO:0007141: male meiosis I | 0.00E+00 |
| 5 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.63E-05 |
| 6 | GO:0002143: tRNA wobble position uridine thiolation | 6.58E-05 |
| 7 | GO:0080120: CAAX-box protein maturation | 6.58E-05 |
| 8 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 6.58E-05 |
| 9 | GO:0071586: CAAX-box protein processing | 6.58E-05 |
| 10 | GO:0006422: aspartyl-tRNA aminoacylation | 6.58E-05 |
| 11 | GO:0010155: regulation of proton transport | 1.59E-04 |
| 12 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.59E-04 |
| 13 | GO:0006364: rRNA processing | 1.59E-04 |
| 14 | GO:0000027: ribosomal large subunit assembly | 1.81E-04 |
| 15 | GO:0009553: embryo sac development | 2.48E-04 |
| 16 | GO:1900055: regulation of leaf senescence | 2.69E-04 |
| 17 | GO:0080055: low-affinity nitrate transport | 2.69E-04 |
| 18 | GO:0007276: gamete generation | 3.90E-04 |
| 19 | GO:0000460: maturation of 5.8S rRNA | 5.20E-04 |
| 20 | GO:0046345: abscisic acid catabolic process | 5.20E-04 |
| 21 | GO:0001731: formation of translation preinitiation complex | 8.06E-04 |
| 22 | GO:0006777: Mo-molybdopterin cofactor biosynthetic process | 8.06E-04 |
| 23 | GO:0048232: male gamete generation | 8.06E-04 |
| 24 | GO:0000470: maturation of LSU-rRNA | 8.06E-04 |
| 25 | GO:0006499: N-terminal protein myristoylation | 9.21E-04 |
| 26 | GO:0043090: amino acid import | 1.12E-03 |
| 27 | GO:0000028: ribosomal small subunit assembly | 1.29E-03 |
| 28 | GO:0006002: fructose 6-phosphate metabolic process | 1.47E-03 |
| 29 | GO:0060321: acceptance of pollen | 1.47E-03 |
| 30 | GO:0051026: chiasma assembly | 2.05E-03 |
| 31 | GO:0015706: nitrate transport | 2.48E-03 |
| 32 | GO:0000266: mitochondrial fission | 2.48E-03 |
| 33 | GO:0010102: lateral root morphogenesis | 2.70E-03 |
| 34 | GO:0006446: regulation of translational initiation | 2.93E-03 |
| 35 | GO:0002237: response to molecule of bacterial origin | 2.93E-03 |
| 36 | GO:0010053: root epidermal cell differentiation | 3.16E-03 |
| 37 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.65E-03 |
| 38 | GO:0006487: protein N-linked glycosylation | 3.65E-03 |
| 39 | GO:0030150: protein import into mitochondrial matrix | 3.65E-03 |
| 40 | GO:0051302: regulation of cell division | 3.90E-03 |
| 41 | GO:0007131: reciprocal meiotic recombination | 4.43E-03 |
| 42 | GO:0010227: floral organ abscission | 4.70E-03 |
| 43 | GO:0042147: retrograde transport, endosome to Golgi | 5.26E-03 |
| 44 | GO:0010501: RNA secondary structure unwinding | 5.55E-03 |
| 45 | GO:0009749: response to glucose | 6.45E-03 |
| 46 | GO:0000302: response to reactive oxygen species | 6.76E-03 |
| 47 | GO:0042254: ribosome biogenesis | 6.82E-03 |
| 48 | GO:0007264: small GTPase mediated signal transduction | 7.08E-03 |
| 49 | GO:0009793: embryo development ending in seed dormancy | 7.09E-03 |
| 50 | GO:0006310: DNA recombination | 7.73E-03 |
| 51 | GO:0019760: glucosinolate metabolic process | 7.73E-03 |
| 52 | GO:0010252: auxin homeostasis | 7.73E-03 |
| 53 | GO:0001666: response to hypoxia | 8.74E-03 |
| 54 | GO:0009607: response to biotic stimulus | 9.08E-03 |
| 55 | GO:0042128: nitrate assimilation | 9.44E-03 |
| 56 | GO:0008219: cell death | 1.05E-02 |
| 57 | GO:0032259: methylation | 1.18E-02 |
| 58 | GO:0006865: amino acid transport | 1.20E-02 |
| 59 | GO:0009744: response to sucrose | 1.49E-02 |
| 60 | GO:0006260: DNA replication | 1.70E-02 |
| 61 | GO:0031347: regulation of defense response | 1.70E-02 |
| 62 | GO:0006857: oligopeptide transport | 1.93E-02 |
| 63 | GO:0006417: regulation of translation | 1.98E-02 |
| 64 | GO:0006096: glycolytic process | 2.07E-02 |
| 65 | GO:0009620: response to fungus | 2.21E-02 |
| 66 | GO:0006396: RNA processing | 2.41E-02 |
| 67 | GO:0006413: translational initiation | 3.32E-02 |
| 68 | GO:0010150: leaf senescence | 3.49E-02 |
| 69 | GO:0045490: pectin catabolic process | 3.49E-02 |
| 70 | GO:0006351: transcription, DNA-templated | 3.75E-02 |
| 71 | GO:0050832: defense response to fungus | 3.80E-02 |
| 72 | GO:0010468: regulation of gene expression | 3.95E-02 |
| 73 | GO:0006468: protein phosphorylation | 4.27E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 2 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 3 | GO:0061604: molybdopterin-synthase sulfurtransferase activity | 0.00E+00 |
| 4 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 5 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 6 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 7 | GO:0061605: molybdopterin-synthase adenylyltransferase activity | 0.00E+00 |
| 8 | GO:0000166: nucleotide binding | 1.13E-09 |
| 9 | GO:0030515: snoRNA binding | 2.24E-05 |
| 10 | GO:0019707: protein-cysteine S-acyltransferase activity | 6.58E-05 |
| 11 | GO:0042134: rRNA primary transcript binding | 6.58E-05 |
| 12 | GO:0004815: aspartate-tRNA ligase activity | 6.58E-05 |
| 13 | GO:0001054: RNA polymerase I activity | 8.19E-05 |
| 14 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 1.59E-04 |
| 15 | GO:0043021: ribonucleoprotein complex binding | 1.59E-04 |
| 16 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.59E-04 |
| 17 | GO:0052692: raffinose alpha-galactosidase activity | 2.69E-04 |
| 18 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 2.69E-04 |
| 19 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 2.69E-04 |
| 20 | GO:0070181: small ribosomal subunit rRNA binding | 2.69E-04 |
| 21 | GO:0004557: alpha-galactosidase activity | 2.69E-04 |
| 22 | GO:0004792: thiosulfate sulfurtransferase activity | 3.90E-04 |
| 23 | GO:0070628: proteasome binding | 5.20E-04 |
| 24 | GO:0008641: small protein activating enzyme activity | 6.60E-04 |
| 25 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 6.60E-04 |
| 26 | GO:0004004: ATP-dependent RNA helicase activity | 7.62E-04 |
| 27 | GO:0003872: 6-phosphofructokinase activity | 1.12E-03 |
| 28 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 1.29E-03 |
| 29 | GO:0015293: symporter activity | 1.50E-03 |
| 30 | GO:0003678: DNA helicase activity | 1.65E-03 |
| 31 | GO:0004713: protein tyrosine kinase activity | 2.05E-03 |
| 32 | GO:0004386: helicase activity | 2.75E-03 |
| 33 | GO:0004175: endopeptidase activity | 2.93E-03 |
| 34 | GO:0003954: NADH dehydrogenase activity | 3.65E-03 |
| 35 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 4.17E-03 |
| 36 | GO:0003676: nucleic acid binding | 4.70E-03 |
| 37 | GO:0008168: methyltransferase activity | 6.45E-03 |
| 38 | GO:0004721: phosphoprotein phosphatase activity | 9.79E-03 |
| 39 | GO:0004222: metalloendopeptidase activity | 1.13E-02 |
| 40 | GO:0003697: single-stranded DNA binding | 1.24E-02 |
| 41 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.32E-02 |
| 42 | GO:0003729: mRNA binding | 1.60E-02 |
| 43 | GO:0015171: amino acid transmembrane transporter activity | 1.98E-02 |
| 44 | GO:0005524: ATP binding | 1.99E-02 |
| 45 | GO:0015035: protein disulfide oxidoreductase activity | 2.41E-02 |
| 46 | GO:0008026: ATP-dependent helicase activity | 2.46E-02 |
| 47 | GO:0016740: transferase activity | 2.67E-02 |
| 48 | GO:0008565: protein transporter activity | 3.15E-02 |
| 49 | GO:0005525: GTP binding | 3.59E-02 |
| 50 | GO:0003743: translation initiation factor activity | 3.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034455: t-UTP complex | 0.00E+00 |
| 2 | GO:0019034: viral replication complex | 0.00E+00 |
| 3 | GO:0005730: nucleolus | 1.02E-09 |
| 4 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.46E-07 |
| 5 | GO:0032040: small-subunit processome | 1.28E-06 |
| 6 | GO:0030687: preribosome, large subunit precursor | 2.24E-05 |
| 7 | GO:0005736: DNA-directed RNA polymerase I complex | 4.72E-05 |
| 8 | GO:0000138: Golgi trans cisterna | 6.58E-05 |
| 9 | GO:0034388: Pwp2p-containing subcomplex of 90S preribosome | 6.58E-05 |
| 10 | GO:0031304: intrinsic component of mitochondrial inner membrane | 1.59E-04 |
| 11 | GO:0070545: PeBoW complex | 1.59E-04 |
| 12 | GO:0005945: 6-phosphofructokinase complex | 6.60E-04 |
| 13 | GO:0008250: oligosaccharyltransferase complex | 6.60E-04 |
| 14 | GO:0016282: eukaryotic 43S preinitiation complex | 8.06E-04 |
| 15 | GO:0030904: retromer complex | 8.06E-04 |
| 16 | GO:0033290: eukaryotic 48S preinitiation complex | 9.59E-04 |
| 17 | GO:0005680: anaphase-promoting complex | 1.65E-03 |
| 18 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.16E-03 |
| 19 | GO:0005769: early endosome | 3.40E-03 |
| 20 | GO:0043234: protein complex | 3.40E-03 |
| 21 | GO:0005839: proteasome core complex | 4.17E-03 |
| 22 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 4.98E-03 |
| 23 | GO:0000790: nuclear chromatin | 5.26E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 6.45E-03 |
| 25 | GO:0005783: endoplasmic reticulum | 1.18E-02 |
| 26 | GO:0031902: late endosome membrane | 1.40E-02 |
| 27 | GO:0005789: endoplasmic reticulum membrane | 1.66E-02 |
| 28 | GO:0005829: cytosol | 1.87E-02 |
| 29 | GO:0005834: heterotrimeric G-protein complex | 2.17E-02 |
| 30 | GO:0005794: Golgi apparatus | 2.20E-02 |
| 31 | GO:0005634: nucleus | 2.41E-02 |
| 32 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.51E-02 |
| 33 | GO:0005623: cell | 2.82E-02 |
| 34 | GO:0005622: intracellular | 3.87E-02 |
| 35 | GO:0005840: ribosome | 4.62E-02 |