Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G52040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072321: chaperone-mediated protein transport0.00E+00
2GO:0006626: protein targeting to mitochondrion2.51E-06
3GO:0000027: ribosomal large subunit assembly4.56E-06
4GO:0006430: lysyl-tRNA aminoacylation5.43E-06
5GO:1902626: assembly of large subunit precursor of preribosome2.75E-05
6GO:0045039: protein import into mitochondrial inner membrane2.75E-05
7GO:0009855: determination of bilateral symmetry4.27E-05
8GO:0042273: ribosomal large subunit biogenesis5.99E-05
9GO:0006364: rRNA processing7.94E-05
10GO:0080186: developmental vegetative growth1.46E-04
11GO:0016573: histone acetylation2.49E-04
12GO:0010162: seed dormancy process2.77E-04
13GO:0042254: ribosome biogenesis3.35E-04
14GO:0048467: gynoecium development3.96E-04
15GO:0009944: polarity specification of adaxial/abaxial axis4.90E-04
16GO:0007005: mitochondrion organization5.89E-04
17GO:0009294: DNA mediated transformation6.23E-04
18GO:0010197: polar nucleus fusion7.65E-04
19GO:0009960: endosperm development7.65E-04
20GO:0006412: translation1.45E-03
21GO:0009553: embryo sac development2.75E-03
22GO:0009793: embryo development ending in seed dormancy4.60E-03
23GO:0045892: negative regulation of transcription, DNA-templated7.28E-03
24GO:0006357: regulation of transcription from RNA polymerase II promoter1.01E-02
25GO:0009734: auxin-activated signaling pathway1.06E-02
26GO:0015031: protein transport2.44E-02
RankGO TermAdjusted P value
1GO:0004824: lysine-tRNA ligase activity5.43E-06
2GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.17E-05
3GO:0003735: structural constituent of ribosome4.41E-04
4GO:0004407: histone deacetylase activity4.90E-04
5GO:0003723: RNA binding2.42E-03
6GO:0008026: ATP-dependent helicase activity2.92E-03
7GO:0008565: protein transporter activity3.69E-03
8GO:0000166: nucleotide binding1.25E-02
9GO:0005507: copper ion binding1.60E-02
10GO:0005515: protein binding1.98E-02
11GO:0003729: mRNA binding2.73E-02
RankGO TermAdjusted P value
1GO:0042719: mitochondrial intermembrane space protein transporter complex0.00E+00
2GO:0005730: nucleolus7.31E-07
3GO:0005758: mitochondrial intermembrane space4.56E-06
4GO:0035267: NuA4 histone acetyltransferase complex1.49E-05
5GO:0022625: cytosolic large ribosomal subunit1.52E-05
6GO:0005840: ribosome1.89E-04
7GO:0005743: mitochondrial inner membrane5.53E-04
8GO:0005834: heterotrimeric G-protein complex2.58E-03
9GO:0005759: mitochondrial matrix3.81E-03
10GO:0080008: Cul4-RING E3 ubiquitin ligase complex5.84E-03
11GO:0005774: vacuolar membrane6.86E-03
12GO:0009506: plasmodesma2.64E-02
13GO:0005789: endoplasmic reticulum membrane2.79E-02
14GO:0005829: cytosol3.13E-02
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Gene type



Gene DE type