Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G54050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
2GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
3GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
4GO:0090042: tubulin deacetylation0.00E+00
5GO:0045176: apical protein localization0.00E+00
6GO:0034337: RNA folding0.00E+00
7GO:0006223: uracil salvage0.00E+00
8GO:0033614: chloroplast proton-transporting ATP synthase complex assembly0.00E+00
9GO:0006429: leucyl-tRNA aminoacylation0.00E+00
10GO:0016553: base conversion or substitution editing0.00E+00
11GO:0080114: positive regulation of glycine hydroxymethyltransferase activity0.00E+00
12GO:0002184: cytoplasmic translational termination0.00E+00
13GO:0042820: vitamin B6 catabolic process0.00E+00
14GO:1904966: positive regulation of vitamin E biosynthetic process0.00E+00
15GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
16GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
17GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
18GO:1904964: positive regulation of phytol biosynthetic process0.00E+00
19GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
20GO:0061635: regulation of protein complex stability0.00E+00
21GO:1902326: positive regulation of chlorophyll biosynthetic process0.00E+00
22GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
23GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
24GO:0006399: tRNA metabolic process0.00E+00
25GO:0042821: pyridoxal biosynthetic process0.00E+00
26GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
27GO:0005996: monosaccharide metabolic process0.00E+00
28GO:0015979: photosynthesis2.72E-15
29GO:0010027: thylakoid membrane organization2.02E-13
30GO:0032544: plastid translation2.32E-11
31GO:0009773: photosynthetic electron transport in photosystem I5.58E-10
32GO:0009658: chloroplast organization4.86E-09
33GO:0010196: nonphotochemical quenching4.13E-08
34GO:0009735: response to cytokinin1.06E-07
35GO:0006412: translation4.97E-07
36GO:0006000: fructose metabolic process8.64E-07
37GO:0042254: ribosome biogenesis3.51E-06
38GO:0015995: chlorophyll biosynthetic process3.62E-05
39GO:0016117: carotenoid biosynthetic process3.98E-05
40GO:0030388: fructose 1,6-bisphosphate metabolic process4.14E-05
41GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.14E-05
42GO:0010275: NAD(P)H dehydrogenase complex assembly4.14E-05
43GO:0018298: protein-chromophore linkage4.77E-05
44GO:1901259: chloroplast rRNA processing6.72E-05
45GO:0010207: photosystem II assembly7.97E-05
46GO:0055114: oxidation-reduction process1.04E-04
47GO:0090391: granum assembly1.28E-04
48GO:0006518: peptide metabolic process1.28E-04
49GO:0009657: plastid organization1.94E-04
50GO:0006002: fructose 6-phosphate metabolic process1.94E-04
51GO:0071482: cellular response to light stimulus1.94E-04
52GO:0010206: photosystem II repair2.54E-04
53GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.57E-04
54GO:0010731: protein glutathionylation2.57E-04
55GO:0010205: photoinhibition3.23E-04
56GO:0006546: glycine catabolic process4.23E-04
57GO:0019464: glycine decarboxylation via glycine cleavage system4.23E-04
58GO:0009765: photosynthesis, light harvesting4.23E-04
59GO:0045727: positive regulation of translation4.23E-04
60GO:0042335: cuticle development4.30E-04
61GO:0043085: positive regulation of catalytic activity4.88E-04
62GO:0009853: photorespiration5.37E-04
63GO:0005983: starch catabolic process5.85E-04
64GO:0016120: carotene biosynthetic process6.24E-04
65GO:0016123: xanthophyll biosynthetic process6.24E-04
66GO:0032543: mitochondrial translation6.24E-04
67GO:0010236: plastoquinone biosynthetic process6.24E-04
68GO:0045038: protein import into chloroplast thylakoid membrane6.24E-04
69GO:0031365: N-terminal protein amino acid modification6.24E-04
70GO:0006094: gluconeogenesis6.93E-04
71GO:0006810: transport7.85E-04
72GO:0010020: chloroplast fission8.11E-04
73GO:0042549: photosystem II stabilization8.61E-04
74GO:0010190: cytochrome b6f complex assembly8.61E-04
75GO:0043953: protein transport by the Tat complex1.01E-03
76GO:1902458: positive regulation of stomatal opening1.01E-03
77GO:0009443: pyridoxal 5'-phosphate salvage1.01E-03
78GO:0051775: response to redox state1.01E-03
79GO:0071277: cellular response to calcium ion1.01E-03
80GO:0071588: hydrogen peroxide mediated signaling pathway1.01E-03
81GO:0043489: RNA stabilization1.01E-03
82GO:0000023: maltose metabolic process1.01E-03
83GO:0060627: regulation of vesicle-mediated transport1.01E-03
84GO:0000481: maturation of 5S rRNA1.01E-03
85GO:0080051: cutin transport1.01E-03
86GO:0033481: galacturonate biosynthetic process1.01E-03
87GO:0042371: vitamin K biosynthetic process1.01E-03
88GO:0065002: intracellular protein transmembrane transport1.01E-03
89GO:0006106: fumarate metabolic process1.01E-03
90GO:0043686: co-translational protein modification1.01E-03
91GO:0043609: regulation of carbon utilization1.01E-03
92GO:0009416: response to light stimulus1.04E-03
93GO:0045454: cell redox homeostasis1.15E-03
94GO:0061077: chaperone-mediated protein folding1.58E-03
95GO:0009704: de-etiolation1.81E-03
96GO:0008610: lipid biosynthetic process1.81E-03
97GO:0007623: circadian rhythm2.03E-03
98GO:0006729: tetrahydrobiopterin biosynthetic process2.21E-03
99GO:0034755: iron ion transmembrane transport2.21E-03
100GO:1903426: regulation of reactive oxygen species biosynthetic process2.21E-03
101GO:0043255: regulation of carbohydrate biosynthetic process2.21E-03
102GO:0009629: response to gravity2.21E-03
103GO:0080005: photosystem stoichiometry adjustment2.21E-03
104GO:0010270: photosystem II oxygen evolving complex assembly2.21E-03
105GO:0007154: cell communication2.21E-03
106GO:0009662: etioplast organization2.21E-03
107GO:0097054: L-glutamate biosynthetic process2.21E-03
108GO:1904143: positive regulation of carotenoid biosynthetic process2.21E-03
109GO:0015908: fatty acid transport2.21E-03
110GO:0006508: proteolysis2.29E-03
111GO:1900865: chloroplast RNA modification3.17E-03
112GO:0009409: response to cold3.25E-03
113GO:0019252: starch biosynthetic process3.63E-03
114GO:0010581: regulation of starch biosynthetic process3.67E-03
115GO:0006013: mannose metabolic process3.67E-03
116GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition3.67E-03
117GO:0006954: inflammatory response3.67E-03
118GO:0090506: axillary shoot meristem initiation3.67E-03
119GO:0031022: nuclear migration along microfilament3.67E-03
120GO:1902448: positive regulation of shade avoidance3.67E-03
121GO:0051604: protein maturation3.67E-03
122GO:0071492: cellular response to UV-A3.67E-03
123GO:0006696: ergosterol biosynthetic process3.67E-03
124GO:0045036: protein targeting to chloroplast3.71E-03
125GO:0006415: translational termination4.31E-03
126GO:0006352: DNA-templated transcription, initiation4.31E-03
127GO:0006869: lipid transport4.35E-03
128GO:0006537: glutamate biosynthetic process5.36E-03
129GO:0009800: cinnamic acid biosynthetic process5.36E-03
130GO:0009052: pentose-phosphate shunt, non-oxidative branch5.36E-03
131GO:0006020: inositol metabolic process5.36E-03
132GO:0016556: mRNA modification5.36E-03
133GO:0006424: glutamyl-tRNA aminoacylation5.36E-03
134GO:1901332: negative regulation of lateral root development5.36E-03
135GO:0009152: purine ribonucleotide biosynthetic process5.36E-03
136GO:0046653: tetrahydrofolate metabolic process5.36E-03
137GO:0006107: oxaloacetate metabolic process5.36E-03
138GO:0043572: plastid fission5.36E-03
139GO:2001141: regulation of RNA biosynthetic process5.36E-03
140GO:0006457: protein folding5.50E-03
141GO:0009767: photosynthetic electron transport chain5.64E-03
142GO:0005986: sucrose biosynthetic process5.64E-03
143GO:0006108: malate metabolic process5.64E-03
144GO:0006006: glucose metabolic process5.64E-03
145GO:0019253: reductive pentose-phosphate cycle6.38E-03
146GO:0090351: seedling development7.17E-03
147GO:0010222: stem vascular tissue pattern formation7.26E-03
148GO:2000122: negative regulation of stomatal complex development7.26E-03
149GO:0010109: regulation of photosynthesis7.26E-03
150GO:0044206: UMP salvage7.26E-03
151GO:0019676: ammonia assimilation cycle7.26E-03
152GO:0015976: carbon utilization7.26E-03
153GO:0071486: cellular response to high light intensity7.26E-03
154GO:0006021: inositol biosynthetic process7.26E-03
155GO:0006109: regulation of carbohydrate metabolic process7.26E-03
156GO:0071483: cellular response to blue light7.26E-03
157GO:0006734: NADH metabolic process7.26E-03
158GO:0015994: chlorophyll metabolic process7.26E-03
159GO:0010021: amylopectin biosynthetic process7.26E-03
160GO:0010037: response to carbon dioxide7.26E-03
161GO:0006808: regulation of nitrogen utilization7.26E-03
162GO:0006096: glycolytic process7.94E-03
163GO:0010025: wax biosynthetic process8.01E-03
164GO:0006636: unsaturated fatty acid biosynthetic process8.01E-03
165GO:0006461: protein complex assembly9.37E-03
166GO:0080110: sporopollenin biosynthetic process9.37E-03
167GO:0006544: glycine metabolic process9.37E-03
168GO:0006656: phosphatidylcholine biosynthetic process9.37E-03
169GO:0043097: pyrimidine nucleoside salvage9.37E-03
170GO:0006564: L-serine biosynthetic process9.37E-03
171GO:0009904: chloroplast accumulation movement9.37E-03
172GO:0007017: microtubule-based process9.85E-03
173GO:0009768: photosynthesis, light harvesting in photosystem I9.85E-03
174GO:0006418: tRNA aminoacylation for protein translation9.85E-03
175GO:0009631: cold acclimation1.09E-02
176GO:0031408: oxylipin biosynthetic process1.09E-02
177GO:0010304: PSII associated light-harvesting complex II catabolic process1.17E-02
178GO:0006559: L-phenylalanine catabolic process1.17E-02
179GO:0048827: phyllome development1.17E-02
180GO:0006206: pyrimidine nucleobase metabolic process1.17E-02
181GO:0032973: amino acid export1.17E-02
182GO:0009913: epidermal cell differentiation1.17E-02
183GO:0006655: phosphatidylglycerol biosynthetic process1.17E-02
184GO:0046855: inositol phosphate dephosphorylation1.17E-02
185GO:0006086: acetyl-CoA biosynthetic process from pyruvate1.17E-02
186GO:0010337: regulation of salicylic acid metabolic process1.17E-02
187GO:0000470: maturation of LSU-rRNA1.17E-02
188GO:0006014: D-ribose metabolic process1.17E-02
189GO:0010358: leaf shaping1.17E-02
190GO:0016554: cytidine to uridine editing1.17E-02
191GO:0006563: L-serine metabolic process1.17E-02
192GO:0006828: manganese ion transport1.17E-02
193GO:0034599: cellular response to oxidative stress1.30E-02
194GO:0055085: transmembrane transport1.31E-02
195GO:0042372: phylloquinone biosynthetic process1.42E-02
196GO:0006458: 'de novo' protein folding1.42E-02
197GO:0009955: adaxial/abaxial pattern specification1.42E-02
198GO:0009306: protein secretion1.42E-02
199GO:0009903: chloroplast avoidance movement1.42E-02
200GO:0030488: tRNA methylation1.42E-02
201GO:0010189: vitamin E biosynthetic process1.42E-02
202GO:0009854: oxidative photosynthetic carbon pathway1.42E-02
203GO:0010067: procambium histogenesis1.42E-02
204GO:0010019: chloroplast-nucleus signaling pathway1.42E-02
205GO:0042026: protein refolding1.42E-02
206GO:0009793: embryo development ending in seed dormancy1.62E-02
207GO:0000413: protein peptidyl-prolyl isomerization1.67E-02
208GO:0050829: defense response to Gram-negative bacterium1.68E-02
209GO:0009395: phospholipid catabolic process1.68E-02
210GO:0009772: photosynthetic electron transport in photosystem II1.68E-02
211GO:0009645: response to low light intensity stimulus1.68E-02
212GO:0043090: amino acid import1.68E-02
213GO:0006400: tRNA modification1.68E-02
214GO:0006614: SRP-dependent cotranslational protein targeting to membrane1.68E-02
215GO:0009741: response to brassinosteroid1.80E-02
216GO:0006662: glycerol ether metabolic process1.80E-02
217GO:0009644: response to high light intensity1.87E-02
218GO:0016559: peroxisome fission1.96E-02
219GO:0048564: photosystem I assembly1.96E-02
220GO:0006605: protein targeting1.96E-02
221GO:0032508: DNA duplex unwinding1.96E-02
222GO:2000070: regulation of response to water deprivation1.96E-02
223GO:0045010: actin nucleation1.96E-02
224GO:0010492: maintenance of shoot apical meristem identity1.96E-02
225GO:0009819: drought recovery1.96E-02
226GO:0009642: response to light intensity1.96E-02
227GO:0006855: drug transmembrane transport2.06E-02
228GO:0009791: post-embryonic development2.08E-02
229GO:0006633: fatty acid biosynthetic process2.09E-02
230GO:0005975: carbohydrate metabolic process2.19E-02
231GO:0080167: response to karrikin2.22E-02
232GO:0017004: cytochrome complex assembly2.26E-02
233GO:0019430: removal of superoxide radicals2.26E-02
234GO:0015996: chlorophyll catabolic process2.26E-02
235GO:0007186: G-protein coupled receptor signaling pathway2.26E-02
236GO:0032502: developmental process2.38E-02
237GO:0016032: viral process2.38E-02
238GO:0006364: rRNA processing2.48E-02
239GO:0010090: trichome morphogenesis2.54E-02
240GO:0048507: meristem development2.57E-02
241GO:0090305: nucleic acid phosphodiester bond hydrolysis2.57E-02
242GO:0080144: amino acid homeostasis2.57E-02
243GO:0090333: regulation of stomatal closure2.57E-02
244GO:0009051: pentose-phosphate shunt, oxidative branch2.57E-02
245GO:0000373: Group II intron splicing2.57E-02
246GO:0006098: pentose-phosphate shunt2.57E-02
247GO:0010380: regulation of chlorophyll biosynthetic process2.90E-02
248GO:0042761: very long-chain fatty acid biosynthetic process2.90E-02
249GO:0006779: porphyrin-containing compound biosynthetic process2.90E-02
250GO:0035999: tetrahydrofolate interconversion2.90E-02
251GO:0006032: chitin catabolic process3.24E-02
252GO:0006782: protoporphyrinogen IX biosynthetic process3.24E-02
253GO:0019684: photosynthesis, light reaction3.59E-02
254GO:0009089: lysine biosynthetic process via diaminopimelate3.59E-02
255GO:0009073: aromatic amino acid family biosynthetic process3.59E-02
256GO:0000038: very long-chain fatty acid metabolic process3.59E-02
257GO:0006879: cellular iron ion homeostasis3.59E-02
258GO:0000272: polysaccharide catabolic process3.59E-02
259GO:0009750: response to fructose3.59E-02
260GO:0006816: calcium ion transport3.59E-02
261GO:0018119: peptidyl-cysteine S-nitrosylation3.59E-02
262GO:0042128: nitrate assimilation3.61E-02
263GO:0042742: defense response to bacterium3.71E-02
264GO:0016024: CDP-diacylglycerol biosynthetic process3.95E-02
265GO:0045037: protein import into chloroplast stroma3.95E-02
266GO:0006790: sulfur compound metabolic process3.95E-02
267GO:0030244: cellulose biosynthetic process4.21E-02
268GO:0009817: defense response to fungus, incompatible interaction4.21E-02
269GO:0009718: anthocyanin-containing compound biosynthetic process4.33E-02
270GO:0010102: lateral root morphogenesis4.33E-02
271GO:0010628: positive regulation of gene expression4.33E-02
272GO:0010588: cotyledon vascular tissue pattern formation4.33E-02
273GO:0010229: inflorescence development4.33E-02
274GO:0030036: actin cytoskeleton organization4.33E-02
275GO:0000160: phosphorelay signal transduction system4.42E-02
276GO:0010540: basipetal auxin transport4.72E-02
277GO:0010223: secondary shoot formation4.72E-02
278GO:0046686: response to cadmium ion4.77E-02
RankGO TermAdjusted P value
1GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
2GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
3GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
4GO:0042903: tubulin deacetylase activity0.00E+00
5GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
6GO:0045435: lycopene epsilon cyclase activity0.00E+00
7GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
8GO:0004822: isoleucine-tRNA ligase activity0.00E+00
9GO:0051738: xanthophyll binding0.00E+00
10GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
11GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
12GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
13GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
14GO:0008887: glycerate kinase activity0.00E+00
15GO:0046905: phytoene synthase activity0.00E+00
16GO:0005048: signal sequence binding0.00E+00
17GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
18GO:0046608: carotenoid isomerase activity0.00E+00
19GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity0.00E+00
20GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
21GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
22GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
23GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
24GO:0043014: alpha-tubulin binding0.00E+00
25GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
26GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
27GO:0004823: leucine-tRNA ligase activity0.00E+00
28GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
29GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
30GO:0005363: maltose transmembrane transporter activity0.00E+00
31GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
32GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
33GO:0046408: chlorophyll synthetase activity0.00E+00
34GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
35GO:0051721: protein phosphatase 2A binding0.00E+00
36GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
37GO:0019843: rRNA binding2.33E-20
38GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.14E-07
39GO:0003735: structural constituent of ribosome3.34E-07
40GO:0004222: metalloendopeptidase activity4.36E-07
41GO:0004176: ATP-dependent peptidase activity8.00E-07
42GO:0016168: chlorophyll binding2.08E-06
43GO:0004033: aldo-keto reductase (NADP) activity5.07E-06
44GO:0005528: FK506 binding1.02E-05
45GO:0022891: substrate-specific transmembrane transporter activity2.65E-05
46GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity4.14E-05
47GO:0008266: poly(U) RNA binding7.97E-05
48GO:0004148: dihydrolipoyl dehydrogenase activity1.28E-04
49GO:0002161: aminoacyl-tRNA editing activity1.28E-04
50GO:0070402: NADPH binding1.28E-04
51GO:0008237: metallopeptidase activity1.60E-04
52GO:0016149: translation release factor activity, codon specific2.57E-04
53GO:0008047: enzyme activator activity4.01E-04
54GO:0001053: plastid sigma factor activity4.23E-04
55GO:0043495: protein anchor4.23E-04
56GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor4.23E-04
57GO:0016987: sigma factor activity4.23E-04
58GO:0004659: prenyltransferase activity4.23E-04
59GO:0016773: phosphotransferase activity, alcohol group as acceptor6.24E-04
60GO:0031072: heat shock protein binding6.93E-04
61GO:2001070: starch binding8.61E-04
62GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity1.01E-03
63GO:0010012: steroid 22-alpha hydroxylase activity1.01E-03
64GO:0004333: fumarate hydratase activity1.01E-03
65GO:0042586: peptide deformylase activity1.01E-03
66GO:0004856: xylulokinase activity1.01E-03
67GO:0009496: plastoquinol--plastocyanin reductase activity1.01E-03
68GO:0051996: squalene synthase activity1.01E-03
69GO:0045485: omega-6 fatty acid desaturase activity1.01E-03
70GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity1.01E-03
71GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity1.01E-03
72GO:0070006: metalloaminopeptidase activity1.01E-03
73GO:0004321: fatty-acyl-CoA synthase activity1.01E-03
74GO:0019203: carbohydrate phosphatase activity1.01E-03
75GO:0005080: protein kinase C binding1.01E-03
76GO:0008746: NAD(P)+ transhydrogenase activity1.01E-03
77GO:0015245: fatty acid transporter activity1.01E-03
78GO:0016041: glutamate synthase (ferredoxin) activity1.01E-03
79GO:0050308: sugar-phosphatase activity1.01E-03
80GO:0030941: chloroplast targeting sequence binding1.01E-03
81GO:0003867: 4-aminobutyrate transaminase activity1.01E-03
82GO:0051920: peroxiredoxin activity1.13E-03
83GO:0019899: enzyme binding1.45E-03
84GO:0016209: antioxidant activity1.81E-03
85GO:0010297: heteropolysaccharide binding2.21E-03
86GO:0004326: tetrahydrofolylpolyglutamate synthase activity2.21E-03
87GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity2.21E-03
88GO:0009977: proton motive force dependent protein transmembrane transporter activity2.21E-03
89GO:0016630: protochlorophyllide reductase activity2.21E-03
90GO:0004617: phosphoglycerate dehydrogenase activity2.21E-03
91GO:0008967: phosphoglycolate phosphatase activity2.21E-03
92GO:0004047: aminomethyltransferase activity2.21E-03
93GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase2.21E-03
94GO:0052832: inositol monophosphate 3-phosphatase activity2.21E-03
95GO:0033201: alpha-1,4-glucan synthase activity2.21E-03
96GO:0004310: farnesyl-diphosphate farnesyltransferase activity2.21E-03
97GO:0000234: phosphoethanolamine N-methyltransferase activity2.21E-03
98GO:0008805: carbon-monoxide oxygenase activity2.21E-03
99GO:0010291: carotene beta-ring hydroxylase activity2.21E-03
100GO:0008934: inositol monophosphate 1-phosphatase activity2.21E-03
101GO:0052833: inositol monophosphate 4-phosphatase activity2.21E-03
102GO:0047746: chlorophyllase activity2.21E-03
103GO:0003747: translation release factor activity2.67E-03
104GO:0051082: unfolded protein binding2.72E-03
105GO:0016491: oxidoreductase activity2.98E-03
106GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.29E-03
107GO:0004791: thioredoxin-disulfide reductase activity3.32E-03
108GO:0050662: coenzyme binding3.32E-03
109GO:0003723: RNA binding3.38E-03
110GO:0008864: formyltetrahydrofolate deformylase activity3.67E-03
111GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor3.67E-03
112GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity3.67E-03
113GO:0004751: ribose-5-phosphate isomerase activity3.67E-03
114GO:0045174: glutathione dehydrogenase (ascorbate) activity3.67E-03
115GO:0070330: aromatase activity3.67E-03
116GO:0030267: glyoxylate reductase (NADP) activity3.67E-03
117GO:0004373: glycogen (starch) synthase activity3.67E-03
118GO:0017150: tRNA dihydrouridine synthase activity3.67E-03
119GO:0045548: phenylalanine ammonia-lyase activity3.67E-03
120GO:0003913: DNA photolyase activity3.67E-03
121GO:0016742: hydroxymethyl-, formyl- and related transferase activity3.67E-03
122GO:0003824: catalytic activity4.03E-03
123GO:0005525: GTP binding4.16E-03
124GO:0004177: aminopeptidase activity4.31E-03
125GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.70E-03
126GO:0008097: 5S rRNA binding5.36E-03
127GO:0016851: magnesium chelatase activity5.36E-03
128GO:0008508: bile acid:sodium symporter activity5.36E-03
129GO:0048487: beta-tubulin binding5.36E-03
130GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity5.36E-03
131GO:0004375: glycine dehydrogenase (decarboxylating) activity5.36E-03
132GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity5.36E-03
133GO:0043023: ribosomal large subunit binding5.36E-03
134GO:0003924: GTPase activity5.62E-03
135GO:0004565: beta-galactosidase activity5.64E-03
136GO:0004845: uracil phosphoribosyltransferase activity7.26E-03
137GO:0009011: starch synthase activity7.26E-03
138GO:0004345: glucose-6-phosphate dehydrogenase activity7.26E-03
139GO:0051861: glycolipid binding7.26E-03
140GO:0050378: UDP-glucuronate 4-epimerase activity7.26E-03
141GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity7.26E-03
142GO:0004045: aminoacyl-tRNA hydrolase activity7.26E-03
143GO:1990137: plant seed peroxidase activity7.26E-03
144GO:0052793: pectin acetylesterase activity7.26E-03
145GO:0031409: pigment binding8.01E-03
146GO:0008236: serine-type peptidase activity8.45E-03
147GO:0051536: iron-sulfur cluster binding8.91E-03
148GO:0004372: glycine hydroxymethyltransferase activity9.37E-03
149GO:0004040: amidase activity9.37E-03
150GO:0003959: NADPH dehydrogenase activity9.37E-03
151GO:0018685: alkane 1-monooxygenase activity9.37E-03
152GO:0051538: 3 iron, 4 sulfur cluster binding9.37E-03
153GO:0015079: potassium ion transmembrane transporter activity9.85E-03
154GO:0043424: protein histidine kinase binding9.85E-03
155GO:0042578: phosphoric ester hydrolase activity1.17E-02
156GO:0004605: phosphatidate cytidylyltransferase activity1.17E-02
157GO:0046872: metal ion binding1.17E-02
158GO:0004332: fructose-bisphosphate aldolase activity1.17E-02
159GO:0016688: L-ascorbate peroxidase activity1.17E-02
160GO:0016615: malate dehydrogenase activity1.17E-02
161GO:0004130: cytochrome-c peroxidase activity1.17E-02
162GO:0016787: hydrolase activity1.29E-02
163GO:0005509: calcium ion binding1.38E-02
164GO:0004747: ribokinase activity1.42E-02
165GO:0030060: L-malate dehydrogenase activity1.42E-02
166GO:0004849: uridine kinase activity1.42E-02
167GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.42E-02
168GO:0004723: calcium-dependent protein serine/threonine phosphatase activity1.42E-02
169GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.42E-02
170GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.42E-02
171GO:0004559: alpha-mannosidase activity1.42E-02
172GO:0004812: aminoacyl-tRNA ligase activity1.54E-02
173GO:0047134: protein-disulfide reductase activity1.54E-02
174GO:0004364: glutathione transferase activity1.61E-02
175GO:0008235: metalloexopeptidase activity1.68E-02
176GO:0004620: phospholipase activity1.68E-02
177GO:0009881: photoreceptor activity1.68E-02
178GO:0009055: electron carrier activity1.82E-02
179GO:0051537: 2 iron, 2 sulfur cluster binding1.87E-02
180GO:0008865: fructokinase activity1.96E-02
181GO:0052747: sinapyl alcohol dehydrogenase activity1.96E-02
182GO:0043022: ribosome binding1.96E-02
183GO:0008312: 7S RNA binding1.96E-02
184GO:0048038: quinone binding2.23E-02
185GO:0015078: hydrogen ion transmembrane transporter activity2.26E-02
186GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water2.26E-02
187GO:0008135: translation factor activity, RNA binding2.26E-02
188GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)2.26E-02
189GO:0005515: protein binding2.33E-02
190GO:0004518: nuclease activity2.38E-02
191GO:0000156: phosphorelay response regulator activity2.54E-02
192GO:0008138: protein tyrosine/serine/threonine phosphatase activity2.57E-02
193GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors2.57E-02
194GO:0016207: 4-coumarate-CoA ligase activity2.57E-02
195GO:0005384: manganese ion transmembrane transporter activity2.90E-02
196GO:0005381: iron ion transmembrane transporter activity2.90E-02
197GO:0008289: lipid binding2.97E-02
198GO:0030234: enzyme regulator activity3.24E-02
199GO:0004568: chitinase activity3.24E-02
200GO:0042802: identical protein binding3.43E-02
201GO:0016874: ligase activity3.57E-02
202GO:0044183: protein binding involved in protein folding3.59E-02
203GO:0005089: Rho guanyl-nucleotide exchange factor activity3.59E-02
204GO:0047372: acylglycerol lipase activity3.59E-02
205GO:0015386: potassium:proton antiporter activity3.59E-02
206GO:0016887: ATPase activity3.63E-02
207GO:0000049: tRNA binding3.95E-02
208GO:0045551: cinnamyl-alcohol dehydrogenase activity3.95E-02
209GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.21E-02
210GO:0003729: mRNA binding4.30E-02
211GO:0004089: carbonate dehydratase activity4.33E-02
212GO:0015095: magnesium ion transmembrane transporter activity4.33E-02
213GO:0009982: pseudouridine synthase activity4.33E-02
214GO:0004022: alcohol dehydrogenase (NAD) activity4.33E-02
215GO:0015238: drug transmembrane transporter activity4.42E-02
216GO:0004601: peroxidase activity4.57E-02
217GO:0016788: hydrolase activity, acting on ester bonds4.69E-02
218GO:0042973: glucan endo-1,3-beta-D-glucosidase activity4.72E-02
RankGO TermAdjusted P value
1GO:0000408: EKC/KEOPS complex0.00E+00
2GO:0009571: proplastid stroma0.00E+00
3GO:0043235: receptor complex0.00E+00
4GO:0009515: granal stacked thylakoid0.00E+00
5GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
6GO:0009575: chromoplast stroma0.00E+00
7GO:0009507: chloroplast4.98E-153
8GO:0009535: chloroplast thylakoid membrane4.86E-70
9GO:0009570: chloroplast stroma1.69E-67
10GO:0009941: chloroplast envelope1.03E-66
11GO:0009534: chloroplast thylakoid5.17E-43
12GO:0009579: thylakoid1.54E-36
13GO:0009543: chloroplast thylakoid lumen3.39E-26
14GO:0031977: thylakoid lumen1.00E-15
15GO:0031969: chloroplast membrane1.32E-13
16GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)5.06E-13
17GO:0005840: ribosome5.91E-13
18GO:0009654: photosystem II oxygen evolving complex4.85E-10
19GO:0048046: apoplast2.27E-07
20GO:0019898: extrinsic component of membrane3.37E-07
21GO:0009523: photosystem II3.37E-07
22GO:0010287: plastoglobule5.78E-07
23GO:0042651: thylakoid membrane1.32E-05
24GO:0030095: chloroplast photosystem II7.97E-05
25GO:0009533: chloroplast stromal thylakoid1.01E-04
26GO:0009536: plastid1.51E-04
27GO:0016021: integral component of membrane2.96E-04
28GO:0000311: plastid large ribosomal subunit5.85E-04
29GO:0009706: chloroplast inner membrane6.77E-04
30GO:0016020: membrane8.15E-04
31GO:0010319: stromule1.00E-03
32GO:0009547: plastid ribosome1.01E-03
33GO:0045239: tricarboxylic acid cycle enzyme complex1.01E-03
34GO:0031361: integral component of thylakoid membrane1.01E-03
35GO:0009782: photosystem I antenna complex1.01E-03
36GO:0009344: nitrite reductase complex [NAD(P)H]1.01E-03
37GO:0009532: plastid stroma1.58E-03
38GO:0080085: signal recognition particle, chloroplast targeting2.21E-03
39GO:0000427: plastid-encoded plastid RNA polymerase complex2.21E-03
40GO:0015934: large ribosomal subunit2.27E-03
41GO:0009897: external side of plasma membrane3.67E-03
42GO:0033281: TAT protein transport complex3.67E-03
43GO:0009528: plastid inner membrane3.67E-03
44GO:0010007: magnesium chelatase complex3.67E-03
45GO:0032040: small-subunit processome4.95E-03
46GO:0015630: microtubule cytoskeleton5.36E-03
47GO:0005960: glycine cleavage complex5.36E-03
48GO:0030529: intracellular ribonucleoprotein complex6.40E-03
49GO:0030076: light-harvesting complex7.17E-03
50GO:0009526: plastid envelope7.26E-03
51GO:0009527: plastid outer membrane7.26E-03
52GO:0030286: dynein complex7.26E-03
53GO:0009517: PSII associated light-harvesting complex II7.26E-03
54GO:0009707: chloroplast outer membrane9.02E-03
55GO:0055035: plastid thylakoid membrane9.37E-03
56GO:0009512: cytochrome b6f complex9.37E-03
57GO:0046658: anchored component of plasma membrane1.17E-02
58GO:0031209: SCAR complex1.17E-02
59GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)1.17E-02
60GO:0031359: integral component of chloroplast outer membrane1.68E-02
61GO:0009501: amyloplast1.96E-02
62GO:0005759: mitochondrial matrix2.09E-02
63GO:0009539: photosystem II reaction center2.26E-02
64GO:0005786: signal recognition particle, endoplasmic reticulum targeting2.26E-02
65GO:0005811: lipid particle2.26E-02
66GO:0005763: mitochondrial small ribosomal subunit2.57E-02
67GO:0009505: plant-type cell wall2.89E-02
68GO:0016324: apical plasma membrane3.24E-02
69GO:0022626: cytosolic ribosome4.28E-02
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Gene type



Gene DE type