GO Enrichment Analysis of Co-expressed Genes with
AT3G54750
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016048: detection of temperature stimulus | 0.00E+00 |
| 2 | GO:0031508: pericentric heterochromatin assembly | 0.00E+00 |
| 3 | GO:0010424: DNA methylation on cytosine within a CG sequence | 1.05E-08 |
| 4 | GO:0010216: maintenance of DNA methylation | 4.91E-06 |
| 5 | GO:0000032: cell wall mannoprotein biosynthetic process | 1.04E-05 |
| 6 | GO:0032025: response to cobalt ion | 1.04E-05 |
| 7 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 2.78E-05 |
| 8 | GO:0090309: positive regulation of methylation-dependent chromatin silencing | 2.78E-05 |
| 9 | GO:0006342: chromatin silencing | 2.93E-05 |
| 10 | GO:0032776: DNA methylation on cytosine | 5.03E-05 |
| 11 | GO:0033591: response to L-ascorbic acid | 5.03E-05 |
| 12 | GO:0070828: heterochromatin organization | 5.03E-05 |
| 13 | GO:0009298: GDP-mannose biosynthetic process | 7.70E-05 |
| 14 | GO:0009554: megasporogenesis | 2.11E-04 |
| 15 | GO:0016569: covalent chromatin modification | 2.53E-04 |
| 16 | GO:0044030: regulation of DNA methylation | 3.32E-04 |
| 17 | GO:0006349: regulation of gene expression by genetic imprinting | 4.18E-04 |
| 18 | GO:0006325: chromatin organization | 4.63E-04 |
| 19 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.55E-04 |
| 20 | GO:0010143: cutin biosynthetic process | 6.53E-04 |
| 21 | GO:0010020: chloroplast fission | 6.53E-04 |
| 22 | GO:0006334: nucleosome assembly | 9.11E-04 |
| 23 | GO:0009294: DNA mediated transformation | 1.02E-03 |
| 24 | GO:0006284: base-excision repair | 1.08E-03 |
| 25 | GO:0000271: polysaccharide biosynthetic process | 1.19E-03 |
| 26 | GO:0045489: pectin biosynthetic process | 1.25E-03 |
| 27 | GO:0010411: xyloglucan metabolic process | 2.04E-03 |
| 28 | GO:0016311: dephosphorylation | 2.11E-03 |
| 29 | GO:0051301: cell division | 2.37E-03 |
| 30 | GO:0010043: response to zinc ion | 2.41E-03 |
| 31 | GO:0009910: negative regulation of flower development | 2.41E-03 |
| 32 | GO:0016051: carbohydrate biosynthetic process | 2.56E-03 |
| 33 | GO:0042546: cell wall biogenesis | 3.12E-03 |
| 34 | GO:0006486: protein glycosylation | 3.72E-03 |
| 35 | GO:0071555: cell wall organization | 4.36E-03 |
| 36 | GO:0051726: regulation of cell cycle | 4.92E-03 |
| 37 | GO:0009790: embryo development | 6.14E-03 |
| 38 | GO:0006633: fatty acid biosynthetic process | 6.46E-03 |
| 39 | GO:0040008: regulation of growth | 6.67E-03 |
| 40 | GO:0010468: regulation of gene expression | 7.79E-03 |
| 41 | GO:0006970: response to osmotic stress | 9.84E-03 |
| 42 | GO:0007049: cell cycle | 1.01E-02 |
| 43 | GO:0080167: response to karrikin | 1.09E-02 |
| 44 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.11E-02 |
| 45 | GO:0045892: negative regulation of transcription, DNA-templated | 1.25E-02 |
| 46 | GO:0006281: DNA repair | 1.43E-02 |
| 47 | GO:0009734: auxin-activated signaling pathway | 1.82E-02 |
| 48 | GO:0009908: flower development | 2.00E-02 |
| 49 | GO:0009735: response to cytokinin | 2.02E-02 |
| 50 | GO:0009416: response to light stimulus | 2.15E-02 |
| 51 | GO:0009414: response to water deprivation | 3.50E-02 |
| 52 | GO:0042742: defense response to bacterium | 3.56E-02 |
| 53 | GO:0009733: response to auxin | 3.87E-02 |
| 54 | GO:0005975: carbohydrate metabolic process | 4.79E-02 |
| 55 | GO:0046686: response to cadmium ion | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004476: mannose-6-phosphate isomerase activity | 1.04E-05 |
| 2 | GO:0004312: fatty acid synthase activity | 2.78E-05 |
| 3 | GO:0046982: protein heterodimerization activity | 3.50E-05 |
| 4 | GO:0003682: chromatin binding | 3.94E-05 |
| 5 | GO:0010429: methyl-CpNpN binding | 5.03E-05 |
| 6 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 5.03E-05 |
| 7 | GO:0010428: methyl-CpNpG binding | 5.03E-05 |
| 8 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 5.09E-05 |
| 9 | GO:0010385: double-stranded methylated DNA binding | 1.07E-04 |
| 10 | GO:0042393: histone binding | 1.19E-04 |
| 11 | GO:0003677: DNA binding | 1.21E-04 |
| 12 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.40E-04 |
| 13 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.74E-04 |
| 14 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.74E-04 |
| 15 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 2.11E-04 |
| 16 | GO:0008327: methyl-CpG binding | 5.09E-04 |
| 17 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 9.65E-04 |
| 18 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.44E-03 |
| 19 | GO:0016791: phosphatase activity | 1.63E-03 |
| 20 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.04E-03 |
| 21 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.33E-03 |
| 22 | GO:0005507: copper ion binding | 3.08E-03 |
| 23 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.26E-03 |
| 24 | GO:0016746: transferase activity, transferring acyl groups | 4.82E-03 |
| 25 | GO:0016758: transferase activity, transferring hexosyl groups | 5.42E-03 |
| 26 | GO:0008168: methyltransferase activity | 9.10E-03 |
| 27 | GO:0061630: ubiquitin protein ligase activity | 1.13E-02 |
| 28 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.62E-02 |
| 29 | GO:0004842: ubiquitin-protein transferase activity | 4.48E-02 |
| 30 | GO:0004672: protein kinase activity | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000788: nuclear nucleosome | 0.00E+00 |
| 2 | GO:0005721: pericentric heterochromatin | 0.00E+00 |
| 3 | GO:0000786: nucleosome | 9.68E-09 |
| 4 | GO:0000790: nuclear chromatin | 2.43E-05 |
| 5 | GO:0000792: heterochromatin | 2.78E-05 |
| 6 | GO:0010369: chromocenter | 2.11E-04 |
| 7 | GO:0005720: nuclear heterochromatin | 3.74E-04 |
| 8 | GO:0009506: plasmodesma | 2.73E-03 |
| 9 | GO:0005618: cell wall | 2.84E-03 |
| 10 | GO:0031225: anchored component of membrane | 3.37E-03 |
| 11 | GO:0009505: plant-type cell wall | 5.46E-03 |
| 12 | GO:0005730: nucleolus | 7.36E-03 |
| 13 | GO:0046658: anchored component of plasma membrane | 8.38E-03 |
| 14 | GO:0048046: apoplast | 1.59E-02 |
| 15 | GO:0009579: thylakoid | 2.44E-02 |
| 16 | GO:0009536: plastid | 4.12E-02 |
| 17 | GO:0000139: Golgi membrane | 4.42E-02 |