GO Enrichment Analysis of Co-expressed Genes with
AT3G53800
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0042425: choline biosynthetic process | 0.00E+00 |
| 3 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 4 | GO:0010206: photosystem II repair | 2.98E-05 |
| 5 | GO:0000476: maturation of 4.5S rRNA | 4.88E-05 |
| 6 | GO:0000967: rRNA 5'-end processing | 4.88E-05 |
| 7 | GO:0010480: microsporocyte differentiation | 4.88E-05 |
| 8 | GO:0010028: xanthophyll cycle | 4.88E-05 |
| 9 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 4.88E-05 |
| 10 | GO:0006824: cobalt ion transport | 4.88E-05 |
| 11 | GO:0019684: photosynthesis, light reaction | 5.27E-05 |
| 12 | GO:0010207: photosystem II assembly | 8.25E-05 |
| 13 | GO:0035304: regulation of protein dephosphorylation | 1.20E-04 |
| 14 | GO:0018026: peptidyl-lysine monomethylation | 1.20E-04 |
| 15 | GO:0090342: regulation of cell aging | 1.20E-04 |
| 16 | GO:0016122: xanthophyll metabolic process | 1.20E-04 |
| 17 | GO:0006521: regulation of cellular amino acid metabolic process | 1.20E-04 |
| 18 | GO:0034470: ncRNA processing | 1.20E-04 |
| 19 | GO:0034755: iron ion transmembrane transport | 1.20E-04 |
| 20 | GO:0010306: rhamnogalacturonan II biosynthetic process | 3.01E-04 |
| 21 | GO:0051513: regulation of monopolar cell growth | 3.01E-04 |
| 22 | GO:0042938: dipeptide transport | 4.04E-04 |
| 23 | GO:0015994: chlorophyll metabolic process | 4.04E-04 |
| 24 | GO:0051205: protein insertion into membrane | 4.04E-04 |
| 25 | GO:0045038: protein import into chloroplast thylakoid membrane | 5.13E-04 |
| 26 | GO:0006656: phosphatidylcholine biosynthetic process | 5.13E-04 |
| 27 | GO:0009913: epidermal cell differentiation | 6.29E-04 |
| 28 | GO:0006655: phosphatidylglycerol biosynthetic process | 6.29E-04 |
| 29 | GO:0042549: photosystem II stabilization | 6.29E-04 |
| 30 | GO:0009942: longitudinal axis specification | 7.50E-04 |
| 31 | GO:0048528: post-embryonic root development | 8.75E-04 |
| 32 | GO:0080186: developmental vegetative growth | 8.75E-04 |
| 33 | GO:0048437: floral organ development | 8.75E-04 |
| 34 | GO:0005978: glycogen biosynthetic process | 1.01E-03 |
| 35 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.01E-03 |
| 36 | GO:0006353: DNA-templated transcription, termination | 1.01E-03 |
| 37 | GO:0007389: pattern specification process | 1.14E-03 |
| 38 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.43E-03 |
| 39 | GO:0010205: photoinhibition | 1.43E-03 |
| 40 | GO:0009638: phototropism | 1.43E-03 |
| 41 | GO:0048229: gametophyte development | 1.75E-03 |
| 42 | GO:0015706: nitrate transport | 1.91E-03 |
| 43 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.91E-03 |
| 44 | GO:0010075: regulation of meristem growth | 2.08E-03 |
| 45 | GO:0009785: blue light signaling pathway | 2.08E-03 |
| 46 | GO:0009934: regulation of meristem structural organization | 2.26E-03 |
| 47 | GO:0010030: positive regulation of seed germination | 2.44E-03 |
| 48 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.62E-03 |
| 49 | GO:0007017: microtubule-based process | 3.01E-03 |
| 50 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 4.04E-03 |
| 51 | GO:0048653: anther development | 4.26E-03 |
| 52 | GO:0042631: cellular response to water deprivation | 4.26E-03 |
| 53 | GO:0048868: pollen tube development | 4.48E-03 |
| 54 | GO:0009860: pollen tube growth | 4.90E-03 |
| 55 | GO:0048825: cotyledon development | 4.94E-03 |
| 56 | GO:0019252: starch biosynthetic process | 4.94E-03 |
| 57 | GO:0008654: phospholipid biosynthetic process | 4.94E-03 |
| 58 | GO:0010183: pollen tube guidance | 4.94E-03 |
| 59 | GO:0000302: response to reactive oxygen species | 5.18E-03 |
| 60 | GO:0010193: response to ozone | 5.18E-03 |
| 61 | GO:0010583: response to cyclopentenone | 5.42E-03 |
| 62 | GO:1901657: glycosyl compound metabolic process | 5.66E-03 |
| 63 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 5.83E-03 |
| 64 | GO:0010252: auxin homeostasis | 5.91E-03 |
| 65 | GO:0010027: thylakoid membrane organization | 6.67E-03 |
| 66 | GO:0016311: dephosphorylation | 7.75E-03 |
| 67 | GO:0000160: phosphorelay signal transduction system | 8.31E-03 |
| 68 | GO:0007568: aging | 8.88E-03 |
| 69 | GO:0016051: carbohydrate biosynthetic process | 9.47E-03 |
| 70 | GO:0034599: cellular response to oxidative stress | 9.77E-03 |
| 71 | GO:0006631: fatty acid metabolic process | 1.07E-02 |
| 72 | GO:0009926: auxin polar transport | 1.13E-02 |
| 73 | GO:0009735: response to cytokinin | 1.35E-02 |
| 74 | GO:0009736: cytokinin-activated signaling pathway | 1.40E-02 |
| 75 | GO:0010224: response to UV-B | 1.43E-02 |
| 76 | GO:0006857: oligopeptide transport | 1.47E-02 |
| 77 | GO:0009845: seed germination | 2.23E-02 |
| 78 | GO:0042744: hydrogen peroxide catabolic process | 2.31E-02 |
| 79 | GO:0006468: protein phosphorylation | 2.41E-02 |
| 80 | GO:0007166: cell surface receptor signaling pathway | 2.91E-02 |
| 81 | GO:0042742: defense response to bacterium | 3.00E-02 |
| 82 | GO:0009826: unidimensional cell growth | 3.52E-02 |
| 83 | GO:0046777: protein autophosphorylation | 4.41E-02 |
| 84 | GO:0005975: carbohydrate metabolic process | 4.54E-02 |
| 85 | GO:0015979: photosynthesis | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 4.88E-05 |
| 3 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 4.88E-05 |
| 4 | GO:0010242: oxygen evolving activity | 4.88E-05 |
| 5 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 4.88E-05 |
| 6 | GO:0008266: poly(U) RNA binding | 8.25E-05 |
| 7 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.20E-04 |
| 8 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.20E-04 |
| 9 | GO:0009011: starch synthase activity | 4.04E-04 |
| 10 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 4.04E-04 |
| 11 | GO:0016279: protein-lysine N-methyltransferase activity | 4.04E-04 |
| 12 | GO:0042936: dipeptide transporter activity | 4.04E-04 |
| 13 | GO:0004605: phosphatidate cytidylyltransferase activity | 6.29E-04 |
| 14 | GO:0004130: cytochrome-c peroxidase activity | 6.29E-04 |
| 15 | GO:0004602: glutathione peroxidase activity | 7.50E-04 |
| 16 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.14E-03 |
| 17 | GO:0009672: auxin:proton symporter activity | 1.43E-03 |
| 18 | GO:0005381: iron ion transmembrane transporter activity | 1.43E-03 |
| 19 | GO:0015020: glucuronosyltransferase activity | 1.59E-03 |
| 20 | GO:0047372: acylglycerol lipase activity | 1.75E-03 |
| 21 | GO:0031072: heat shock protein binding | 2.08E-03 |
| 22 | GO:0010329: auxin efflux transmembrane transporter activity | 2.08E-03 |
| 23 | GO:0005515: protein binding | 2.57E-03 |
| 24 | GO:0033612: receptor serine/threonine kinase binding | 3.20E-03 |
| 25 | GO:0003756: protein disulfide isomerase activity | 3.82E-03 |
| 26 | GO:0019901: protein kinase binding | 4.94E-03 |
| 27 | GO:0000156: phosphorelay response regulator activity | 5.66E-03 |
| 28 | GO:0005200: structural constituent of cytoskeleton | 6.16E-03 |
| 29 | GO:0016597: amino acid binding | 6.42E-03 |
| 30 | GO:0005215: transporter activity | 6.68E-03 |
| 31 | GO:0008375: acetylglucosaminyltransferase activity | 7.20E-03 |
| 32 | GO:0102483: scopolin beta-glucosidase activity | 7.48E-03 |
| 33 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.03E-03 |
| 34 | GO:0003993: acid phosphatase activity | 9.77E-03 |
| 35 | GO:0008422: beta-glucosidase activity | 1.01E-02 |
| 36 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.01E-02 |
| 37 | GO:0008289: lipid binding | 1.16E-02 |
| 38 | GO:0051082: unfolded protein binding | 1.79E-02 |
| 39 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.52E-02 |
| 40 | GO:0005509: calcium ion binding | 2.77E-02 |
| 41 | GO:0003743: translation initiation factor activity | 2.96E-02 |
| 42 | GO:0008168: methyltransferase activity | 3.52E-02 |
| 43 | GO:0004601: peroxidase activity | 3.61E-02 |
| 44 | GO:0016788: hydrolase activity, acting on ester bonds | 3.66E-02 |
| 45 | GO:0016491: oxidoreductase activity | 3.94E-02 |
| 46 | GO:0004674: protein serine/threonine kinase activity | 4.37E-02 |
| 47 | GO:0004672: protein kinase activity | 4.39E-02 |
| 48 | GO:0052689: carboxylic ester hydrolase activity | 4.52E-02 |
| 49 | GO:0042803: protein homodimerization activity | 4.94E-02 |
| 50 | GO:0004871: signal transducer activity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 1.06E-19 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.71E-15 |
| 4 | GO:0009507: chloroplast | 1.77E-11 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 1.18E-10 |
| 6 | GO:0031977: thylakoid lumen | 2.94E-10 |
| 7 | GO:0030095: chloroplast photosystem II | 6.52E-09 |
| 8 | GO:0009579: thylakoid | 4.72E-06 |
| 9 | GO:0009570: chloroplast stroma | 7.42E-05 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 1.33E-04 |
| 11 | GO:0019898: extrinsic component of membrane | 2.90E-04 |
| 12 | GO:0042646: plastid nucleoid | 3.01E-04 |
| 13 | GO:0055035: plastid thylakoid membrane | 5.13E-04 |
| 14 | GO:0009941: chloroplast envelope | 7.41E-04 |
| 15 | GO:0016363: nuclear matrix | 7.50E-04 |
| 16 | GO:0009538: photosystem I reaction center | 1.01E-03 |
| 17 | GO:0045298: tubulin complex | 1.28E-03 |
| 18 | GO:0016021: integral component of membrane | 1.67E-03 |
| 19 | GO:0010287: plastoglobule | 2.04E-03 |
| 20 | GO:0016020: membrane | 3.34E-02 |
| 21 | GO:0005874: microtubule | 4.11E-02 |
| 22 | GO:0005789: endoplasmic reticulum membrane | 4.56E-02 |