GO Enrichment Analysis of Co-expressed Genes with
AT3G51800
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 2 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 3 | GO:0006412: translation | 7.38E-12 |
| 4 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.64E-06 |
| 5 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.64E-06 |
| 6 | GO:1990258: histone glutamine methylation | 9.64E-06 |
| 7 | GO:0006407: rRNA export from nucleus | 9.64E-06 |
| 8 | GO:0031120: snRNA pseudouridine synthesis | 9.64E-06 |
| 9 | GO:0031118: rRNA pseudouridine synthesis | 9.64E-06 |
| 10 | GO:0000494: box C/D snoRNA 3'-end processing | 9.64E-06 |
| 11 | GO:0042254: ribosome biogenesis | 3.19E-05 |
| 12 | GO:0051211: anisotropic cell growth | 4.69E-05 |
| 13 | GO:0042256: mature ribosome assembly | 4.69E-05 |
| 14 | GO:0033356: UDP-L-arabinose metabolic process | 9.96E-05 |
| 15 | GO:0031167: rRNA methylation | 1.30E-04 |
| 16 | GO:0009423: chorismate biosynthetic process | 1.98E-04 |
| 17 | GO:0000028: ribosomal small subunit assembly | 2.72E-04 |
| 18 | GO:0001510: RNA methylation | 3.11E-04 |
| 19 | GO:0006413: translational initiation | 3.94E-04 |
| 20 | GO:0009073: aromatic amino acid family biosynthetic process | 4.78E-04 |
| 21 | GO:0006626: protein targeting to mitochondrion | 5.68E-04 |
| 22 | GO:0043622: cortical microtubule organization | 8.07E-04 |
| 23 | GO:0007005: mitochondrion organization | 9.08E-04 |
| 24 | GO:0008033: tRNA processing | 1.12E-03 |
| 25 | GO:0000413: protein peptidyl-prolyl isomerization | 1.12E-03 |
| 26 | GO:0071472: cellular response to salt stress | 1.18E-03 |
| 27 | GO:0030244: cellulose biosynthetic process | 2.05E-03 |
| 28 | GO:0009832: plant-type cell wall biogenesis | 2.12E-03 |
| 29 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.24E-03 |
| 30 | GO:0006364: rRNA processing | 3.49E-03 |
| 31 | GO:0009826: unidimensional cell growth | 8.51E-03 |
| 32 | GO:0009793: embryo development ending in seed dormancy | 9.14E-03 |
| 33 | GO:0006970: response to osmotic stress | 9.21E-03 |
| 34 | GO:0009651: response to salt stress | 1.33E-02 |
| 35 | GO:0009735: response to cytokinin | 1.89E-02 |
| 36 | GO:0006457: protein folding | 2.42E-02 |
| 37 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.50E-02 |
| 38 | GO:0071555: cell wall organization | 3.33E-02 |
| 39 | GO:0015031: protein transport | 3.95E-02 |
| 40 | GO:0046686: response to cadmium ion | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 2 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 3.76E-12 |
| 4 | GO:0003729: mRNA binding | 2.95E-09 |
| 5 | GO:1990259: histone-glutamine methyltransferase activity | 9.64E-06 |
| 6 | GO:0008649: rRNA methyltransferase activity | 4.69E-05 |
| 7 | GO:0031369: translation initiation factor binding | 1.63E-04 |
| 8 | GO:0003723: RNA binding | 1.65E-04 |
| 9 | GO:0030515: snoRNA binding | 2.34E-04 |
| 10 | GO:0003743: translation initiation factor activity | 4.91E-04 |
| 11 | GO:0009982: pseudouridine synthase activity | 5.68E-04 |
| 12 | GO:0010181: FMN binding | 1.23E-03 |
| 13 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.05E-03 |
| 14 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.16E-03 |
| 15 | GO:0019843: rRNA binding | 5.17E-03 |
| 16 | GO:0000166: nucleotide binding | 2.01E-02 |
| 17 | GO:0046872: metal ion binding | 4.16E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0022626: cytosolic ribosome | 5.30E-13 |
| 2 | GO:0005730: nucleolus | 1.80E-12 |
| 3 | GO:0022627: cytosolic small ribosomal subunit | 5.45E-09 |
| 4 | GO:0005829: cytosol | 5.54E-08 |
| 5 | GO:0015935: small ribosomal subunit | 6.82E-08 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 1.15E-06 |
| 7 | GO:0005840: ribosome | 1.50E-06 |
| 8 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.34E-06 |
| 9 | GO:0009506: plasmodesma | 5.75E-06 |
| 10 | GO:0030686: 90S preribosome | 9.64E-06 |
| 11 | GO:0031429: box H/ACA snoRNP complex | 7.16E-05 |
| 12 | GO:0031428: box C/D snoRNP complex | 1.63E-04 |
| 13 | GO:0010005: cortical microtubule, transverse to long axis | 1.98E-04 |
| 14 | GO:0005763: mitochondrial small ribosomal subunit | 3.51E-04 |
| 15 | GO:0005876: spindle microtubule | 3.93E-04 |
| 16 | GO:0015030: Cajal body | 3.93E-04 |
| 17 | GO:0055028: cortical microtubule | 4.35E-04 |
| 18 | GO:0032040: small-subunit processome | 5.23E-04 |
| 19 | GO:0009574: preprophase band | 5.68E-04 |
| 20 | GO:0005737: cytoplasm | 7.03E-04 |
| 21 | GO:0005758: mitochondrial intermembrane space | 7.58E-04 |
| 22 | GO:0016592: mediator complex | 1.41E-03 |
| 23 | GO:0005618: cell wall | 2.51E-03 |
| 24 | GO:0005794: Golgi apparatus | 3.72E-03 |
| 25 | GO:0016020: membrane | 5.17E-03 |
| 26 | GO:0009524: phragmoplast | 5.36E-03 |
| 27 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 9.33E-03 |
| 28 | GO:0005743: mitochondrial inner membrane | 1.27E-02 |
| 29 | GO:0005774: vacuolar membrane | 1.37E-02 |
| 30 | GO:0005773: vacuole | 2.11E-02 |
| 31 | GO:0005622: intracellular | 3.03E-02 |
| 32 | GO:0009536: plastid | 3.85E-02 |
| 33 | GO:0005789: endoplasmic reticulum membrane | 4.50E-02 |
| 34 | GO:0009507: chloroplast | 4.79E-02 |