GO Enrichment Analysis of Co-expressed Genes with
AT3G53020
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 2 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 3 | GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation | 0.00E+00 |
| 4 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 5 | GO:0006042: glucosamine biosynthetic process | 0.00E+00 |
| 6 | GO:1901137: carbohydrate derivative biosynthetic process | 0.00E+00 |
| 7 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 8 | GO:0034050: host programmed cell death induced by symbiont | 0.00E+00 |
| 9 | GO:0070212: protein poly-ADP-ribosylation | 0.00E+00 |
| 10 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 11 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 12 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 13 | GO:0006457: protein folding | 3.73E-12 |
| 14 | GO:0006412: translation | 1.88E-10 |
| 15 | GO:0046686: response to cadmium ion | 1.23E-07 |
| 16 | GO:0034976: response to endoplasmic reticulum stress | 2.53E-07 |
| 17 | GO:0010197: polar nucleus fusion | 1.63E-06 |
| 18 | GO:0009651: response to salt stress | 4.94E-06 |
| 19 | GO:0009553: embryo sac development | 5.78E-06 |
| 20 | GO:0006626: protein targeting to mitochondrion | 8.79E-06 |
| 21 | GO:0000027: ribosomal large subunit assembly | 1.91E-05 |
| 22 | GO:0031167: rRNA methylation | 2.48E-05 |
| 23 | GO:0006364: rRNA processing | 5.14E-05 |
| 24 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 5.23E-05 |
| 25 | GO:0042254: ribosome biogenesis | 6.71E-05 |
| 26 | GO:0001510: RNA methylation | 1.14E-04 |
| 27 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.14E-04 |
| 28 | GO:2000232: regulation of rRNA processing | 1.35E-04 |
| 29 | GO:0031120: snRNA pseudouridine synthesis | 1.35E-04 |
| 30 | GO:0031118: rRNA pseudouridine synthesis | 1.35E-04 |
| 31 | GO:0006430: lysyl-tRNA aminoacylation | 1.35E-04 |
| 32 | GO:0010162: seed dormancy process | 2.00E-04 |
| 33 | GO:0006820: anion transport | 2.70E-04 |
| 34 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.11E-04 |
| 35 | GO:0015865: purine nucleotide transport | 3.11E-04 |
| 36 | GO:0045905: positive regulation of translational termination | 3.11E-04 |
| 37 | GO:0031204: posttranslational protein targeting to membrane, translocation | 3.11E-04 |
| 38 | GO:0045901: positive regulation of translational elongation | 3.11E-04 |
| 39 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 3.11E-04 |
| 40 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 3.11E-04 |
| 41 | GO:0045041: protein import into mitochondrial intermembrane space | 3.11E-04 |
| 42 | GO:0006452: translational frameshifting | 3.11E-04 |
| 43 | GO:0009617: response to bacterium | 3.39E-04 |
| 44 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.84E-04 |
| 45 | GO:0010581: regulation of starch biosynthetic process | 5.13E-04 |
| 46 | GO:0008652: cellular amino acid biosynthetic process | 5.13E-04 |
| 47 | GO:0006954: inflammatory response | 5.13E-04 |
| 48 | GO:0055074: calcium ion homeostasis | 5.13E-04 |
| 49 | GO:0002181: cytoplasmic translation | 5.13E-04 |
| 50 | GO:0045039: protein import into mitochondrial inner membrane | 5.13E-04 |
| 51 | GO:0007005: mitochondrion organization | 6.38E-04 |
| 52 | GO:0009294: DNA mediated transformation | 6.94E-04 |
| 53 | GO:0006165: nucleoside diphosphate phosphorylation | 7.34E-04 |
| 54 | GO:0006228: UTP biosynthetic process | 7.34E-04 |
| 55 | GO:0009855: determination of bilateral symmetry | 7.34E-04 |
| 56 | GO:0007004: telomere maintenance via telomerase | 7.34E-04 |
| 57 | GO:0070301: cellular response to hydrogen peroxide | 7.34E-04 |
| 58 | GO:0006241: CTP biosynthetic process | 7.34E-04 |
| 59 | GO:0046902: regulation of mitochondrial membrane permeability | 7.34E-04 |
| 60 | GO:0072334: UDP-galactose transmembrane transport | 7.34E-04 |
| 61 | GO:0008033: tRNA processing | 8.75E-04 |
| 62 | GO:0006183: GTP biosynthetic process | 9.73E-04 |
| 63 | GO:0042273: ribosomal large subunit biogenesis | 9.73E-04 |
| 64 | GO:0032502: developmental process | 1.22E-03 |
| 65 | GO:0031365: N-terminal protein amino acid modification | 1.23E-03 |
| 66 | GO:0006465: signal peptide processing | 1.23E-03 |
| 67 | GO:0071493: cellular response to UV-B | 1.23E-03 |
| 68 | GO:0009567: double fertilization forming a zygote and endosperm | 1.38E-03 |
| 69 | GO:0000741: karyogamy | 1.51E-03 |
| 70 | GO:0042026: protein refolding | 1.81E-03 |
| 71 | GO:0009423: chorismate biosynthetic process | 1.81E-03 |
| 72 | GO:0006458: 'de novo' protein folding | 1.81E-03 |
| 73 | GO:0009955: adaxial/abaxial pattern specification | 1.81E-03 |
| 74 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 2.12E-03 |
| 75 | GO:0080186: developmental vegetative growth | 2.12E-03 |
| 76 | GO:0001522: pseudouridine synthesis | 2.46E-03 |
| 77 | GO:0006605: protein targeting | 2.46E-03 |
| 78 | GO:0009793: embryo development ending in seed dormancy | 2.84E-03 |
| 79 | GO:0009555: pollen development | 3.02E-03 |
| 80 | GO:0006379: mRNA cleavage | 3.17E-03 |
| 81 | GO:0006189: 'de novo' IMP biosynthetic process | 3.17E-03 |
| 82 | GO:0015780: nucleotide-sugar transport | 3.17E-03 |
| 83 | GO:0098656: anion transmembrane transport | 3.17E-03 |
| 84 | GO:0007338: single fertilization | 3.17E-03 |
| 85 | GO:0016573: histone acetylation | 3.55E-03 |
| 86 | GO:0010205: photoinhibition | 3.55E-03 |
| 87 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.95E-03 |
| 88 | GO:0006032: chitin catabolic process | 3.95E-03 |
| 89 | GO:0072593: reactive oxygen species metabolic process | 4.36E-03 |
| 90 | GO:0009073: aromatic amino acid family biosynthetic process | 4.36E-03 |
| 91 | GO:0016485: protein processing | 4.36E-03 |
| 92 | GO:0012501: programmed cell death | 4.79E-03 |
| 93 | GO:0045454: cell redox homeostasis | 5.04E-03 |
| 94 | GO:0010075: regulation of meristem growth | 5.22E-03 |
| 95 | GO:0002237: response to molecule of bacterial origin | 5.68E-03 |
| 96 | GO:0009934: regulation of meristem structural organization | 5.68E-03 |
| 97 | GO:0009626: plant-type hypersensitive response | 5.86E-03 |
| 98 | GO:0080188: RNA-directed DNA methylation | 6.14E-03 |
| 99 | GO:0009408: response to heat | 6.58E-03 |
| 100 | GO:0009863: salicylic acid mediated signaling pathway | 7.11E-03 |
| 101 | GO:0030150: protein import into mitochondrial matrix | 7.11E-03 |
| 102 | GO:0016998: cell wall macromolecule catabolic process | 8.14E-03 |
| 103 | GO:0006334: nucleosome assembly | 8.14E-03 |
| 104 | GO:0061077: chaperone-mediated protein folding | 8.14E-03 |
| 105 | GO:0030433: ubiquitin-dependent ERAD pathway | 8.67E-03 |
| 106 | GO:0006979: response to oxidative stress | 8.91E-03 |
| 107 | GO:0009411: response to UV | 9.21E-03 |
| 108 | GO:0009306: protein secretion | 9.77E-03 |
| 109 | GO:0006413: translational initiation | 1.07E-02 |
| 110 | GO:0000413: protein peptidyl-prolyl isomerization | 1.09E-02 |
| 111 | GO:0048868: pollen tube development | 1.15E-02 |
| 112 | GO:0009960: endosperm development | 1.15E-02 |
| 113 | GO:0015986: ATP synthesis coupled proton transport | 1.21E-02 |
| 114 | GO:0015031: protein transport | 1.27E-02 |
| 115 | GO:0010193: response to ozone | 1.34E-02 |
| 116 | GO:0006635: fatty acid beta-oxidation | 1.34E-02 |
| 117 | GO:0001666: response to hypoxia | 1.73E-02 |
| 118 | GO:0009615: response to virus | 1.73E-02 |
| 119 | GO:0006906: vesicle fusion | 1.88E-02 |
| 120 | GO:0016049: cell growth | 2.02E-02 |
| 121 | GO:0008219: cell death | 2.09E-02 |
| 122 | GO:0006811: ion transport | 2.24E-02 |
| 123 | GO:0048527: lateral root development | 2.32E-02 |
| 124 | GO:0006839: mitochondrial transport | 2.72E-02 |
| 125 | GO:0006887: exocytosis | 2.80E-02 |
| 126 | GO:0008283: cell proliferation | 2.97E-02 |
| 127 | GO:0009644: response to high light intensity | 3.14E-02 |
| 128 | GO:0000154: rRNA modification | 3.23E-02 |
| 129 | GO:0042742: defense response to bacterium | 3.31E-02 |
| 130 | GO:0048364: root development | 3.40E-02 |
| 131 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.40E-02 |
| 132 | GO:0006486: protein glycosylation | 3.67E-02 |
| 133 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.76E-02 |
| 134 | GO:0010224: response to UV-B | 3.76E-02 |
| 135 | GO:0009909: regulation of flower development | 3.95E-02 |
| 136 | GO:0048367: shoot system development | 4.23E-02 |
| 137 | GO:0016569: covalent chromatin modification | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 2 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 3 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity | 0.00E+00 |
| 5 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 6 | GO:0003735: structural constituent of ribosome | 2.43E-11 |
| 7 | GO:0051082: unfolded protein binding | 2.16E-10 |
| 8 | GO:0030515: snoRNA binding | 3.47E-09 |
| 9 | GO:0003746: translation elongation factor activity | 5.72E-07 |
| 10 | GO:0008649: rRNA methyltransferase activity | 3.44E-06 |
| 11 | GO:0005460: UDP-glucose transmembrane transporter activity | 8.07E-06 |
| 12 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.05E-05 |
| 13 | GO:0005459: UDP-galactose transmembrane transporter activity | 2.48E-05 |
| 14 | GO:0003756: protein disulfide isomerase activity | 4.05E-05 |
| 15 | GO:0015288: porin activity | 9.09E-05 |
| 16 | GO:0008308: voltage-gated anion channel activity | 1.14E-04 |
| 17 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 1.35E-04 |
| 18 | GO:0004824: lysine-tRNA ligase activity | 1.35E-04 |
| 19 | GO:0097367: carbohydrate derivative binding | 1.35E-04 |
| 20 | GO:0080042: ADP-glucose pyrophosphohydrolase activity | 1.35E-04 |
| 21 | GO:0003723: RNA binding | 1.53E-04 |
| 22 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 3.11E-04 |
| 23 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 3.11E-04 |
| 24 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 3.11E-04 |
| 25 | GO:0080041: ADP-ribose pyrophosphohydrolase activity | 3.11E-04 |
| 26 | GO:0070034: telomerase RNA binding | 3.11E-04 |
| 27 | GO:0017110: nucleoside-diphosphatase activity | 3.11E-04 |
| 28 | GO:0004407: histone deacetylase activity | 4.84E-04 |
| 29 | GO:0070180: large ribosomal subunit rRNA binding | 5.13E-04 |
| 30 | GO:0008469: histone-arginine N-methyltransferase activity | 5.13E-04 |
| 31 | GO:0000030: mannosyltransferase activity | 5.13E-04 |
| 32 | GO:0004550: nucleoside diphosphate kinase activity | 7.34E-04 |
| 33 | GO:0019201: nucleotide kinase activity | 7.34E-04 |
| 34 | GO:0005086: ARF guanyl-nucleotide exchange factor activity | 9.73E-04 |
| 35 | GO:0019843: rRNA binding | 1.18E-03 |
| 36 | GO:0005507: copper ion binding | 1.20E-03 |
| 37 | GO:0047631: ADP-ribose diphosphatase activity | 1.23E-03 |
| 38 | GO:0005471: ATP:ADP antiporter activity | 1.23E-03 |
| 39 | GO:0000210: NAD+ diphosphatase activity | 1.51E-03 |
| 40 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.51E-03 |
| 41 | GO:0004017: adenylate kinase activity | 1.81E-03 |
| 42 | GO:0008235: metalloexopeptidase activity | 2.12E-03 |
| 43 | GO:0043022: ribosome binding | 2.46E-03 |
| 44 | GO:0001055: RNA polymerase II activity | 3.55E-03 |
| 45 | GO:0004568: chitinase activity | 3.95E-03 |
| 46 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.04E-03 |
| 47 | GO:0001054: RNA polymerase I activity | 4.36E-03 |
| 48 | GO:0004177: aminopeptidase activity | 4.36E-03 |
| 49 | GO:0044183: protein binding involved in protein folding | 4.36E-03 |
| 50 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.66E-03 |
| 51 | GO:0001056: RNA polymerase III activity | 4.79E-03 |
| 52 | GO:0015266: protein channel activity | 5.22E-03 |
| 53 | GO:0031072: heat shock protein binding | 5.22E-03 |
| 54 | GO:0015114: phosphate ion transmembrane transporter activity | 5.22E-03 |
| 55 | GO:0008266: poly(U) RNA binding | 5.68E-03 |
| 56 | GO:0046872: metal ion binding | 7.00E-03 |
| 57 | GO:0005528: FK506 binding | 7.11E-03 |
| 58 | GO:0004298: threonine-type endopeptidase activity | 8.14E-03 |
| 59 | GO:0008565: protein transporter activity | 9.93E-03 |
| 60 | GO:0005524: ATP binding | 1.07E-02 |
| 61 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.15E-02 |
| 62 | GO:0003713: transcription coactivator activity | 1.15E-02 |
| 63 | GO:0016887: ATPase activity | 1.15E-02 |
| 64 | GO:0010181: FMN binding | 1.21E-02 |
| 65 | GO:0016853: isomerase activity | 1.21E-02 |
| 66 | GO:0003743: translation initiation factor activity | 1.34E-02 |
| 67 | GO:0008483: transaminase activity | 1.60E-02 |
| 68 | GO:0030246: carbohydrate binding | 1.99E-02 |
| 69 | GO:0008233: peptidase activity | 2.17E-02 |
| 70 | GO:0004222: metalloendopeptidase activity | 2.24E-02 |
| 71 | GO:0050897: cobalt ion binding | 2.32E-02 |
| 72 | GO:0000149: SNARE binding | 2.64E-02 |
| 73 | GO:0042393: histone binding | 2.72E-02 |
| 74 | GO:0005484: SNAP receptor activity | 2.97E-02 |
| 75 | GO:0005509: calcium ion binding | 2.99E-02 |
| 76 | GO:0003924: GTPase activity | 3.26E-02 |
| 77 | GO:0051287: NAD binding | 3.40E-02 |
| 78 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.42E-02 |
| 79 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031205: endoplasmic reticulum Sec complex | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 4 | GO:0005784: Sec61 translocon complex | 0.00E+00 |
| 5 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 6 | GO:0005730: nucleolus | 4.07E-22 |
| 7 | GO:0005774: vacuolar membrane | 9.02E-19 |
| 8 | GO:0005788: endoplasmic reticulum lumen | 4.77E-11 |
| 9 | GO:0022625: cytosolic large ribosomal subunit | 6.42E-11 |
| 10 | GO:0005783: endoplasmic reticulum | 1.86E-10 |
| 11 | GO:0005773: vacuole | 2.16E-10 |
| 12 | GO:0005840: ribosome | 1.20E-09 |
| 13 | GO:0005829: cytosol | 1.66E-07 |
| 14 | GO:0031428: box C/D snoRNP complex | 2.45E-07 |
| 15 | GO:0009506: plasmodesma | 9.17E-07 |
| 16 | GO:0022626: cytosolic ribosome | 1.09E-06 |
| 17 | GO:0015030: Cajal body | 3.14E-06 |
| 18 | GO:0032040: small-subunit processome | 6.99E-06 |
| 19 | GO:0005739: mitochondrion | 8.88E-06 |
| 20 | GO:0005618: cell wall | 1.04E-05 |
| 21 | GO:0005758: mitochondrial intermembrane space | 1.91E-05 |
| 22 | GO:0005741: mitochondrial outer membrane | 2.64E-05 |
| 23 | GO:0022627: cytosolic small ribosomal subunit | 4.55E-05 |
| 24 | GO:0005747: mitochondrial respiratory chain complex I | 7.48E-05 |
| 25 | GO:0046930: pore complex | 1.14E-04 |
| 26 | GO:0005886: plasma membrane | 1.59E-04 |
| 27 | GO:0005743: mitochondrial inner membrane | 1.95E-04 |
| 28 | GO:0000418: DNA-directed RNA polymerase IV complex | 2.00E-04 |
| 29 | GO:0005740: mitochondrial envelope | 2.00E-04 |
| 30 | GO:0015934: large ribosomal subunit | 2.48E-04 |
| 31 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.70E-04 |
| 32 | GO:0009507: chloroplast | 2.76E-04 |
| 33 | GO:0035267: NuA4 histone acetyltransferase complex | 3.11E-04 |
| 34 | GO:0070545: PeBoW complex | 3.11E-04 |
| 35 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.91E-04 |
| 36 | GO:0031429: box H/ACA snoRNP complex | 7.34E-04 |
| 37 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 9.73E-04 |
| 38 | GO:0016592: mediator complex | 1.22E-03 |
| 39 | GO:0030173: integral component of Golgi membrane | 1.81E-03 |
| 40 | GO:0005742: mitochondrial outer membrane translocase complex | 2.81E-03 |
| 41 | GO:0031090: organelle membrane | 3.17E-03 |
| 42 | GO:0005736: DNA-directed RNA polymerase I complex | 3.17E-03 |
| 43 | GO:0005666: DNA-directed RNA polymerase III complex | 3.55E-03 |
| 44 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.36E-03 |
| 45 | GO:0000502: proteasome complex | 4.66E-03 |
| 46 | GO:0016020: membrane | 4.88E-03 |
| 47 | GO:0031012: extracellular matrix | 5.22E-03 |
| 48 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 6.14E-03 |
| 49 | GO:0000419: DNA-directed RNA polymerase V complex | 6.62E-03 |
| 50 | GO:0070469: respiratory chain | 7.62E-03 |
| 51 | GO:0005839: proteasome core complex | 8.14E-03 |
| 52 | GO:0005737: cytoplasm | 8.22E-03 |
| 53 | GO:0005794: Golgi apparatus | 1.20E-02 |
| 54 | GO:0005789: endoplasmic reticulum membrane | 1.67E-02 |
| 55 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.95E-02 |
| 56 | GO:0048046: apoplast | 2.09E-02 |
| 57 | GO:0031201: SNARE complex | 2.80E-02 |
| 58 | GO:0005622: intracellular | 2.81E-02 |
| 59 | GO:0009941: chloroplast envelope | 3.21E-02 |
| 60 | GO:0009536: plastid | 4.25E-02 |
| 61 | GO:0005834: heterotrimeric G-protein complex | 4.32E-02 |
| 62 | GO:0009505: plant-type cell wall | 4.37E-02 |