co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G48850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046865: terpenoid transport	0.00E+00
2	GO:0080053: response to phenylalanine	0.00E+00
3	GO:0051238: sequestering of metal ion	0.00E+00
4	GO:0006182: cGMP biosynthetic process	0.00E+00
5	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
6	GO:0010055: atrichoblast differentiation	0.00E+00
7	GO:0043201: response to leucine	0.00E+00
8	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
9	GO:0080052: response to histidine	0.00E+00
10	GO:0042742: defense response to bacterium	7.89E-07
11	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.81E-06
12	GO:0009617: response to bacterium	1.82E-06
13	GO:0071456: cellular response to hypoxia	3.70E-06
14	GO:0006952: defense response	1.90E-05
15	GO:0009620: response to fungus	3.44E-05
16	GO:0009817: defense response to fungus, incompatible interaction	5.14E-05
17	GO:0010200: response to chitin	8.61E-05
18	GO:0002238: response to molecule of fungal origin	9.33E-05
19	GO:0006855: drug transmembrane transport	1.68E-04
20	GO:0009751: response to salicylic acid	1.93E-04
21	GO:0042759: long-chain fatty acid biosynthetic process	2.39E-04
22	GO:0032107: regulation of response to nutrient levels	2.39E-04
23	GO:0051938: L-glutamate import	2.39E-04
24	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.39E-04
25	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.39E-04
26	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.39E-04
27	GO:0010193: response to ozone	2.51E-04
28	GO:0010120: camalexin biosynthetic process	2.67E-04
29	GO:0009682: induced systemic resistance	5.19E-04
30	GO:0030003: cellular cation homeostasis	5.29E-04
31	GO:0043066: negative regulation of apoptotic process	5.29E-04
32	GO:0042939: tripeptide transport	5.29E-04
33	GO:0043091: L-arginine import	5.29E-04
34	GO:0009838: abscission	5.29E-04
35	GO:0015802: basic amino acid transport	5.29E-04
36	GO:0009805: coumarin biosynthetic process	5.29E-04
37	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	5.29E-04
38	GO:0044419: interspecies interaction between organisms	5.29E-04
39	GO:0006423: cysteinyl-tRNA aminoacylation	5.29E-04
40	GO:0080168: abscisic acid transport	8.60E-04
41	GO:0034051: negative regulation of plant-type hypersensitive response	8.60E-04
42	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	8.60E-04
43	GO:0015692: lead ion transport	8.60E-04
44	GO:0010150: leaf senescence	8.84E-04
45	GO:0051707: response to other organism	1.07E-03
46	GO:0006874: cellular calcium ion homeostasis	1.14E-03
47	GO:0046513: ceramide biosynthetic process	1.23E-03
48	GO:0046836: glycolipid transport	1.23E-03
49	GO:0019438: aromatic compound biosynthetic process	1.23E-03
50	GO:0070301: cellular response to hydrogen peroxide	1.23E-03
51	GO:0003333: amino acid transmembrane transport	1.25E-03
52	GO:0010227: floral organ abscission	1.48E-03
53	GO:1901002: positive regulation of response to salt stress	1.64E-03
54	GO:0042938: dipeptide transport	1.64E-03
55	GO:0006468: protein phosphorylation	1.91E-03
56	GO:0000304: response to singlet oxygen	2.09E-03
57	GO:0034052: positive regulation of plant-type hypersensitive response	2.09E-03
58	GO:0009723: response to ethylene	2.13E-03
59	GO:0002229: defense response to oomycetes	2.50E-03
60	GO:0006561: proline biosynthetic process	2.57E-03
61	GO:0010942: positive regulation of cell death	2.57E-03
62	GO:0015691: cadmium ion transport	2.57E-03
63	GO:0010256: endomembrane system organization	2.57E-03
64	GO:0050832: defense response to fungus	2.90E-03
65	GO:0051607: defense response to virus	3.41E-03
66	GO:0009615: response to virus	3.61E-03
67	GO:0050829: defense response to Gram-negative bacterium	3.64E-03
68	GO:0042773: ATP synthesis coupled electron transport	3.64E-03
69	GO:1900057: positive regulation of leaf senescence	3.64E-03
70	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.64E-03
71	GO:1900056: negative regulation of leaf senescence	3.64E-03
72	GO:0019745: pentacyclic triterpenoid biosynthetic process	3.64E-03
73	GO:0007165: signal transduction	3.81E-03
74	GO:0009627: systemic acquired resistance	4.03E-03
75	GO:0030091: protein repair	4.23E-03
76	GO:0009850: auxin metabolic process	4.23E-03
77	GO:0043068: positive regulation of programmed cell death	4.23E-03
78	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.23E-03
79	GO:0009642: response to light intensity	4.23E-03
80	GO:0008219: cell death	4.70E-03
81	GO:0010204: defense response signaling pathway, resistance gene-independent	4.84E-03
82	GO:0009699: phenylpropanoid biosynthetic process	4.84E-03
83	GO:0009407: toxin catabolic process	5.18E-03
84	GO:0009821: alkaloid biosynthetic process	5.48E-03
85	GO:0051865: protein autoubiquitination	5.48E-03
86	GO:0010112: regulation of systemic acquired resistance	5.48E-03
87	GO:0007166: cell surface receptor signaling pathway	5.75E-03
88	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.15E-03
89	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.85E-03
90	GO:0006032: chitin catabolic process	6.85E-03
91	GO:0009089: lysine biosynthetic process via diaminopimelate	7.58E-03
92	GO:0009073: aromatic amino acid family biosynthetic process	7.58E-03
93	GO:0000272: polysaccharide catabolic process	7.58E-03
94	GO:0006816: calcium ion transport	7.58E-03
95	GO:0000266: mitochondrial fission	8.33E-03
96	GO:0006790: sulfur compound metabolic process	8.33E-03
97	GO:0012501: programmed cell death	8.33E-03
98	GO:0002213: defense response to insect	8.33E-03
99	GO:0009636: response to toxic substance	8.64E-03
100	GO:0055046: microgametogenesis	9.11E-03
101	GO:0009718: anthocyanin-containing compound biosynthetic process	9.11E-03
102	GO:0010102: lateral root morphogenesis	9.11E-03
103	GO:0006979: response to oxidative stress	9.21E-03
104	GO:0042538: hyperosmotic salinity response	9.65E-03
105	GO:0010143: cutin biosynthetic process	9.92E-03
106	GO:0009611: response to wounding	1.06E-02
107	GO:0070588: calcium ion transmembrane transport	1.07E-02
108	GO:0046854: phosphatidylinositol phosphorylation	1.07E-02
109	GO:0010025: wax biosynthetic process	1.16E-02
110	GO:0080147: root hair cell development	1.25E-02
111	GO:0005992: trehalose biosynthetic process	1.25E-02
112	GO:0030150: protein import into mitochondrial matrix	1.25E-02
113	GO:0009626: plant-type hypersensitive response	1.31E-02
114	GO:0016998: cell wall macromolecule catabolic process	1.43E-02
115	GO:0019748: secondary metabolic process	1.53E-02
116	GO:0010584: pollen exine formation	1.72E-02
117	GO:0009561: megagametogenesis	1.72E-02
118	GO:0032259: methylation	1.73E-02
119	GO:0042631: cellular response to water deprivation	1.93E-02
120	GO:0009753: response to jasmonic acid	1.99E-02
121	GO:0006885: regulation of pH	2.03E-02
122	GO:0006623: protein targeting to vacuole	2.25E-02
123	GO:0045490: pectin catabolic process	2.56E-02
124	GO:0010252: auxin homeostasis	2.71E-02
125	GO:0009816: defense response to bacterium, incompatible interaction	3.19E-02
126	GO:0009607: response to biotic stimulus	3.19E-02
127	GO:0006499: N-terminal protein myristoylation	3.97E-02
128	GO:0048527: lateral root development	4.11E-02
129	GO:0007568: aging	4.11E-02
130	GO:0006865: amino acid transport	4.25E-02
131	GO:0009867: jasmonic acid mediated signaling pathway	4.39E-02
132	GO:0045087: innate immune response	4.39E-02
133	GO:0009853: photorespiration	4.39E-02
134	GO:0045893: positive regulation of transcription, DNA-templated	4.42E-02
135	GO:0055114: oxidation-reduction process	4.47E-02
136	GO:0006631: fatty acid metabolic process	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0003796: lysozyme activity	0.00E+00
2	GO:1990837: sequence-specific double-stranded DNA binding	0.00E+00
3	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
4	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.78E-05
5	GO:0004674: protein serine/threonine kinase activity	1.64E-04
6	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.39E-04
7	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.39E-04
8	GO:0016301: kinase activity	2.99E-04
9	GO:0050660: flavin adenine dinucleotide binding	4.30E-04
10	GO:0042937: tripeptide transporter activity	5.29E-04
11	GO:0004103: choline kinase activity	5.29E-04
12	GO:0050291: sphingosine N-acyltransferase activity	5.29E-04
13	GO:0004817: cysteine-tRNA ligase activity	5.29E-04
14	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	5.29E-04
15	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	5.42E-04
16	GO:0015238: drug transmembrane transporter activity	6.15E-04
17	GO:0005217: intracellular ligand-gated ion channel activity	8.45E-04
18	GO:0004970: ionotropic glutamate receptor activity	8.45E-04
19	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	8.60E-04
20	GO:0004383: guanylate cyclase activity	8.60E-04
21	GO:0009055: electron carrier activity	1.09E-03
22	GO:0042299: lupeol synthase activity	1.23E-03
23	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.23E-03
24	GO:0015189: L-lysine transmembrane transporter activity	1.23E-03
25	GO:0017089: glycolipid transporter activity	1.23E-03
26	GO:0015181: arginine transmembrane transporter activity	1.23E-03
27	GO:0016866: intramolecular transferase activity	1.64E-03
28	GO:0010279: indole-3-acetic acid amido synthetase activity	1.64E-03
29	GO:0004737: pyruvate decarboxylase activity	1.64E-03
30	GO:0042936: dipeptide transporter activity	1.64E-03
31	GO:0051861: glycolipid binding	1.64E-03
32	GO:0005313: L-glutamate transmembrane transporter activity	1.64E-03
33	GO:0045735: nutrient reservoir activity	1.91E-03
34	GO:0005496: steroid binding	2.09E-03
35	GO:0004866: endopeptidase inhibitor activity	2.57E-03
36	GO:0030976: thiamine pyrophosphate binding	2.57E-03
37	GO:0005524: ATP binding	3.01E-03
38	GO:0004656: procollagen-proline 4-dioxygenase activity	3.09E-03
39	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.09E-03
40	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.09E-03
41	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.09E-03
42	GO:0102391: decanoate--CoA ligase activity	3.09E-03
43	GO:0005261: cation channel activity	3.09E-03
44	GO:0005085: guanyl-nucleotide exchange factor activity	3.64E-03
45	GO:0004467: long-chain fatty acid-CoA ligase activity	3.64E-03
46	GO:0016831: carboxy-lyase activity	3.64E-03
47	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.23E-03
48	GO:0030247: polysaccharide binding	4.25E-03
49	GO:0015297: antiporter activity	4.57E-03
50	GO:0030145: manganese ion binding	5.43E-03
51	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.96E-03
52	GO:0016844: strictosidine synthase activity	6.15E-03
53	GO:0015174: basic amino acid transmembrane transporter activity	6.15E-03
54	GO:0004568: chitinase activity	6.85E-03
55	GO:0008171: O-methyltransferase activity	6.85E-03
56	GO:0004364: glutathione transferase activity	7.38E-03
57	GO:0004022: alcohol dehydrogenase (NAD) activity	9.11E-03
58	GO:0005262: calcium channel activity	9.11E-03
59	GO:0005388: calcium-transporting ATPase activity	9.11E-03
60	GO:0015266: protein channel activity	9.11E-03
61	GO:0015171: amino acid transmembrane transporter activity	1.15E-02
62	GO:0051536: iron-sulfur cluster binding	1.25E-02
63	GO:0031418: L-ascorbic acid binding	1.25E-02
64	GO:0003954: NADH dehydrogenase activity	1.25E-02
65	GO:0001046: core promoter sequence-specific DNA binding	1.25E-02
66	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.72E-02
67	GO:0005102: receptor binding	1.82E-02
68	GO:0005451: monovalent cation:proton antiporter activity	1.93E-02
69	GO:0005199: structural constituent of cell wall	2.03E-02
70	GO:0015299: solute:proton antiporter activity	2.14E-02
71	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.36E-02
72	GO:0015385: sodium:proton antiporter activity	2.59E-02
73	GO:0005509: calcium ion binding	2.61E-02
74	GO:0008237: metallopeptidase activity	2.83E-02
75	GO:0008483: transaminase activity	2.83E-02
76	GO:0051213: dioxygenase activity	3.07E-02
77	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.26E-02
78	GO:0005215: transporter activity	3.40E-02
79	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.71E-02
80	GO:0008168: methyltransferase activity	3.81E-02
81	GO:0043531: ADP binding	4.34E-02
82	GO:0008422: beta-glucosidase activity	4.67E-02
83	GO:0004842: ubiquitin-protein transferase activity	4.68E-02
84	GO:0051539: 4 iron, 4 sulfur cluster binding	4.81E-02
85	GO:0050661: NADP binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.77E-06
2	GO:0016021: integral component of membrane	7.70E-06
3	GO:0009530: primary cell wall	8.60E-04
4	GO:0005770: late endosome	2.03E-03
5	GO:0032588: trans-Golgi network membrane	2.57E-03
6	GO:0005576: extracellular region	4.06E-03
7	GO:0031305: integral component of mitochondrial inner membrane	4.23E-03
8	GO:0005615: extracellular space	5.60E-03
9	GO:0005783: endoplasmic reticulum	8.85E-03
10	GO:0031966: mitochondrial membrane	9.65E-03
11	GO:0045271: respiratory chain complex I	1.34E-02
12	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.72E-02
13	GO:0071944: cell periphery	2.59E-02
14	GO:0000325: plant-type vacuole	4.11E-02