GO Enrichment Analysis of Co-expressed Genes with
AT3G52500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042493: response to drug | 0.00E+00 |
| 2 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:0042407: cristae formation | 0.00E+00 |
| 5 | GO:0006223: uracil salvage | 0.00E+00 |
| 6 | GO:0010394: homogalacturonan metabolic process | 0.00E+00 |
| 7 | GO:0015976: carbon utilization | 7.28E-08 |
| 8 | GO:0010037: response to carbon dioxide | 1.84E-05 |
| 9 | GO:0006183: GTP biosynthetic process | 1.84E-05 |
| 10 | GO:2000122: negative regulation of stomatal complex development | 1.84E-05 |
| 11 | GO:0006833: water transport | 2.08E-05 |
| 12 | GO:0006633: fatty acid biosynthetic process | 2.77E-05 |
| 13 | GO:0000413: protein peptidyl-prolyl isomerization | 6.62E-05 |
| 14 | GO:0009826: unidimensional cell growth | 8.37E-05 |
| 15 | GO:0009735: response to cytokinin | 1.37E-04 |
| 16 | GO:0042547: cell wall modification involved in multidimensional cell growth | 1.52E-04 |
| 17 | GO:0042371: vitamin K biosynthetic process | 1.52E-04 |
| 18 | GO:0045488: pectin metabolic process | 1.52E-04 |
| 19 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.52E-04 |
| 20 | GO:0060627: regulation of vesicle-mediated transport | 1.52E-04 |
| 21 | GO:0010442: guard cell morphogenesis | 1.52E-04 |
| 22 | GO:0071555: cell wall organization | 1.68E-04 |
| 23 | GO:0042742: defense response to bacterium | 1.68E-04 |
| 24 | GO:0010411: xyloglucan metabolic process | 2.20E-04 |
| 25 | GO:0048829: root cap development | 2.36E-04 |
| 26 | GO:0071258: cellular response to gravity | 3.47E-04 |
| 27 | GO:0052541: plant-type cell wall cellulose metabolic process | 3.47E-04 |
| 28 | GO:0006423: cysteinyl-tRNA aminoacylation | 3.47E-04 |
| 29 | GO:0060919: auxin influx | 3.47E-04 |
| 30 | GO:0042546: cell wall biogenesis | 5.06E-04 |
| 31 | GO:2001295: malonyl-CoA biosynthetic process | 5.68E-04 |
| 32 | GO:0006065: UDP-glucuronate biosynthetic process | 5.68E-04 |
| 33 | GO:1902448: positive regulation of shade avoidance | 5.68E-04 |
| 34 | GO:0015840: urea transport | 5.68E-04 |
| 35 | GO:0003333: amino acid transmembrane transport | 6.79E-04 |
| 36 | GO:0009411: response to UV | 8.07E-04 |
| 37 | GO:0006241: CTP biosynthetic process | 8.13E-04 |
| 38 | GO:0051016: barbed-end actin filament capping | 8.13E-04 |
| 39 | GO:0006165: nucleoside diphosphate phosphorylation | 8.13E-04 |
| 40 | GO:0009650: UV protection | 8.13E-04 |
| 41 | GO:0006228: UTP biosynthetic process | 8.13E-04 |
| 42 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 9.44E-04 |
| 43 | GO:0034220: ion transmembrane transport | 1.02E-03 |
| 44 | GO:0042335: cuticle development | 1.02E-03 |
| 45 | GO:0051322: anaphase | 1.08E-03 |
| 46 | GO:0044206: UMP salvage | 1.08E-03 |
| 47 | GO:0045489: pectin biosynthetic process | 1.09E-03 |
| 48 | GO:0048359: mucilage metabolic process involved in seed coat development | 1.36E-03 |
| 49 | GO:0043097: pyrimidine nucleoside salvage | 1.36E-03 |
| 50 | GO:0032502: developmental process | 1.43E-03 |
| 51 | GO:0042549: photosystem II stabilization | 1.67E-03 |
| 52 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.67E-03 |
| 53 | GO:0006206: pyrimidine nucleobase metabolic process | 1.67E-03 |
| 54 | GO:0009854: oxidative photosynthetic carbon pathway | 2.01E-03 |
| 55 | GO:0010555: response to mannitol | 2.01E-03 |
| 56 | GO:0042372: phylloquinone biosynthetic process | 2.01E-03 |
| 57 | GO:0009612: response to mechanical stimulus | 2.01E-03 |
| 58 | GO:0006694: steroid biosynthetic process | 2.01E-03 |
| 59 | GO:0009610: response to symbiotic fungus | 2.36E-03 |
| 60 | GO:0048528: post-embryonic root development | 2.36E-03 |
| 61 | GO:0051693: actin filament capping | 2.36E-03 |
| 62 | GO:0030497: fatty acid elongation | 2.36E-03 |
| 63 | GO:0009645: response to low light intensity stimulus | 2.36E-03 |
| 64 | GO:0009734: auxin-activated signaling pathway | 2.71E-03 |
| 65 | GO:0007155: cell adhesion | 2.73E-03 |
| 66 | GO:0009642: response to light intensity | 2.73E-03 |
| 67 | GO:0042255: ribosome assembly | 2.73E-03 |
| 68 | GO:0006353: DNA-templated transcription, termination | 2.73E-03 |
| 69 | GO:0010119: regulation of stomatal movement | 2.88E-03 |
| 70 | GO:0006865: amino acid transport | 3.01E-03 |
| 71 | GO:0009808: lignin metabolic process | 3.12E-03 |
| 72 | GO:0009932: cell tip growth | 3.12E-03 |
| 73 | GO:0010233: phloem transport | 3.12E-03 |
| 74 | GO:0009657: plastid organization | 3.12E-03 |
| 75 | GO:0000902: cell morphogenesis | 3.53E-03 |
| 76 | GO:0015780: nucleotide-sugar transport | 3.53E-03 |
| 77 | GO:0043067: regulation of programmed cell death | 3.96E-03 |
| 78 | GO:0043069: negative regulation of programmed cell death | 4.40E-03 |
| 79 | GO:0006949: syncytium formation | 4.40E-03 |
| 80 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 4.40E-03 |
| 81 | GO:0000038: very long-chain fatty acid metabolic process | 4.86E-03 |
| 82 | GO:0009773: photosynthetic electron transport in photosystem I | 4.86E-03 |
| 83 | GO:0019684: photosynthesis, light reaction | 4.86E-03 |
| 84 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.86E-03 |
| 85 | GO:0009409: response to cold | 4.99E-03 |
| 86 | GO:0042538: hyperosmotic salinity response | 5.08E-03 |
| 87 | GO:0055085: transmembrane transport | 5.53E-03 |
| 88 | GO:0015979: photosynthesis | 5.81E-03 |
| 89 | GO:0006006: glucose metabolic process | 5.83E-03 |
| 90 | GO:0030036: actin cytoskeleton organization | 5.83E-03 |
| 91 | GO:0007015: actin filament organization | 6.33E-03 |
| 92 | GO:0010143: cutin biosynthetic process | 6.33E-03 |
| 93 | GO:0010207: photosystem II assembly | 6.33E-03 |
| 94 | GO:0019253: reductive pentose-phosphate cycle | 6.33E-03 |
| 95 | GO:0006412: translation | 6.76E-03 |
| 96 | GO:0006071: glycerol metabolic process | 7.40E-03 |
| 97 | GO:0010025: wax biosynthetic process | 7.40E-03 |
| 98 | GO:0016042: lipid catabolic process | 7.77E-03 |
| 99 | GO:0005992: trehalose biosynthetic process | 7.95E-03 |
| 100 | GO:0019344: cysteine biosynthetic process | 7.95E-03 |
| 101 | GO:0009116: nucleoside metabolic process | 7.95E-03 |
| 102 | GO:0010026: trichome differentiation | 8.51E-03 |
| 103 | GO:0043622: cortical microtubule organization | 8.51E-03 |
| 104 | GO:0007017: microtubule-based process | 8.51E-03 |
| 105 | GO:0030245: cellulose catabolic process | 9.69E-03 |
| 106 | GO:0009814: defense response, incompatible interaction | 9.69E-03 |
| 107 | GO:0040007: growth | 1.03E-02 |
| 108 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.03E-02 |
| 109 | GO:0009306: protein secretion | 1.09E-02 |
| 110 | GO:0006284: base-excision repair | 1.09E-02 |
| 111 | GO:0008033: tRNA processing | 1.22E-02 |
| 112 | GO:0010051: xylem and phloem pattern formation | 1.22E-02 |
| 113 | GO:0000226: microtubule cytoskeleton organization | 1.22E-02 |
| 114 | GO:0000271: polysaccharide biosynthetic process | 1.22E-02 |
| 115 | GO:0010197: polar nucleus fusion | 1.29E-02 |
| 116 | GO:0009741: response to brassinosteroid | 1.29E-02 |
| 117 | GO:0010305: leaf vascular tissue pattern formation | 1.29E-02 |
| 118 | GO:0007018: microtubule-based movement | 1.36E-02 |
| 119 | GO:0055114: oxidation-reduction process | 1.47E-02 |
| 120 | GO:0016132: brassinosteroid biosynthetic process | 1.50E-02 |
| 121 | GO:0002229: defense response to oomycetes | 1.50E-02 |
| 122 | GO:0010583: response to cyclopentenone | 1.57E-02 |
| 123 | GO:0008380: RNA splicing | 1.61E-02 |
| 124 | GO:0071281: cellular response to iron ion | 1.64E-02 |
| 125 | GO:0009416: response to light stimulus | 1.67E-02 |
| 126 | GO:0009828: plant-type cell wall loosening | 1.71E-02 |
| 127 | GO:0000910: cytokinesis | 1.86E-02 |
| 128 | GO:0010027: thylakoid membrane organization | 1.94E-02 |
| 129 | GO:0006810: transport | 2.00E-02 |
| 130 | GO:0009627: systemic acquired resistance | 2.10E-02 |
| 131 | GO:0042254: ribosome biogenesis | 2.13E-02 |
| 132 | GO:0006457: protein folding | 2.31E-02 |
| 133 | GO:0009817: defense response to fungus, incompatible interaction | 2.34E-02 |
| 134 | GO:0030244: cellulose biosynthetic process | 2.34E-02 |
| 135 | GO:0010311: lateral root formation | 2.43E-02 |
| 136 | GO:0009834: plant-type secondary cell wall biogenesis | 2.51E-02 |
| 137 | GO:0009853: photorespiration | 2.78E-02 |
| 138 | GO:0016051: carbohydrate biosynthetic process | 2.78E-02 |
| 139 | GO:0045454: cell redox homeostasis | 3.10E-02 |
| 140 | GO:0006631: fatty acid metabolic process | 3.14E-02 |
| 141 | GO:0042542: response to hydrogen peroxide | 3.23E-02 |
| 142 | GO:0009926: auxin polar transport | 3.32E-02 |
| 143 | GO:0008283: cell proliferation | 3.32E-02 |
| 144 | GO:0006869: lipid transport | 3.39E-02 |
| 145 | GO:0008643: carbohydrate transport | 3.52E-02 |
| 146 | GO:0006281: DNA repair | 3.81E-02 |
| 147 | GO:0006629: lipid metabolic process | 3.81E-02 |
| 148 | GO:0009664: plant-type cell wall organization | 3.91E-02 |
| 149 | GO:0009585: red, far-red light phototransduction | 4.11E-02 |
| 150 | GO:0006096: glycolytic process | 4.63E-02 |
| 151 | GO:0048367: shoot system development | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 2 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 3 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 4 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 5 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 6 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 7 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 8 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 9 | GO:0019843: rRNA binding | 8.32E-07 |
| 10 | GO:0004089: carbonate dehydratase activity | 1.15E-05 |
| 11 | GO:0010328: auxin influx transmembrane transporter activity | 1.84E-05 |
| 12 | GO:0009922: fatty acid elongase activity | 3.00E-05 |
| 13 | GO:0051920: peroxiredoxin activity | 6.27E-05 |
| 14 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.02E-04 |
| 15 | GO:0016209: antioxidant activity | 1.08E-04 |
| 16 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 1.52E-04 |
| 17 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.52E-04 |
| 18 | GO:0015200: methylammonium transmembrane transporter activity | 1.52E-04 |
| 19 | GO:0015250: water channel activity | 1.74E-04 |
| 20 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.20E-04 |
| 21 | GO:0003938: IMP dehydrogenase activity | 3.47E-04 |
| 22 | GO:0004817: cysteine-tRNA ligase activity | 3.47E-04 |
| 23 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.47E-04 |
| 24 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.47E-04 |
| 25 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.09E-04 |
| 26 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.09E-04 |
| 27 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.09E-04 |
| 28 | GO:0030267: glyoxylate reductase (NADP) activity | 5.68E-04 |
| 29 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 5.68E-04 |
| 30 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 5.68E-04 |
| 31 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 5.68E-04 |
| 32 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 5.68E-04 |
| 33 | GO:0050734: hydroxycinnamoyltransferase activity | 5.68E-04 |
| 34 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.68E-04 |
| 35 | GO:0004075: biotin carboxylase activity | 5.68E-04 |
| 36 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.85E-04 |
| 37 | GO:0016788: hydrolase activity, acting on ester bonds | 6.68E-04 |
| 38 | GO:0004550: nucleoside diphosphate kinase activity | 8.13E-04 |
| 39 | GO:0003727: single-stranded RNA binding | 8.75E-04 |
| 40 | GO:0052689: carboxylic ester hydrolase activity | 1.04E-03 |
| 41 | GO:0015204: urea transmembrane transporter activity | 1.08E-03 |
| 42 | GO:0004845: uracil phosphoribosyltransferase activity | 1.08E-03 |
| 43 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.08E-03 |
| 44 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.08E-03 |
| 45 | GO:0052793: pectin acetylesterase activity | 1.08E-03 |
| 46 | GO:0003989: acetyl-CoA carboxylase activity | 1.36E-03 |
| 47 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.36E-03 |
| 48 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.36E-03 |
| 49 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.38E-03 |
| 50 | GO:0008200: ion channel inhibitor activity | 1.67E-03 |
| 51 | GO:0008519: ammonium transmembrane transporter activity | 1.67E-03 |
| 52 | GO:0016208: AMP binding | 1.67E-03 |
| 53 | GO:0005200: structural constituent of cytoskeleton | 1.71E-03 |
| 54 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.71E-03 |
| 55 | GO:0004849: uridine kinase activity | 2.01E-03 |
| 56 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.01E-03 |
| 57 | GO:0008017: microtubule binding | 2.28E-03 |
| 58 | GO:0003735: structural constituent of ribosome | 2.90E-03 |
| 59 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 3.53E-03 |
| 60 | GO:0047617: acyl-CoA hydrolase activity | 3.96E-03 |
| 61 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.38E-03 |
| 62 | GO:0004805: trehalose-phosphatase activity | 4.40E-03 |
| 63 | GO:0015293: symporter activity | 4.55E-03 |
| 64 | GO:0051287: NAD binding | 4.90E-03 |
| 65 | GO:0003777: microtubule motor activity | 6.04E-03 |
| 66 | GO:0015171: amino acid transmembrane transporter activity | 6.04E-03 |
| 67 | GO:0008266: poly(U) RNA binding | 6.33E-03 |
| 68 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 9.69E-03 |
| 69 | GO:0030570: pectate lyase activity | 1.03E-02 |
| 70 | GO:0008810: cellulase activity | 1.03E-02 |
| 71 | GO:0008514: organic anion transmembrane transporter activity | 1.09E-02 |
| 72 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.25E-02 |
| 73 | GO:0008080: N-acetyltransferase activity | 1.29E-02 |
| 74 | GO:0051015: actin filament binding | 1.64E-02 |
| 75 | GO:0004601: peroxidase activity | 2.09E-02 |
| 76 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.34E-02 |
| 77 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.60E-02 |
| 78 | GO:0005507: copper ion binding | 2.60E-02 |
| 79 | GO:0003993: acid phosphatase activity | 2.86E-02 |
| 80 | GO:0050661: NADP binding | 3.05E-02 |
| 81 | GO:0005525: GTP binding | 3.12E-02 |
| 82 | GO:0005524: ATP binding | 3.47E-02 |
| 83 | GO:0003924: GTPase activity | 3.81E-02 |
| 84 | GO:0003690: double-stranded DNA binding | 4.21E-02 |
| 85 | GO:0004674: protein serine/threonine kinase activity | 4.50E-02 |
| 86 | GO:0003824: catalytic activity | 4.51E-02 |
| 87 | GO:0005215: transporter activity | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 3.55E-16 |
| 3 | GO:0048046: apoplast | 4.45E-11 |
| 4 | GO:0009941: chloroplast envelope | 3.06E-10 |
| 5 | GO:0009507: chloroplast | 3.31E-10 |
| 6 | GO:0009579: thylakoid | 3.96E-07 |
| 7 | GO:0005618: cell wall | 3.58E-06 |
| 8 | GO:0009505: plant-type cell wall | 8.39E-06 |
| 9 | GO:0000311: plastid large ribosomal subunit | 9.15E-06 |
| 10 | GO:0031225: anchored component of membrane | 1.16E-05 |
| 11 | GO:0031977: thylakoid lumen | 3.34E-05 |
| 12 | GO:0046658: anchored component of plasma membrane | 6.47E-05 |
| 13 | GO:0009535: chloroplast thylakoid membrane | 6.74E-05 |
| 14 | GO:0010319: stromule | 1.48E-04 |
| 15 | GO:0009547: plastid ribosome | 1.52E-04 |
| 16 | GO:0016020: membrane | 1.59E-04 |
| 17 | GO:0045298: tubulin complex | 1.66E-04 |
| 18 | GO:0008290: F-actin capping protein complex | 3.47E-04 |
| 19 | GO:0009506: plasmodesma | 5.06E-04 |
| 20 | GO:0005874: microtubule | 8.53E-04 |
| 21 | GO:0005886: plasma membrane | 9.12E-04 |
| 22 | GO:0072686: mitotic spindle | 1.36E-03 |
| 23 | GO:0009543: chloroplast thylakoid lumen | 1.43E-03 |
| 24 | GO:0005802: trans-Golgi network | 1.95E-03 |
| 25 | GO:0042807: central vacuole | 2.36E-03 |
| 26 | GO:0005768: endosome | 2.44E-03 |
| 27 | GO:0000326: protein storage vacuole | 3.12E-03 |
| 28 | GO:0005840: ribosome | 3.19E-03 |
| 29 | GO:0005819: spindle | 3.44E-03 |
| 30 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.53E-03 |
| 31 | GO:0000922: spindle pole | 3.53E-03 |
| 32 | GO:0022626: cytosolic ribosome | 3.60E-03 |
| 33 | GO:0055028: cortical microtubule | 4.40E-03 |
| 34 | GO:0005884: actin filament | 4.86E-03 |
| 35 | GO:0009574: preprophase band | 5.83E-03 |
| 36 | GO:0030095: chloroplast photosystem II | 6.33E-03 |
| 37 | GO:0005576: extracellular region | 6.52E-03 |
| 38 | GO:0005773: vacuole | 7.04E-03 |
| 39 | GO:0005769: early endosome | 7.40E-03 |
| 40 | GO:0009654: photosystem II oxygen evolving complex | 8.51E-03 |
| 41 | GO:0042651: thylakoid membrane | 8.51E-03 |
| 42 | GO:0005871: kinesin complex | 1.16E-02 |
| 43 | GO:0005887: integral component of plasma membrane | 1.19E-02 |
| 44 | GO:0019898: extrinsic component of membrane | 1.42E-02 |
| 45 | GO:0009504: cell plate | 1.42E-02 |
| 46 | GO:0000139: Golgi membrane | 1.77E-02 |
| 47 | GO:0005778: peroxisomal membrane | 1.79E-02 |
| 48 | GO:0009534: chloroplast thylakoid | 2.12E-02 |
| 49 | GO:0005774: vacuolar membrane | 2.52E-02 |
| 50 | GO:0015934: large ribosomal subunit | 2.60E-02 |
| 51 | GO:0005794: Golgi apparatus | 3.96E-02 |