GO Enrichment Analysis of Co-expressed Genes with
AT3G51420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 3 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 4 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 5 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 6 | GO:0010362: negative regulation of anion channel activity by blue light | 7.58E-05 |
| 7 | GO:0051775: response to redox state | 7.58E-05 |
| 8 | GO:0009443: pyridoxal 5'-phosphate salvage | 7.58E-05 |
| 9 | GO:0046900: tetrahydrofolylpolyglutamate metabolic process | 7.58E-05 |
| 10 | GO:0080093: regulation of photorespiration | 7.58E-05 |
| 11 | GO:0031998: regulation of fatty acid beta-oxidation | 7.58E-05 |
| 12 | GO:0009853: photorespiration | 9.35E-05 |
| 13 | GO:0006108: malate metabolic process | 1.36E-04 |
| 14 | GO:0009658: chloroplast organization | 1.40E-04 |
| 15 | GO:0097054: L-glutamate biosynthetic process | 1.81E-04 |
| 16 | GO:0045910: negative regulation of DNA recombination | 3.05E-04 |
| 17 | GO:0000913: preprophase band assembly | 3.05E-04 |
| 18 | GO:0031022: nuclear migration along microfilament | 3.05E-04 |
| 19 | GO:0006954: inflammatory response | 3.05E-04 |
| 20 | GO:0006107: oxaloacetate metabolic process | 4.41E-04 |
| 21 | GO:0006537: glutamate biosynthetic process | 4.41E-04 |
| 22 | GO:0046836: glycolipid transport | 4.41E-04 |
| 23 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.41E-04 |
| 24 | GO:0071484: cellular response to light intensity | 4.41E-04 |
| 25 | GO:0048442: sepal development | 5.87E-04 |
| 26 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.87E-04 |
| 27 | GO:0006546: glycine catabolic process | 5.87E-04 |
| 28 | GO:0006734: NADH metabolic process | 5.87E-04 |
| 29 | GO:0009902: chloroplast relocation | 5.87E-04 |
| 30 | GO:0019676: ammonia assimilation cycle | 5.87E-04 |
| 31 | GO:0043097: pyrimidine nucleoside salvage | 7.44E-04 |
| 32 | GO:0010117: photoprotection | 7.44E-04 |
| 33 | GO:0009904: chloroplast accumulation movement | 7.44E-04 |
| 34 | GO:0006097: glyoxylate cycle | 7.44E-04 |
| 35 | GO:0009735: response to cytokinin | 8.00E-04 |
| 36 | GO:0006206: pyrimidine nucleobase metabolic process | 9.07E-04 |
| 37 | GO:0018298: protein-chromophore linkage | 1.00E-03 |
| 38 | GO:0042026: protein refolding | 1.08E-03 |
| 39 | GO:0010076: maintenance of floral meristem identity | 1.08E-03 |
| 40 | GO:0006458: 'de novo' protein folding | 1.08E-03 |
| 41 | GO:0009903: chloroplast avoidance movement | 1.08E-03 |
| 42 | GO:0009854: oxidative photosynthetic carbon pathway | 1.08E-03 |
| 43 | GO:0009645: response to low light intensity stimulus | 1.26E-03 |
| 44 | GO:0006099: tricarboxylic acid cycle | 1.31E-03 |
| 45 | GO:0048564: photosystem I assembly | 1.46E-03 |
| 46 | GO:0009704: de-etiolation | 1.46E-03 |
| 47 | GO:0071482: cellular response to light stimulus | 1.66E-03 |
| 48 | GO:0009644: response to high light intensity | 1.73E-03 |
| 49 | GO:0006098: pentose-phosphate shunt | 1.87E-03 |
| 50 | GO:0000373: Group II intron splicing | 1.87E-03 |
| 51 | GO:0009638: phototropism | 2.09E-03 |
| 52 | GO:0055114: oxidation-reduction process | 2.29E-03 |
| 53 | GO:0048441: petal development | 2.32E-03 |
| 54 | GO:0006298: mismatch repair | 2.32E-03 |
| 55 | GO:0009773: photosynthetic electron transport in photosystem I | 2.56E-03 |
| 56 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.56E-03 |
| 57 | GO:0006094: gluconeogenesis | 3.06E-03 |
| 58 | GO:0009767: photosynthetic electron transport chain | 3.06E-03 |
| 59 | GO:0048440: carpel development | 3.32E-03 |
| 60 | GO:0006541: glutamine metabolic process | 3.32E-03 |
| 61 | GO:0019253: reductive pentose-phosphate cycle | 3.32E-03 |
| 62 | GO:0010207: photosystem II assembly | 3.32E-03 |
| 63 | GO:0042343: indole glucosinolate metabolic process | 3.59E-03 |
| 64 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.86E-03 |
| 65 | GO:0007017: microtubule-based process | 4.43E-03 |
| 66 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.43E-03 |
| 67 | GO:0061077: chaperone-mediated protein folding | 4.73E-03 |
| 68 | GO:0006810: transport | 4.73E-03 |
| 69 | GO:0098542: defense response to other organism | 4.73E-03 |
| 70 | GO:0016226: iron-sulfur cluster assembly | 5.03E-03 |
| 71 | GO:0030433: ubiquitin-dependent ERAD pathway | 5.03E-03 |
| 72 | GO:0048443: stamen development | 5.66E-03 |
| 73 | GO:0042631: cellular response to water deprivation | 6.31E-03 |
| 74 | GO:0010118: stomatal movement | 6.31E-03 |
| 75 | GO:0006520: cellular amino acid metabolic process | 6.64E-03 |
| 76 | GO:0007018: microtubule-based movement | 6.99E-03 |
| 77 | GO:0006814: sodium ion transport | 6.99E-03 |
| 78 | GO:0009791: post-embryonic development | 7.34E-03 |
| 79 | GO:0019252: starch biosynthetic process | 7.34E-03 |
| 80 | GO:0016032: viral process | 8.05E-03 |
| 81 | GO:0030163: protein catabolic process | 8.42E-03 |
| 82 | GO:0000910: cytokinesis | 9.56E-03 |
| 83 | GO:0080167: response to karrikin | 1.00E-02 |
| 84 | GO:0000160: phosphorelay signal transduction system | 1.24E-02 |
| 85 | GO:0009637: response to blue light | 1.42E-02 |
| 86 | GO:0051707: response to other organism | 1.70E-02 |
| 87 | GO:0009744: response to sucrose | 1.70E-02 |
| 88 | GO:0000209: protein polyubiquitination | 1.75E-02 |
| 89 | GO:0009409: response to cold | 1.80E-02 |
| 90 | GO:0000165: MAPK cascade | 1.94E-02 |
| 91 | GO:0046686: response to cadmium ion | 2.15E-02 |
| 92 | GO:0006417: regulation of translation | 2.25E-02 |
| 93 | GO:0006096: glycolytic process | 2.36E-02 |
| 94 | GO:0009058: biosynthetic process | 3.28E-02 |
| 95 | GO:0009845: seed germination | 3.34E-02 |
| 96 | GO:0006457: protein folding | 3.40E-02 |
| 97 | GO:0007623: circadian rhythm | 3.98E-02 |
| 98 | GO:0006508: proteolysis | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 3 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 4 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 6 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 7 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 8 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 9 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 10 | GO:0016615: malate dehydrogenase activity | 1.43E-05 |
| 11 | GO:0030060: L-malate dehydrogenase activity | 2.05E-05 |
| 12 | GO:0004033: aldo-keto reductase (NADP) activity | 3.68E-05 |
| 13 | GO:0008242: omega peptidase activity | 7.58E-05 |
| 14 | GO:0008746: NAD(P)+ transhydrogenase activity | 7.58E-05 |
| 15 | GO:0016041: glutamate synthase (ferredoxin) activity | 7.58E-05 |
| 16 | GO:0034722: gamma-glutamyl-peptidase activity | 1.81E-04 |
| 17 | GO:0032947: protein complex scaffold | 3.05E-04 |
| 18 | GO:0070402: NADPH binding | 3.05E-04 |
| 19 | GO:0017089: glycolipid transporter activity | 4.41E-04 |
| 20 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.41E-04 |
| 21 | GO:0009882: blue light photoreceptor activity | 4.41E-04 |
| 22 | GO:0008508: bile acid:sodium symporter activity | 4.41E-04 |
| 23 | GO:0048038: quinone binding | 5.45E-04 |
| 24 | GO:0051861: glycolipid binding | 5.87E-04 |
| 25 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.87E-04 |
| 26 | GO:0008453: alanine-glyoxylate transaminase activity | 5.87E-04 |
| 27 | GO:0009011: starch synthase activity | 5.87E-04 |
| 28 | GO:0051538: 3 iron, 4 sulfur cluster binding | 7.44E-04 |
| 29 | GO:0004332: fructose-bisphosphate aldolase activity | 9.07E-04 |
| 30 | GO:0030983: mismatched DNA binding | 9.07E-04 |
| 31 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.08E-03 |
| 32 | GO:0004849: uridine kinase activity | 1.08E-03 |
| 33 | GO:0004222: metalloendopeptidase activity | 1.10E-03 |
| 34 | GO:0043022: ribosome binding | 1.46E-03 |
| 35 | GO:0008135: translation factor activity, RNA binding | 1.66E-03 |
| 36 | GO:0003777: microtubule motor activity | 2.37E-03 |
| 37 | GO:0044183: protein binding involved in protein folding | 2.56E-03 |
| 38 | GO:0000155: phosphorelay sensor kinase activity | 3.06E-03 |
| 39 | GO:0008266: poly(U) RNA binding | 3.32E-03 |
| 40 | GO:0031409: pigment binding | 3.86E-03 |
| 41 | GO:0016491: oxidoreductase activity | 4.01E-03 |
| 42 | GO:0051536: iron-sulfur cluster binding | 4.15E-03 |
| 43 | GO:0043424: protein histidine kinase binding | 4.43E-03 |
| 44 | GO:0008080: N-acetyltransferase activity | 6.64E-03 |
| 45 | GO:0010181: FMN binding | 6.99E-03 |
| 46 | GO:0003684: damaged DNA binding | 8.79E-03 |
| 47 | GO:0016168: chlorophyll binding | 1.03E-02 |
| 48 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.33E-02 |
| 49 | GO:0003746: translation elongation factor activity | 1.42E-02 |
| 50 | GO:0009055: electron carrier activity | 1.59E-02 |
| 51 | GO:0005198: structural molecule activity | 1.84E-02 |
| 52 | GO:0051287: NAD binding | 1.94E-02 |
| 53 | GO:0031625: ubiquitin protein ligase binding | 2.25E-02 |
| 54 | GO:0016887: ATPase activity | 2.30E-02 |
| 55 | GO:0051082: unfolded protein binding | 2.69E-02 |
| 56 | GO:0016787: hydrolase activity | 3.19E-02 |
| 57 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.47E-02 |
| 58 | GO:0008017: microtubule binding | 4.11E-02 |
| 59 | GO:0005525: GTP binding | 4.31E-02 |
| 60 | GO:0042802: identical protein binding | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009571: proplastid stroma | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 2.68E-22 |
| 4 | GO:0009941: chloroplast envelope | 3.69E-10 |
| 5 | GO:0009570: chloroplast stroma | 3.03E-09 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.56E-07 |
| 7 | GO:0048046: apoplast | 1.18E-05 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.84E-05 |
| 9 | GO:0009782: photosystem I antenna complex | 7.58E-05 |
| 10 | GO:0009344: nitrite reductase complex [NAD(P)H] | 7.58E-05 |
| 11 | GO:0009534: chloroplast thylakoid | 2.11E-04 |
| 12 | GO:0005960: glycine cleavage complex | 4.41E-04 |
| 13 | GO:0030286: dynein complex | 5.87E-04 |
| 14 | GO:0009579: thylakoid | 1.19E-03 |
| 15 | GO:0009706: chloroplast inner membrane | 3.03E-03 |
| 16 | GO:0030095: chloroplast photosystem II | 3.32E-03 |
| 17 | GO:0010287: plastoglobule | 3.59E-03 |
| 18 | GO:0030076: light-harvesting complex | 3.59E-03 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 3.79E-03 |
| 20 | GO:0005875: microtubule associated complex | 3.86E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 4.43E-03 |
| 22 | GO:0005777: peroxisome | 5.96E-03 |
| 23 | GO:0005871: kinesin complex | 5.98E-03 |
| 24 | GO:0009504: cell plate | 7.34E-03 |
| 25 | GO:0019898: extrinsic component of membrane | 7.34E-03 |
| 26 | GO:0005694: chromosome | 8.05E-03 |
| 27 | GO:0010319: stromule | 9.17E-03 |
| 28 | GO:0030529: intracellular ribonucleoprotein complex | 9.95E-03 |
| 29 | GO:0009707: chloroplast outer membrane | 1.20E-02 |
| 30 | GO:0005819: spindle | 1.51E-02 |
| 31 | GO:0009536: plastid | 1.59E-02 |
| 32 | GO:0031977: thylakoid lumen | 1.60E-02 |
| 33 | GO:0016021: integral component of membrane | 2.29E-02 |
| 34 | GO:0005623: cell | 3.22E-02 |
| 35 | GO:0005773: vacuole | 3.25E-02 |
| 36 | GO:0009524: phragmoplast | 3.28E-02 |
| 37 | GO:0005759: mitochondrial matrix | 3.72E-02 |