GO Enrichment Analysis of Co-expressed Genes with
AT3G54950
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:1902001: fatty acid transmembrane transport | 0.00E+00 |
2 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
3 | GO:0006858: extracellular transport | 0.00E+00 |
4 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
5 | GO:0080180: 2-methylguanosine metabolic process | 0.00E+00 |
6 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
7 | GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response | 0.00E+00 |
8 | GO:0036258: multivesicular body assembly | 0.00E+00 |
9 | GO:0046109: uridine biosynthetic process | 0.00E+00 |
10 | GO:0007141: male meiosis I | 0.00E+00 |
11 | GO:0048227: plasma membrane to endosome transport | 0.00E+00 |
12 | GO:0006983: ER overload response | 0.00E+00 |
13 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
14 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
15 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
16 | GO:0046686: response to cadmium ion | 7.48E-05 |
17 | GO:0006014: D-ribose metabolic process | 1.15E-04 |
18 | GO:1990641: response to iron ion starvation | 2.72E-04 |
19 | GO:0019567: arabinose biosynthetic process | 2.72E-04 |
20 | GO:0006422: aspartyl-tRNA aminoacylation | 2.72E-04 |
21 | GO:0009821: alkaloid biosynthetic process | 3.90E-04 |
22 | GO:0006896: Golgi to vacuole transport | 5.39E-04 |
23 | GO:0043069: negative regulation of programmed cell death | 5.39E-04 |
24 | GO:0055088: lipid homeostasis | 5.99E-04 |
25 | GO:0050684: regulation of mRNA processing | 5.99E-04 |
26 | GO:0015908: fatty acid transport | 5.99E-04 |
27 | GO:0006101: citrate metabolic process | 5.99E-04 |
28 | GO:0043066: negative regulation of apoptotic process | 5.99E-04 |
29 | GO:0042325: regulation of phosphorylation | 5.99E-04 |
30 | GO:0071668: plant-type cell wall assembly | 5.99E-04 |
31 | GO:0019441: tryptophan catabolic process to kynurenine | 5.99E-04 |
32 | GO:0000266: mitochondrial fission | 7.11E-04 |
33 | GO:2000034: regulation of seed maturation | 9.72E-04 |
34 | GO:1900055: regulation of leaf senescence | 9.72E-04 |
35 | GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening | 9.72E-04 |
36 | GO:0032784: regulation of DNA-templated transcription, elongation | 9.72E-04 |
37 | GO:0009225: nucleotide-sugar metabolic process | 1.01E-03 |
38 | GO:0006099: tricarboxylic acid cycle | 1.04E-03 |
39 | GO:2001289: lipid X metabolic process | 1.39E-03 |
40 | GO:0006107: oxaloacetate metabolic process | 1.39E-03 |
41 | GO:0072334: UDP-galactose transmembrane transport | 1.39E-03 |
42 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.39E-03 |
43 | GO:0070676: intralumenal vesicle formation | 1.39E-03 |
44 | GO:0006986: response to unfolded protein | 1.39E-03 |
45 | GO:0000187: activation of MAPK activity | 1.39E-03 |
46 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 1.39E-03 |
47 | GO:0016998: cell wall macromolecule catabolic process | 1.50E-03 |
48 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.64E-03 |
49 | GO:0006012: galactose metabolic process | 1.79E-03 |
50 | GO:0045227: capsule polysaccharide biosynthetic process | 1.86E-03 |
51 | GO:0033320: UDP-D-xylose biosynthetic process | 1.86E-03 |
52 | GO:0033358: UDP-L-arabinose biosynthetic process | 1.86E-03 |
53 | GO:2000038: regulation of stomatal complex development | 1.86E-03 |
54 | GO:0006734: NADH metabolic process | 1.86E-03 |
55 | GO:0006097: glyoxylate cycle | 2.37E-03 |
56 | GO:0006461: protein complex assembly | 2.37E-03 |
57 | GO:0006096: glycolytic process | 2.44E-03 |
58 | GO:0009620: response to fungus | 2.75E-03 |
59 | GO:0019252: starch biosynthetic process | 2.82E-03 |
60 | GO:0048232: male gamete generation | 2.93E-03 |
61 | GO:0042732: D-xylose metabolic process | 2.93E-03 |
62 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.93E-03 |
63 | GO:1900425: negative regulation of defense response to bacterium | 2.93E-03 |
64 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 2.93E-03 |
65 | GO:0010405: arabinogalactan protein metabolic process | 2.93E-03 |
66 | GO:0006468: protein phosphorylation | 3.37E-03 |
67 | GO:2000037: regulation of stomatal complex patterning | 3.52E-03 |
68 | GO:0048280: vesicle fusion with Golgi apparatus | 3.52E-03 |
69 | GO:0006744: ubiquinone biosynthetic process | 4.15E-03 |
70 | GO:1900056: negative regulation of leaf senescence | 4.15E-03 |
71 | GO:0000338: protein deneddylation | 4.15E-03 |
72 | GO:0042773: ATP synthesis coupled electron transport | 4.15E-03 |
73 | GO:0006400: tRNA modification | 4.15E-03 |
74 | GO:1902074: response to salt | 4.15E-03 |
75 | GO:0045454: cell redox homeostasis | 4.17E-03 |
76 | GO:0009615: response to virus | 4.36E-03 |
77 | GO:0009058: biosynthetic process | 4.39E-03 |
78 | GO:0006102: isocitrate metabolic process | 4.82E-03 |
79 | GO:0016559: peroxisome fission | 4.82E-03 |
80 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 4.82E-03 |
81 | GO:1900150: regulation of defense response to fungus | 4.82E-03 |
82 | GO:0006605: protein targeting | 4.82E-03 |
83 | GO:0006972: hyperosmotic response | 5.52E-03 |
84 | GO:0010208: pollen wall assembly | 5.52E-03 |
85 | GO:0015996: chlorophyll catabolic process | 5.52E-03 |
86 | GO:0030968: endoplasmic reticulum unfolded protein response | 5.52E-03 |
87 | GO:0017004: cytochrome complex assembly | 5.52E-03 |
88 | GO:0010150: leaf senescence | 6.18E-03 |
89 | GO:0046685: response to arsenic-containing substance | 6.25E-03 |
90 | GO:0051865: protein autoubiquitination | 6.25E-03 |
91 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 7.03E-03 |
92 | GO:0010629: negative regulation of gene expression | 7.82E-03 |
93 | GO:0051026: chiasma assembly | 7.82E-03 |
94 | GO:0006032: chitin catabolic process | 7.82E-03 |
95 | GO:0016310: phosphorylation | 8.22E-03 |
96 | GO:0000038: very long-chain fatty acid metabolic process | 8.66E-03 |
97 | GO:0006913: nucleocytoplasmic transport | 8.66E-03 |
98 | GO:0030148: sphingolipid biosynthetic process | 8.66E-03 |
99 | GO:0015706: nitrate transport | 9.52E-03 |
100 | GO:0010588: cotyledon vascular tissue pattern formation | 1.04E-02 |
101 | GO:0006807: nitrogen compound metabolic process | 1.04E-02 |
102 | GO:0006626: protein targeting to mitochondrion | 1.04E-02 |
103 | GO:0006108: malate metabolic process | 1.04E-02 |
104 | GO:0010229: inflorescence development | 1.04E-02 |
105 | GO:0009636: response to toxic substance | 1.05E-02 |
106 | GO:0010167: response to nitrate | 1.23E-02 |
107 | GO:0010030: positive regulation of seed germination | 1.23E-02 |
108 | GO:0034976: response to endoplasmic reticulum stress | 1.33E-02 |
109 | GO:0000027: ribosomal large subunit assembly | 1.43E-02 |
110 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.43E-02 |
111 | GO:0006874: cellular calcium ion homeostasis | 1.53E-02 |
112 | GO:0009814: defense response, incompatible interaction | 1.75E-02 |
113 | GO:0007131: reciprocal meiotic recombination | 1.75E-02 |
114 | GO:0080092: regulation of pollen tube growth | 1.75E-02 |
115 | GO:0010227: floral organ abscission | 1.86E-02 |
116 | GO:0042147: retrograde transport, endosome to Golgi | 2.09E-02 |
117 | GO:0010305: leaf vascular tissue pattern formation | 2.33E-02 |
118 | GO:0009646: response to absence of light | 2.45E-02 |
119 | GO:0006623: protein targeting to vacuole | 2.58E-02 |
120 | GO:0010183: pollen tube guidance | 2.58E-02 |
121 | GO:0009749: response to glucose | 2.58E-02 |
122 | GO:0055072: iron ion homeostasis | 2.58E-02 |
123 | GO:0071554: cell wall organization or biogenesis | 2.71E-02 |
124 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.71E-02 |
125 | GO:0006633: fatty acid biosynthetic process | 2.82E-02 |
126 | GO:0009630: gravitropism | 2.84E-02 |
127 | GO:0007264: small GTPase mediated signal transduction | 2.84E-02 |
128 | GO:0040008: regulation of growth | 2.96E-02 |
129 | GO:0010252: auxin homeostasis | 3.10E-02 |
130 | GO:0006310: DNA recombination | 3.10E-02 |
131 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.47E-02 |
132 | GO:0007166: cell surface receptor signaling pathway | 3.55E-02 |
133 | GO:0042128: nitrate assimilation | 3.80E-02 |
134 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.95E-02 |
135 | GO:0006950: response to stress | 3.95E-02 |
136 | GO:0016311: dephosphorylation | 4.10E-02 |
137 | GO:0030244: cellulose biosynthetic process | 4.25E-02 |
138 | GO:0009832: plant-type cell wall biogenesis | 4.40E-02 |
139 | GO:0009738: abscisic acid-activated signaling pathway | 4.53E-02 |
140 | GO:0009407: toxin catabolic process | 4.55E-02 |
141 | GO:0010043: response to zinc ion | 4.71E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0032442: phenylcoumaran benzylic ether reductase activity | 0.00E+00 |
2 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
3 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
4 | GO:0016504: peptidase activator activity | 0.00E+00 |
5 | GO:0016301: kinase activity | 3.53E-05 |
6 | GO:0009055: electron carrier activity | 6.23E-05 |
7 | GO:0005524: ATP binding | 6.85E-05 |
8 | GO:0005496: steroid binding | 7.90E-05 |
9 | GO:0004747: ribokinase activity | 1.58E-04 |
10 | GO:0003978: UDP-glucose 4-epimerase activity | 1.58E-04 |
11 | GO:0008865: fructokinase activity | 2.62E-04 |
12 | GO:0004815: aspartate-tRNA ligase activity | 2.72E-04 |
13 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 2.72E-04 |
14 | GO:0019707: protein-cysteine S-acyltransferase activity | 2.72E-04 |
15 | GO:0015245: fatty acid transporter activity | 2.72E-04 |
16 | GO:0004674: protein serine/threonine kinase activity | 3.29E-04 |
17 | GO:0004743: pyruvate kinase activity | 4.62E-04 |
18 | GO:0030955: potassium ion binding | 4.62E-04 |
19 | GO:0016844: strictosidine synthase activity | 4.62E-04 |
20 | GO:0003994: aconitate hydratase activity | 5.99E-04 |
21 | GO:0050736: O-malonyltransferase activity | 5.99E-04 |
22 | GO:0045140: inositol phosphoceramide synthase activity | 5.99E-04 |
23 | GO:0004061: arylformamidase activity | 5.99E-04 |
24 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 5.99E-04 |
25 | GO:0015036: disulfide oxidoreductase activity | 5.99E-04 |
26 | GO:0004634: phosphopyruvate hydratase activity | 5.99E-04 |
27 | GO:0052692: raffinose alpha-galactosidase activity | 9.72E-04 |
28 | GO:0005093: Rab GDP-dissociation inhibitor activity | 9.72E-04 |
29 | GO:0004557: alpha-galactosidase activity | 9.72E-04 |
30 | GO:0004751: ribose-5-phosphate isomerase activity | 9.72E-04 |
31 | GO:0016805: dipeptidase activity | 9.72E-04 |
32 | GO:0003954: NADH dehydrogenase activity | 1.24E-03 |
33 | GO:0070628: proteasome binding | 1.86E-03 |
34 | GO:0050373: UDP-arabinose 4-epimerase activity | 1.86E-03 |
35 | GO:0000287: magnesium ion binding | 2.21E-03 |
36 | GO:0005459: UDP-galactose transmembrane transporter activity | 2.37E-03 |
37 | GO:0004040: amidase activity | 2.37E-03 |
38 | GO:0048040: UDP-glucuronate decarboxylase activity | 2.93E-03 |
39 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.93E-03 |
40 | GO:0047714: galactolipase activity | 2.93E-03 |
41 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 2.93E-03 |
42 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 2.93E-03 |
43 | GO:0036402: proteasome-activating ATPase activity | 2.93E-03 |
44 | GO:0016615: malate dehydrogenase activity | 2.93E-03 |
45 | GO:0015035: protein disulfide oxidoreductase activity | 3.20E-03 |
46 | GO:0070403: NAD+ binding | 3.52E-03 |
47 | GO:0102391: decanoate--CoA ligase activity | 3.52E-03 |
48 | GO:0030060: L-malate dehydrogenase activity | 3.52E-03 |
49 | GO:0004656: procollagen-proline 4-dioxygenase activity | 3.52E-03 |
50 | GO:0008235: metalloexopeptidase activity | 4.15E-03 |
51 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 4.15E-03 |
52 | GO:0004467: long-chain fatty acid-CoA ligase activity | 4.15E-03 |
53 | GO:0052747: sinapyl alcohol dehydrogenase activity | 4.82E-03 |
54 | GO:0004708: MAP kinase kinase activity | 4.82E-03 |
55 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 4.82E-03 |
56 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 5.52E-03 |
57 | GO:0005096: GTPase activator activity | 5.97E-03 |
58 | GO:0071949: FAD binding | 6.25E-03 |
59 | GO:0003678: DNA helicase activity | 6.25E-03 |
60 | GO:0015112: nitrate transmembrane transporter activity | 7.03E-03 |
61 | GO:0045309: protein phosphorylated amino acid binding | 7.03E-03 |
62 | GO:0004568: chitinase activity | 7.82E-03 |
63 | GO:0051539: 4 iron, 4 sulfur cluster binding | 8.22E-03 |
64 | GO:0008794: arsenate reductase (glutaredoxin) activity | 8.66E-03 |
65 | GO:0019904: protein domain specific binding | 8.66E-03 |
66 | GO:0004177: aminopeptidase activity | 8.66E-03 |
67 | GO:0008378: galactosyltransferase activity | 9.52E-03 |
68 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 9.52E-03 |
69 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.01E-02 |
70 | GO:0019888: protein phosphatase regulator activity | 1.04E-02 |
71 | GO:0000175: 3'-5'-exoribonuclease activity | 1.04E-02 |
72 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.04E-02 |
73 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.04E-02 |
74 | GO:0016887: ATPase activity | 1.11E-02 |
75 | GO:0004535: poly(A)-specific ribonuclease activity | 1.13E-02 |
76 | GO:0017025: TBP-class protein binding | 1.23E-02 |
77 | GO:0005217: intracellular ligand-gated ion channel activity | 1.23E-02 |
78 | GO:0004970: ionotropic glutamate receptor activity | 1.23E-02 |
79 | GO:0051536: iron-sulfur cluster binding | 1.43E-02 |
80 | GO:0031418: L-ascorbic acid binding | 1.43E-02 |
81 | GO:0043130: ubiquitin binding | 1.43E-02 |
82 | GO:0008408: 3'-5' exonuclease activity | 1.64E-02 |
83 | GO:0004540: ribonuclease activity | 1.64E-02 |
84 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.64E-02 |
85 | GO:0016740: transferase activity | 1.84E-02 |
86 | GO:0047134: protein-disulfide reductase activity | 2.09E-02 |
87 | GO:0005507: copper ion binding | 2.32E-02 |
88 | GO:0001085: RNA polymerase II transcription factor binding | 2.33E-02 |
89 | GO:0004791: thioredoxin-disulfide reductase activity | 2.45E-02 |
90 | GO:0050662: coenzyme binding | 2.45E-02 |
91 | GO:0004872: receptor activity | 2.58E-02 |
92 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 2.71E-02 |
93 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 3.24E-02 |
94 | GO:0016413: O-acetyltransferase activity | 3.38E-02 |
95 | GO:0008194: UDP-glycosyltransferase activity | 3.47E-02 |
96 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 3.80E-02 |
97 | GO:0004806: triglyceride lipase activity | 3.95E-02 |
98 | GO:0004004: ATP-dependent RNA helicase activity | 3.95E-02 |
99 | GO:0004683: calmodulin-dependent protein kinase activity | 3.95E-02 |
100 | GO:0005215: transporter activity | 4.48E-02 |
101 | GO:0030145: manganese ion binding | 4.71E-02 |
102 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 4.71E-02 |
103 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.71E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0005829: cytosol | 3.83E-06 |
2 | GO:0005886: plasma membrane | 1.09E-05 |
3 | GO:0005794: Golgi apparatus | 1.61E-05 |
4 | GO:0005635: nuclear envelope | 3.40E-05 |
5 | GO:0005783: endoplasmic reticulum | 4.04E-05 |
6 | GO:0031902: late endosome membrane | 1.54E-04 |
7 | GO:0030014: CCR4-NOT complex | 2.72E-04 |
8 | GO:0000138: Golgi trans cisterna | 2.72E-04 |
9 | GO:0031304: intrinsic component of mitochondrial inner membrane | 5.99E-04 |
10 | GO:0000015: phosphopyruvate hydratase complex | 5.99E-04 |
11 | GO:0031314: extrinsic component of mitochondrial inner membrane | 5.99E-04 |
12 | GO:0030658: transport vesicle membrane | 1.39E-03 |
13 | GO:0005741: mitochondrial outer membrane | 1.50E-03 |
14 | GO:0016021: integral component of membrane | 2.26E-03 |
15 | GO:0005746: mitochondrial respiratory chain | 2.37E-03 |
16 | GO:0000813: ESCRT I complex | 2.37E-03 |
17 | GO:0030140: trans-Golgi network transport vesicle | 2.93E-03 |
18 | GO:0030173: integral component of Golgi membrane | 3.52E-03 |
19 | GO:0031597: cytosolic proteasome complex | 3.52E-03 |
20 | GO:0005737: cytoplasm | 3.58E-03 |
21 | GO:0031595: nuclear proteasome complex | 4.15E-03 |
22 | GO:0012507: ER to Golgi transport vesicle membrane | 4.82E-03 |
23 | GO:0045273: respiratory chain complex II | 4.82E-03 |
24 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 4.82E-03 |
25 | GO:0008180: COP9 signalosome | 6.25E-03 |
26 | GO:0008540: proteasome regulatory particle, base subcomplex | 7.03E-03 |
27 | GO:0009506: plasmodesma | 7.16E-03 |
28 | GO:0005740: mitochondrial envelope | 7.82E-03 |
29 | GO:0048471: perinuclear region of cytoplasm | 8.66E-03 |
30 | GO:0005789: endoplasmic reticulum membrane | 8.97E-03 |
31 | GO:0005750: mitochondrial respiratory chain complex III | 1.13E-02 |
32 | GO:0031966: mitochondrial membrane | 1.17E-02 |
33 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.23E-02 |
34 | GO:0016020: membrane | 1.27E-02 |
35 | GO:0005769: early endosome | 1.33E-02 |
36 | GO:0045271: respiratory chain complex I | 1.53E-02 |
37 | GO:0005839: proteasome core complex | 1.64E-02 |
38 | GO:0005774: vacuolar membrane | 1.70E-02 |
39 | GO:0005773: vacuole | 1.76E-02 |
40 | GO:0000790: nuclear chromatin | 2.09E-02 |
41 | GO:0030136: clathrin-coated vesicle | 2.09E-02 |
42 | GO:0005743: mitochondrial inner membrane | 2.12E-02 |
43 | GO:0005654: nucleoplasm | 2.19E-02 |
44 | GO:0005770: late endosome | 2.33E-02 |
45 | GO:0009524: phragmoplast | 2.37E-02 |
46 | GO:0019898: extrinsic component of membrane | 2.58E-02 |
47 | GO:0031965: nuclear membrane | 2.58E-02 |
48 | GO:0005802: trans-Golgi network | 2.76E-02 |
49 | GO:0005730: nucleolus | 3.09E-02 |
50 | GO:0032580: Golgi cisterna membrane | 3.10E-02 |
51 | GO:0005778: peroxisomal membrane | 3.24E-02 |
52 | GO:0005667: transcription factor complex | 3.80E-02 |
53 | GO:0000325: plant-type vacuole | 4.71E-02 |