Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G49010

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044843: cell cycle G1/S phase transition0.00E+00
2GO:0006412: translation2.45E-136
3GO:0042254: ribosome biogenesis7.79E-42
4GO:0000027: ribosomal large subunit assembly3.34E-11
5GO:0000028: ribosomal small subunit assembly6.60E-09
6GO:0009955: adaxial/abaxial pattern specification4.50E-07
7GO:0009735: response to cytokinin9.91E-07
8GO:0002181: cytoplasmic translation3.53E-06
9GO:0042274: ribosomal small subunit biogenesis1.55E-05
10GO:0006364: rRNA processing5.35E-05
11GO:0006407: rRNA export from nucleus1.37E-04
12GO:0030490: maturation of SSU-rRNA1.37E-04
13GO:0000494: box C/D snoRNA 3'-end processing1.37E-04
14GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.37E-04
15GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.37E-04
16GO:1990258: histone glutamine methylation1.37E-04
17GO:0009793: embryo development ending in seed dormancy2.25E-04
18GO:0048569: post-embryonic animal organ development3.16E-04
19GO:0055129: L-proline biosynthetic process3.16E-04
20GO:0009967: positive regulation of signal transduction3.16E-04
21GO:0009965: leaf morphogenesis4.68E-04
22GO:0010476: gibberellin mediated signaling pathway5.20E-04
23GO:0042256: mature ribosome assembly5.20E-04
24GO:0090506: axillary shoot meristem initiation5.20E-04
25GO:0040007: growth7.07E-04
26GO:0070301: cellular response to hydrogen peroxide7.44E-04
27GO:0006241: CTP biosynthetic process7.44E-04
28GO:0006165: nucleoside diphosphate phosphorylation7.44E-04
29GO:0006228: UTP biosynthetic process7.44E-04
30GO:2000032: regulation of secondary shoot formation9.85E-04
31GO:0006183: GTP biosynthetic process9.85E-04
32GO:0071493: cellular response to UV-B1.25E-03
33GO:0031167: rRNA methylation1.25E-03
34GO:0006561: proline biosynthetic process1.53E-03
35GO:0000470: maturation of LSU-rRNA1.53E-03
36GO:0000911: cytokinesis by cell plate formation1.83E-03
37GO:0009423: chorismate biosynthetic process1.83E-03
38GO:0001558: regulation of cell growth2.85E-03
39GO:0001510: RNA methylation2.85E-03
40GO:0008283: cell proliferation3.54E-03
41GO:0009644: response to high light intensity3.82E-03
42GO:0009409: response to cold3.91E-03
43GO:0009073: aromatic amino acid family biosynthetic process4.42E-03
44GO:0010015: root morphogenesis4.42E-03
45GO:0006913: nucleocytoplasmic transport4.42E-03
46GO:0006820: anion transport4.85E-03
47GO:0006626: protein targeting to mitochondrion5.30E-03
48GO:0010229: inflorescence development5.30E-03
49GO:0010102: lateral root morphogenesis5.30E-03
50GO:0009651: response to salt stress6.13E-03
51GO:0030150: protein import into mitochondrial matrix7.22E-03
52GO:0051302: regulation of cell division7.73E-03
53GO:0015992: proton transport8.26E-03
54GO:0071215: cellular response to abscisic acid stimulus9.35E-03
55GO:0008033: tRNA processing1.11E-02
56GO:0009749: response to glucose1.29E-02
57GO:0009791: post-embryonic development1.29E-02
58GO:0032502: developmental process1.42E-02
59GO:0010090: trichome morphogenesis1.49E-02
60GO:0010252: auxin homeostasis1.55E-02
61GO:0046686: response to cadmium ion1.77E-02
62GO:0006811: ion transport2.28E-02
63GO:0006414: translational elongation2.32E-02
64GO:0010043: response to zinc ion2.36E-02
65GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.45E-02
66GO:0006417: regulation of translation4.00E-02
67GO:0009620: response to fungus4.49E-02
RankGO TermAdjusted P value
1GO:0004735: pyrroline-5-carboxylate reductase activity0.00E+00
2GO:0004107: chorismate synthase activity0.00E+00
3GO:0003735: structural constituent of ribosome2.13E-158
4GO:0003729: mRNA binding1.49E-39
5GO:0019843: rRNA binding1.61E-11
6GO:0008097: 5S rRNA binding8.27E-06
7GO:1990259: histone-glutamine methyltransferase activity1.37E-04
8GO:0003723: RNA binding1.64E-04
9GO:0005078: MAP-kinase scaffold activity3.16E-04
10GO:0008649: rRNA methyltransferase activity5.20E-04
11GO:0032947: protein complex scaffold5.20E-04
12GO:0070181: small ribosomal subunit rRNA binding5.20E-04
13GO:0004550: nucleoside diphosphate kinase activity7.44E-04
14GO:0008235: metalloexopeptidase activity2.15E-03
15GO:0030515: snoRNA binding2.15E-03
16GO:0015288: porin activity2.49E-03
17GO:0008308: voltage-gated anion channel activity2.85E-03
18GO:0015266: protein channel activity5.30E-03
19GO:0010181: FMN binding1.23E-02
20GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.12E-02
21GO:0003746: translation elongation factor activity2.51E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome2.46E-127
2GO:0022625: cytosolic large ribosomal subunit7.05E-97
3GO:0005840: ribosome1.15E-82
4GO:0022627: cytosolic small ribosomal subunit1.92E-60
5GO:0005730: nucleolus1.34E-43
6GO:0005829: cytosol1.75E-39
7GO:0005737: cytoplasm2.29E-35
8GO:0009506: plasmodesma1.66E-34
9GO:0015934: large ribosomal subunit1.34E-28
10GO:0016020: membrane2.20E-18
11GO:0005774: vacuolar membrane4.47E-15
12GO:0005618: cell wall1.99E-13
13GO:0015935: small ribosomal subunit5.31E-13
14GO:0005773: vacuole2.39E-12
15GO:0005886: plasma membrane7.98E-09
16GO:0009507: chloroplast3.45E-07
17GO:0030686: 90S preribosome1.37E-04
18GO:0015030: Cajal body1.73E-04
19GO:0005853: eukaryotic translation elongation factor 1 complex5.20E-04
20GO:0005682: U5 snRNP9.85E-04
21GO:0005687: U4 snRNP1.25E-03
22GO:0031428: box C/D snoRNP complex1.53E-03
23GO:0005622: intracellular1.83E-03
24GO:0071004: U2-type prespliceosome2.49E-03
25GO:0046930: pore complex2.85E-03
26GO:0046540: U4/U6 x U5 tri-snRNP complex2.85E-03
27GO:0005742: mitochondrial outer membrane translocase complex2.85E-03
28GO:0005685: U1 snRNP3.22E-03
29GO:0005686: U2 snRNP4.00E-03
30GO:0071013: catalytic step 2 spliceosome4.42E-03
31GO:0032040: small-subunit processome4.85E-03
32GO:0019013: viral nucleocapsid5.30E-03
33GO:0005741: mitochondrial outer membrane8.26E-03
34GO:0016592: mediator complex1.42E-02
35GO:0030529: intracellular ribonucleoprotein complex1.76E-02
36GO:0005834: heterotrimeric G-protein complex4.39E-02
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Gene type



Gene DE type