GO Enrichment Analysis of Co-expressed Genes with
AT3G50820
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033231: carbohydrate export | 0.00E+00 |
| 2 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 3 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 4 | GO:0042425: choline biosynthetic process | 0.00E+00 |
| 5 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 6 | GO:0010207: photosystem II assembly | 8.15E-06 |
| 7 | GO:0010027: thylakoid membrane organization | 1.09E-04 |
| 8 | GO:1902334: fructose export from vacuole to cytoplasm | 1.20E-04 |
| 9 | GO:0015755: fructose transport | 1.20E-04 |
| 10 | GO:0019646: aerobic electron transport chain | 1.20E-04 |
| 11 | GO:0043953: protein transport by the Tat complex | 1.20E-04 |
| 12 | GO:0010480: microsporocyte differentiation | 1.20E-04 |
| 13 | GO:0065002: intracellular protein transmembrane transport | 1.20E-04 |
| 14 | GO:0010028: xanthophyll cycle | 1.20E-04 |
| 15 | GO:0034337: RNA folding | 1.20E-04 |
| 16 | GO:0000305: response to oxygen radical | 1.20E-04 |
| 17 | GO:0035304: regulation of protein dephosphorylation | 2.77E-04 |
| 18 | GO:0018026: peptidyl-lysine monomethylation | 2.77E-04 |
| 19 | GO:0016122: xanthophyll metabolic process | 2.77E-04 |
| 20 | GO:0010289: homogalacturonan biosynthetic process | 2.77E-04 |
| 21 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.77E-04 |
| 22 | GO:0006833: water transport | 3.68E-04 |
| 23 | GO:1902448: positive regulation of shade avoidance | 4.58E-04 |
| 24 | GO:0090391: granum assembly | 4.58E-04 |
| 25 | GO:0005977: glycogen metabolic process | 4.58E-04 |
| 26 | GO:0071369: cellular response to ethylene stimulus | 5.89E-04 |
| 27 | GO:0080170: hydrogen peroxide transmembrane transport | 6.57E-04 |
| 28 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 6.57E-04 |
| 29 | GO:0051639: actin filament network formation | 6.57E-04 |
| 30 | GO:0015979: photosynthesis | 6.66E-04 |
| 31 | GO:0034220: ion transmembrane transport | 7.45E-04 |
| 32 | GO:0006109: regulation of carbohydrate metabolic process | 8.72E-04 |
| 33 | GO:0015994: chlorophyll metabolic process | 8.72E-04 |
| 34 | GO:0006749: glutathione metabolic process | 8.72E-04 |
| 35 | GO:0010021: amylopectin biosynthetic process | 8.72E-04 |
| 36 | GO:0051764: actin crosslink formation | 8.72E-04 |
| 37 | GO:0019252: starch biosynthetic process | 9.17E-04 |
| 38 | GO:0006656: phosphatidylcholine biosynthetic process | 1.10E-03 |
| 39 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.10E-03 |
| 40 | GO:0016554: cytidine to uridine editing | 1.35E-03 |
| 41 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.35E-03 |
| 42 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.35E-03 |
| 43 | GO:0042549: photosystem II stabilization | 1.35E-03 |
| 44 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.35E-03 |
| 45 | GO:0007623: circadian rhythm | 1.42E-03 |
| 46 | GO:1901259: chloroplast rRNA processing | 1.61E-03 |
| 47 | GO:0042372: phylloquinone biosynthetic process | 1.61E-03 |
| 48 | GO:0015995: chlorophyll biosynthetic process | 1.63E-03 |
| 49 | GO:0048437: floral organ development | 1.89E-03 |
| 50 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.89E-03 |
| 51 | GO:0010196: nonphotochemical quenching | 1.89E-03 |
| 52 | GO:1900057: positive regulation of leaf senescence | 1.89E-03 |
| 53 | GO:0048528: post-embryonic root development | 1.89E-03 |
| 54 | GO:0009772: photosynthetic electron transport in photosystem II | 1.89E-03 |
| 55 | GO:0005978: glycogen biosynthetic process | 2.19E-03 |
| 56 | GO:0009642: response to light intensity | 2.19E-03 |
| 57 | GO:0006605: protein targeting | 2.19E-03 |
| 58 | GO:0071482: cellular response to light stimulus | 2.50E-03 |
| 59 | GO:0015996: chlorophyll catabolic process | 2.50E-03 |
| 60 | GO:0010206: photosystem II repair | 2.82E-03 |
| 61 | GO:0000373: Group II intron splicing | 2.82E-03 |
| 62 | GO:0010205: photoinhibition | 3.16E-03 |
| 63 | GO:1900865: chloroplast RNA modification | 3.16E-03 |
| 64 | GO:0005975: carbohydrate metabolic process | 3.40E-03 |
| 65 | GO:0006995: cellular response to nitrogen starvation | 3.51E-03 |
| 66 | GO:0055062: phosphate ion homeostasis | 3.51E-03 |
| 67 | GO:0019684: photosynthesis, light reaction | 3.88E-03 |
| 68 | GO:0043085: positive regulation of catalytic activity | 3.88E-03 |
| 69 | GO:1903507: negative regulation of nucleic acid-templated transcription | 3.88E-03 |
| 70 | GO:0009750: response to fructose | 3.88E-03 |
| 71 | GO:0048229: gametophyte development | 3.88E-03 |
| 72 | GO:0005983: starch catabolic process | 4.26E-03 |
| 73 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.26E-03 |
| 74 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.64E-03 |
| 75 | GO:0010075: regulation of meristem growth | 4.64E-03 |
| 76 | GO:0006094: gluconeogenesis | 4.64E-03 |
| 77 | GO:0009934: regulation of meristem structural organization | 5.04E-03 |
| 78 | GO:0071732: cellular response to nitric oxide | 5.46E-03 |
| 79 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.88E-03 |
| 80 | GO:0051017: actin filament bundle assembly | 6.32E-03 |
| 81 | GO:0008299: isoprenoid biosynthetic process | 6.76E-03 |
| 82 | GO:0051260: protein homooligomerization | 7.22E-03 |
| 83 | GO:0035428: hexose transmembrane transport | 7.69E-03 |
| 84 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 7.69E-03 |
| 85 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 8.18E-03 |
| 86 | GO:0009686: gibberellin biosynthetic process | 8.18E-03 |
| 87 | GO:0070417: cellular response to cold | 9.17E-03 |
| 88 | GO:0080022: primary root development | 9.68E-03 |
| 89 | GO:0000413: protein peptidyl-prolyl isomerization | 9.68E-03 |
| 90 | GO:0048653: anther development | 9.68E-03 |
| 91 | GO:0006662: glycerol ether metabolic process | 1.02E-02 |
| 92 | GO:0046323: glucose import | 1.02E-02 |
| 93 | GO:0010268: brassinosteroid homeostasis | 1.02E-02 |
| 94 | GO:0009646: response to absence of light | 1.07E-02 |
| 95 | GO:0010183: pollen tube guidance | 1.13E-02 |
| 96 | GO:0016132: brassinosteroid biosynthetic process | 1.18E-02 |
| 97 | GO:0006810: transport | 1.21E-02 |
| 98 | GO:0055114: oxidation-reduction process | 1.29E-02 |
| 99 | GO:0071281: cellular response to iron ion | 1.30E-02 |
| 100 | GO:0016125: sterol metabolic process | 1.36E-02 |
| 101 | GO:0009828: plant-type cell wall loosening | 1.36E-02 |
| 102 | GO:0009567: double fertilization forming a zygote and endosperm | 1.36E-02 |
| 103 | GO:0009826: unidimensional cell growth | 1.44E-02 |
| 104 | GO:0055085: transmembrane transport | 1.48E-02 |
| 105 | GO:0009631: cold acclimation | 2.05E-02 |
| 106 | GO:0016051: carbohydrate biosynthetic process | 2.19E-02 |
| 107 | GO:0045454: cell redox homeostasis | 2.23E-02 |
| 108 | GO:0034599: cellular response to oxidative stress | 2.26E-02 |
| 109 | GO:0006631: fatty acid metabolic process | 2.48E-02 |
| 110 | GO:0032259: methylation | 2.63E-02 |
| 111 | GO:0006397: mRNA processing | 2.86E-02 |
| 112 | GO:0031347: regulation of defense response | 3.01E-02 |
| 113 | GO:0008152: metabolic process | 3.02E-02 |
| 114 | GO:0009664: plant-type cell wall organization | 3.09E-02 |
| 115 | GO:0009585: red, far-red light phototransduction | 3.25E-02 |
| 116 | GO:0006096: glycolytic process | 3.66E-02 |
| 117 | GO:0043086: negative regulation of catalytic activity | 3.66E-02 |
| 118 | GO:0009624: response to nematode | 4.17E-02 |
| 119 | GO:0009742: brassinosteroid mediated signaling pathway | 4.35E-02 |
| 120 | GO:0009735: response to cytokinin | 4.44E-02 |
| 121 | GO:0009416: response to light stimulus | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0015284: fructose uniporter activity | 0.00E+00 |
| 5 | GO:0010242: oxygen evolving activity | 1.20E-04 |
| 6 | GO:0051777: ent-kaurenoate oxidase activity | 1.20E-04 |
| 7 | GO:0004856: xylulokinase activity | 1.20E-04 |
| 8 | GO:0034256: chlorophyll(ide) b reductase activity | 1.20E-04 |
| 9 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.20E-04 |
| 10 | GO:0050139: nicotinate-N-glucosyltransferase activity | 1.20E-04 |
| 11 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.20E-04 |
| 12 | GO:0004565: beta-galactosidase activity | 2.59E-04 |
| 13 | GO:0004312: fatty acid synthase activity | 2.77E-04 |
| 14 | GO:0019156: isoamylase activity | 2.77E-04 |
| 15 | GO:0005353: fructose transmembrane transporter activity | 2.77E-04 |
| 16 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 2.77E-04 |
| 17 | GO:0004362: glutathione-disulfide reductase activity | 2.77E-04 |
| 18 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.77E-04 |
| 19 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.84E-04 |
| 20 | GO:0005528: FK506 binding | 4.09E-04 |
| 21 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 4.58E-04 |
| 22 | GO:0004751: ribose-5-phosphate isomerase activity | 4.58E-04 |
| 23 | GO:0070402: NADPH binding | 4.58E-04 |
| 24 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 4.58E-04 |
| 25 | GO:0019201: nucleotide kinase activity | 6.57E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 6.57E-04 |
| 27 | GO:0004045: aminoacyl-tRNA hydrolase activity | 8.72E-04 |
| 28 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 8.72E-04 |
| 29 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 8.72E-04 |
| 30 | GO:0016279: protein-lysine N-methyltransferase activity | 8.72E-04 |
| 31 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.10E-03 |
| 32 | GO:0004332: fructose-bisphosphate aldolase activity | 1.35E-03 |
| 33 | GO:0042578: phosphoric ester hydrolase activity | 1.35E-03 |
| 34 | GO:0004556: alpha-amylase activity | 1.35E-03 |
| 35 | GO:0015250: water channel activity | 1.39E-03 |
| 36 | GO:0004017: adenylate kinase activity | 1.61E-03 |
| 37 | GO:0008047: enzyme activator activity | 3.51E-03 |
| 38 | GO:0047372: acylglycerol lipase activity | 3.88E-03 |
| 39 | GO:0031072: heat shock protein binding | 4.64E-03 |
| 40 | GO:0009982: pseudouridine synthase activity | 4.64E-03 |
| 41 | GO:0008266: poly(U) RNA binding | 5.04E-03 |
| 42 | GO:0051119: sugar transmembrane transporter activity | 5.46E-03 |
| 43 | GO:0003714: transcription corepressor activity | 6.32E-03 |
| 44 | GO:0003954: NADH dehydrogenase activity | 6.32E-03 |
| 45 | GO:0004857: enzyme inhibitor activity | 6.32E-03 |
| 46 | GO:0043424: protein histidine kinase binding | 6.76E-03 |
| 47 | GO:0033612: receptor serine/threonine kinase binding | 7.22E-03 |
| 48 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 7.69E-03 |
| 49 | GO:0003756: protein disulfide isomerase activity | 8.66E-03 |
| 50 | GO:0047134: protein-disulfide reductase activity | 9.17E-03 |
| 51 | GO:0016491: oxidoreductase activity | 1.03E-02 |
| 52 | GO:0005355: glucose transmembrane transporter activity | 1.07E-02 |
| 53 | GO:0004791: thioredoxin-disulfide reductase activity | 1.07E-02 |
| 54 | GO:0016853: isomerase activity | 1.07E-02 |
| 55 | GO:0019901: protein kinase binding | 1.13E-02 |
| 56 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.30E-02 |
| 57 | GO:0051015: actin filament binding | 1.30E-02 |
| 58 | GO:0008168: methyltransferase activity | 1.44E-02 |
| 59 | GO:0016168: chlorophyll binding | 1.60E-02 |
| 60 | GO:0008236: serine-type peptidase activity | 1.79E-02 |
| 61 | GO:0030145: manganese ion binding | 2.05E-02 |
| 62 | GO:0016787: hydrolase activity | 2.13E-02 |
| 63 | GO:0003746: translation elongation factor activity | 2.19E-02 |
| 64 | GO:0003993: acid phosphatase activity | 2.26E-02 |
| 65 | GO:0050661: NADP binding | 2.41E-02 |
| 66 | GO:0005198: structural molecule activity | 2.85E-02 |
| 67 | GO:0031625: ubiquitin protein ligase binding | 3.49E-02 |
| 68 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.91E-02 |
| 69 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.91E-02 |
| 70 | GO:0022857: transmembrane transporter activity | 4.00E-02 |
| 71 | GO:0003779: actin binding | 4.09E-02 |
| 72 | GO:0051082: unfolded protein binding | 4.17E-02 |
| 73 | GO:0016746: transferase activity, transferring acyl groups | 4.26E-02 |
| 74 | GO:0015035: protein disulfide oxidoreductase activity | 4.26E-02 |
| 75 | GO:0008026: ATP-dependent helicase activity | 4.35E-02 |
| 76 | GO:0003729: mRNA binding | 4.36E-02 |
| 77 | GO:0019843: rRNA binding | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0043235: receptor complex | 0.00E+00 |
| 3 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 7.28E-28 |
| 5 | GO:0009534: chloroplast thylakoid | 4.64E-20 |
| 6 | GO:0009570: chloroplast stroma | 1.78E-14 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 6.86E-14 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 2.73E-10 |
| 9 | GO:0009941: chloroplast envelope | 2.26E-08 |
| 10 | GO:0031977: thylakoid lumen | 5.79E-07 |
| 11 | GO:0010287: plastoglobule | 6.24E-06 |
| 12 | GO:0009579: thylakoid | 1.46E-05 |
| 13 | GO:0009515: granal stacked thylakoid | 1.20E-04 |
| 14 | GO:0031361: integral component of thylakoid membrane | 1.20E-04 |
| 15 | GO:0031304: intrinsic component of mitochondrial inner membrane | 2.77E-04 |
| 16 | GO:0043036: starch grain | 2.77E-04 |
| 17 | GO:0030095: chloroplast photosystem II | 2.94E-04 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 4.51E-04 |
| 19 | GO:0010007: magnesium chelatase complex | 4.58E-04 |
| 20 | GO:0033281: TAT protein transport complex | 4.58E-04 |
| 21 | GO:0032432: actin filament bundle | 6.57E-04 |
| 22 | GO:0019898: extrinsic component of membrane | 9.17E-04 |
| 23 | GO:0055035: plastid thylakoid membrane | 1.10E-03 |
| 24 | GO:0030529: intracellular ribonucleoprotein complex | 1.39E-03 |
| 25 | GO:0009533: chloroplast stromal thylakoid | 1.89E-03 |
| 26 | GO:0009538: photosystem I reaction center | 2.19E-03 |
| 27 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.50E-03 |
| 28 | GO:0042644: chloroplast nucleoid | 2.82E-03 |
| 29 | GO:0008180: COP9 signalosome | 2.82E-03 |
| 30 | GO:0031969: chloroplast membrane | 3.23E-03 |
| 31 | GO:0055028: cortical microtubule | 3.51E-03 |
| 32 | GO:0005884: actin filament | 3.88E-03 |
| 33 | GO:0032040: small-subunit processome | 4.26E-03 |
| 34 | GO:0016602: CCAAT-binding factor complex | 4.64E-03 |
| 35 | GO:0009508: plastid chromosome | 4.64E-03 |
| 36 | GO:0005623: cell | 7.17E-03 |
| 37 | GO:0009532: plastid stroma | 7.22E-03 |
| 38 | GO:0009522: photosystem I | 1.07E-02 |
| 39 | GO:0016020: membrane | 1.26E-02 |
| 40 | GO:0009295: nucleoid | 1.41E-02 |
| 41 | GO:0005618: cell wall | 1.80E-02 |
| 42 | GO:0019005: SCF ubiquitin ligase complex | 1.85E-02 |
| 43 | GO:0005773: vacuole | 2.94E-02 |
| 44 | GO:0000502: proteasome complex | 3.25E-02 |
| 45 | GO:0009536: plastid | 3.44E-02 |
| 46 | GO:0005887: integral component of plasma membrane | 3.72E-02 |