Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G48560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090393: sepal giant cell development0.00E+00
2GO:0006518: peptide metabolic process4.33E-05
3GO:0032877: positive regulation of DNA endoreduplication6.64E-05
4GO:0031122: cytoplasmic microtubule organization9.27E-05
5GO:0007155: cell adhesion2.54E-04
6GO:0000902: cell morphogenesis3.29E-04
7GO:0019538: protein metabolic process4.07E-04
8GO:0009725: response to hormone5.33E-04
9GO:0009767: photosynthetic electron transport chain5.33E-04
10GO:0009969: xyloglucan biosynthetic process6.20E-04
11GO:0080092: regulation of pollen tube growth8.54E-04
12GO:0006520: cellular amino acid metabolic process1.10E-03
13GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.67E-03
14GO:0006839: mitochondrial transport2.46E-03
15GO:0009744: response to sucrose2.67E-03
16GO:0006810: transport5.25E-03
17GO:0007623: circadian rhythm6.03E-03
18GO:0009739: response to gibberellin6.51E-03
19GO:0009860: pollen tube growth8.59E-03
20GO:0007049: cell cycle8.81E-03
21GO:0009723: response to ethylene9.03E-03
22GO:0046777: protein autophosphorylation9.94E-03
23GO:0045454: cell redox homeostasis1.08E-02
24GO:0009651: response to salt stress1.20E-02
25GO:0009751: response to salicylic acid1.24E-02
26GO:0009753: response to jasmonic acid1.31E-02
27GO:0006357: regulation of transcription from RNA polymerase II promoter1.52E-02
28GO:0055085: transmembrane transport2.22E-02
29GO:0071555: cell wall organization3.10E-02
30GO:0042742: defense response to bacterium3.10E-02
31GO:0030154: cell differentiation3.30E-02
32GO:0009733: response to auxin3.37E-02
33GO:0005975: carbohydrate metabolic process4.18E-02
34GO:0046686: response to cadmium ion4.26E-02
RankGO TermAdjusted P value
1GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
2GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
3GO:0008568: microtubule-severing ATPase activity8.86E-06
4GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.85E-04
5GO:0005089: Rho guanyl-nucleotide exchange factor activity4.48E-04
6GO:0004860: protein kinase inhibitor activity4.48E-04
7GO:0008378: galactosyltransferase activity4.90E-04
8GO:0042973: glucan endo-1,3-beta-D-glucosidase activity5.76E-04
9GO:0004872: receptor activity1.21E-03
10GO:0004222: metalloendopeptidase activity2.05E-03
11GO:0015035: protein disulfide oxidoreductase activity4.23E-03
12GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.08E-02
13GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.16E-02
14GO:0009055: electron carrier activity1.31E-02
15GO:0016887: ATPase activity1.70E-02
16GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.29E-02
17GO:0005509: calcium ion binding2.93E-02
18GO:0044212: transcription regulatory region DNA binding3.10E-02
19GO:0003824: catalytic activity3.31E-02
RankGO TermAdjusted P value
1GO:0009344: nitrite reductase complex [NAD(P)H]8.86E-06
2GO:0016324: apical plasma membrane4.07E-04
3GO:0030095: chloroplast photosystem II5.76E-04
4GO:0009654: photosystem II oxygen evolving complex7.58E-04
5GO:0009535: chloroplast thylakoid membrane1.08E-03
6GO:0019898: extrinsic component of membrane1.21E-03
7GO:0009534: chloroplast thylakoid2.16E-03
8GO:0009507: chloroplast4.64E-03
9GO:0009543: chloroplast thylakoid lumen4.83E-03
10GO:0046658: anchored component of plasma membrane7.32E-03
11GO:0005743: mitochondrial inner membrane1.19E-02
12GO:0009941: chloroplast envelope1.69E-02
13GO:0005576: extracellular region2.52E-02
14GO:0031225: anchored component of membrane2.57E-02
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Gene type



Gene DE type