GO Enrichment Analysis of Co-expressed Genes with
AT3G52340
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 2 | GO:0080093: regulation of photorespiration | 1.30E-05 |
| 3 | GO:0031998: regulation of fatty acid beta-oxidation | 1.30E-05 |
| 4 | GO:0009658: chloroplast organization | 5.49E-05 |
| 5 | GO:0006081: cellular aldehyde metabolic process | 6.16E-05 |
| 6 | GO:0005977: glycogen metabolic process | 6.16E-05 |
| 7 | GO:0006011: UDP-glucose metabolic process | 6.16E-05 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 9.36E-05 |
| 9 | GO:0010021: amylopectin biosynthetic process | 1.30E-04 |
| 10 | GO:0006097: glyoxylate cycle | 1.68E-04 |
| 11 | GO:0043097: pyrimidine nucleoside salvage | 1.68E-04 |
| 12 | GO:0010942: positive regulation of cell death | 2.10E-04 |
| 13 | GO:0006206: pyrimidine nucleobase metabolic process | 2.10E-04 |
| 14 | GO:0009854: oxidative photosynthetic carbon pathway | 2.53E-04 |
| 15 | GO:0009735: response to cytokinin | 2.61E-04 |
| 16 | GO:0009704: de-etiolation | 3.46E-04 |
| 17 | GO:0052543: callose deposition in cell wall | 3.46E-04 |
| 18 | GO:0048564: photosystem I assembly | 3.46E-04 |
| 19 | GO:0005978: glycogen biosynthetic process | 3.46E-04 |
| 20 | GO:0071482: cellular response to light stimulus | 3.94E-04 |
| 21 | GO:0000373: Group II intron splicing | 4.45E-04 |
| 22 | GO:0005982: starch metabolic process | 4.96E-04 |
| 23 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.03E-04 |
| 24 | GO:0006108: malate metabolic process | 7.14E-04 |
| 25 | GO:0005986: sucrose biosynthetic process | 7.14E-04 |
| 26 | GO:0010207: photosystem II assembly | 7.72E-04 |
| 27 | GO:0019253: reductive pentose-phosphate cycle | 7.72E-04 |
| 28 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.91E-04 |
| 29 | GO:0007017: microtubule-based process | 1.01E-03 |
| 30 | GO:0016226: iron-sulfur cluster assembly | 1.14E-03 |
| 31 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.14E-03 |
| 32 | GO:0006730: one-carbon metabolic process | 1.14E-03 |
| 33 | GO:0006810: transport | 1.15E-03 |
| 34 | GO:0042631: cellular response to water deprivation | 1.41E-03 |
| 35 | GO:0006814: sodium ion transport | 1.56E-03 |
| 36 | GO:0019252: starch biosynthetic process | 1.63E-03 |
| 37 | GO:0009791: post-embryonic development | 1.63E-03 |
| 38 | GO:0030163: protein catabolic process | 1.86E-03 |
| 39 | GO:0009853: photorespiration | 3.05E-03 |
| 40 | GO:0006099: tricarboxylic acid cycle | 3.15E-03 |
| 41 | GO:0000209: protein polyubiquitination | 3.73E-03 |
| 42 | GO:0055114: oxidation-reduction process | 3.84E-03 |
| 43 | GO:0006417: regulation of translation | 4.76E-03 |
| 44 | GO:0009058: biosynthetic process | 6.85E-03 |
| 45 | GO:0009845: seed germination | 6.98E-03 |
| 46 | GO:0046686: response to cadmium ion | 8.84E-03 |
| 47 | GO:0080167: response to karrikin | 1.31E-02 |
| 48 | GO:0015979: photosynthesis | 1.43E-02 |
| 49 | GO:0032259: methylation | 1.67E-02 |
| 50 | GO:0006397: mRNA processing | 1.77E-02 |
| 51 | GO:0008152: metabolic process | 1.85E-02 |
| 52 | GO:0009416: response to light stimulus | 2.59E-02 |
| 53 | GO:0009555: pollen development | 2.59E-02 |
| 54 | GO:0009611: response to wounding | 2.63E-02 |
| 55 | GO:0006457: protein folding | 3.11E-02 |
| 56 | GO:0006414: translational elongation | 3.45E-02 |
| 57 | GO:0009414: response to water deprivation | 4.21E-02 |
| 58 | GO:0042742: defense response to bacterium | 4.29E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033721: aldehyde dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 3 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 4 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 5 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 3.42E-05 |
| 6 | GO:0048038: quinone binding | 5.15E-05 |
| 7 | GO:0050307: sucrose-phosphate phosphatase activity | 6.16E-05 |
| 8 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 6.16E-05 |
| 9 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 6.16E-05 |
| 10 | GO:0043169: cation binding | 6.16E-05 |
| 11 | GO:0032947: protein complex scaffold | 6.16E-05 |
| 12 | GO:0008508: bile acid:sodium symporter activity | 9.36E-05 |
| 13 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.30E-04 |
| 14 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 2.10E-04 |
| 15 | GO:0016615: malate dehydrogenase activity | 2.10E-04 |
| 16 | GO:0004849: uridine kinase activity | 2.53E-04 |
| 17 | GO:0030060: L-malate dehydrogenase activity | 2.53E-04 |
| 18 | GO:0008135: translation factor activity, RNA binding | 3.94E-04 |
| 19 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.96E-04 |
| 20 | GO:0004089: carbonate dehydratase activity | 7.14E-04 |
| 21 | GO:0008266: poly(U) RNA binding | 7.72E-04 |
| 22 | GO:0051536: iron-sulfur cluster binding | 9.51E-04 |
| 23 | GO:0003746: translation elongation factor activity | 3.05E-03 |
| 24 | GO:0005198: structural molecule activity | 3.93E-03 |
| 25 | GO:0051287: NAD binding | 4.13E-03 |
| 26 | GO:0003777: microtubule motor activity | 4.76E-03 |
| 27 | GO:0031625: ubiquitin protein ligase binding | 4.76E-03 |
| 28 | GO:0016874: ligase activity | 5.43E-03 |
| 29 | GO:0016491: oxidoreductase activity | 7.47E-03 |
| 30 | GO:0008168: methyltransferase activity | 1.09E-02 |
| 31 | GO:0000287: magnesium ion binding | 1.11E-02 |
| 32 | GO:0008233: peptidase activity | 1.29E-02 |
| 33 | GO:0061630: ubiquitin protein ligase activity | 1.35E-02 |
| 34 | GO:0003924: GTPase activity | 1.72E-02 |
| 35 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.16E-02 |
| 36 | GO:0005525: GTP binding | 3.70E-02 |
| 37 | GO:0005506: iron ion binding | 4.24E-02 |
| 38 | GO:0003723: RNA binding | 4.44E-02 |
| 39 | GO:0005215: transporter activity | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009571: proplastid stroma | 0.00E+00 |
| 3 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 5.23E-11 |
| 5 | GO:0009570: chloroplast stroma | 2.00E-10 |
| 6 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.70E-06 |
| 7 | GO:0009941: chloroplast envelope | 1.18E-05 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 2.56E-05 |
| 9 | GO:0030286: dynein complex | 1.30E-04 |
| 10 | GO:0009501: amyloplast | 3.46E-04 |
| 11 | GO:0048046: apoplast | 5.94E-04 |
| 12 | GO:0019013: viral nucleocapsid | 7.14E-04 |
| 13 | GO:0005875: microtubule associated complex | 8.91E-04 |
| 14 | GO:0010319: stromule | 2.02E-03 |
| 15 | GO:0030529: intracellular ribonucleoprotein complex | 2.18E-03 |
| 16 | GO:0005777: peroxisome | 3.24E-03 |
| 17 | GO:0009579: thylakoid | 3.37E-03 |
| 18 | GO:0010287: plastoglobule | 6.36E-03 |
| 19 | GO:0031969: chloroplast membrane | 1.31E-02 |
| 20 | GO:0009534: chloroplast thylakoid | 2.96E-02 |
| 21 | GO:0005773: vacuole | 3.03E-02 |
| 22 | GO:0005829: cytosol | 3.90E-02 |
| 23 | GO:0005783: endoplasmic reticulum | 3.98E-02 |
| 24 | GO:0005840: ribosome | 4.43E-02 |
| 25 | GO:0005737: cytoplasm | 4.59E-02 |
| 26 | GO:0009536: plastid | 4.95E-02 |