Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G49580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006792: regulation of sulfur utilization0.00E+00
2GO:0010439: regulation of glucosinolate biosynthetic process1.36E-06
3GO:0080164: regulation of nitric oxide metabolic process9.64E-06
4GO:0055063: sulfate ion homeostasis9.64E-06
5GO:0046500: S-adenosylmethionine metabolic process9.64E-06
6GO:0051592: response to calcium ion2.58E-05
7GO:0042542: response to hydrogen peroxide1.17E-04
8GO:0010438: cellular response to sulfur starvation1.30E-04
9GO:0006544: glycine metabolic process1.30E-04
10GO:0006563: L-serine metabolic process1.63E-04
11GO:0009612: response to mechanical stimulus1.98E-04
12GO:0009554: megasporogenesis1.98E-04
13GO:0010038: response to metal ion2.34E-04
14GO:0030162: regulation of proteolysis2.72E-04
15GO:0044030: regulation of DNA methylation3.11E-04
16GO:2000031: regulation of salicylic acid mediated signaling pathway3.11E-04
17GO:0048574: long-day photoperiodism, flowering3.11E-04
18GO:0035999: tetrahydrofolate interconversion3.93E-04
19GO:0009733: response to auxin5.24E-04
20GO:0010540: basipetal auxin transport6.14E-04
21GO:0010200: response to chitin8.15E-04
22GO:2000022: regulation of jasmonic acid mediated signaling pathway9.08E-04
23GO:0040007: growth9.61E-04
24GO:0009751: response to salicylic acid1.12E-03
25GO:0009646: response to absence of light1.23E-03
26GO:0006357: regulation of transcription from RNA polymerase II promoter1.49E-03
27GO:0001666: response to hypoxia1.72E-03
28GO:0010411: xyloglucan metabolic process1.92E-03
29GO:0009611: response to wounding2.03E-03
30GO:0006865: amino acid transport2.33E-03
31GO:0045087: innate immune response2.40E-03
32GO:0042546: cell wall biogenesis2.93E-03
33GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.24E-03
34GO:0009909: regulation of flower development3.74E-03
35GO:0030154: cell differentiation4.32E-03
36GO:0009409: response to cold5.35E-03
37GO:0046686: response to cadmium ion6.16E-03
38GO:0009739: response to gibberellin6.98E-03
39GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.98E-03
40GO:0009737: response to abscisic acid8.42E-03
41GO:0009658: chloroplast organization8.74E-03
42GO:0009723: response to ethylene9.69E-03
43GO:0045454: cell redox homeostasis1.15E-02
44GO:0009408: response to heat1.34E-02
45GO:0009753: response to jasmonic acid1.41E-02
46GO:0009734: auxin-activated signaling pathway1.71E-02
47GO:0009738: abscisic acid-activated signaling pathway1.96E-02
48GO:0035556: intracellular signal transduction2.09E-02
49GO:0006952: defense response2.21E-02
50GO:0009414: response to water deprivation3.27E-02
51GO:0071555: cell wall organization3.33E-02
52GO:0042742: defense response to bacterium3.33E-02
RankGO TermAdjusted P value
1GO:0004372: glycine hydroxymethyltransferase activity1.30E-04
2GO:0018685: alkane 1-monooxygenase activity1.30E-04
3GO:0003712: transcription cofactor activity6.61E-04
4GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting9.35E-04
5GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.03E-03
6GO:0004402: histone acetyltransferase activity1.12E-03
7GO:0016762: xyloglucan:xyloglucosyl transferase activity1.35E-03
8GO:0016798: hydrolase activity, acting on glycosyl bonds1.92E-03
9GO:0005509: calcium ion binding3.66E-03
10GO:0015171: amino acid transmembrane transporter activity3.74E-03
11GO:0031625: ubiquitin protein ligase binding3.74E-03
12GO:0044212: transcription regulatory region DNA binding3.96E-03
13GO:0030170: pyridoxal phosphate binding5.55E-03
14GO:0043531: ADP binding9.33E-03
15GO:0043565: sequence-specific DNA binding2.03E-02
16GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.45E-02
17GO:0019825: oxygen binding2.59E-02
18GO:0005516: calmodulin binding2.69E-02
19GO:0005506: iron ion binding3.29E-02
20GO:0004672: protein kinase activity4.38E-02
21GO:0020037: heme binding4.61E-02
RankGO TermAdjusted P value
1GO:0031303: integral component of endosome membrane0.00E+00
2GO:0090568: nuclear transcriptional repressor complex0.00E+00
3GO:0015629: actin cytoskeleton9.61E-04
4GO:0019005: SCF ubiquitin ligase complex2.05E-03
5GO:0012505: endomembrane system4.34E-03
6GO:0005615: extracellular space6.98E-03
7GO:0043231: intracellular membrane-bounded organelle1.43E-02
8GO:0048046: apoplast1.44E-02
9GO:0031225: anchored component of membrane2.76E-02
10GO:0009505: plant-type cell wall3.91E-02
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Gene type



Gene DE type