Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G48360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010423: negative regulation of brassinosteroid biosynthetic process0.00E+00
2GO:0006792: regulation of sulfur utilization0.00E+00
3GO:0010200: response to chitin7.44E-08
4GO:0010438: cellular response to sulfur starvation6.15E-07
5GO:0010439: regulation of glucosinolate biosynthetic process2.71E-06
6GO:0009751: response to salicylic acid7.48E-06
7GO:0080164: regulation of nitric oxide metabolic process1.48E-05
8GO:0009611: response to wounding2.58E-05
9GO:0045717: negative regulation of fatty acid biosynthetic process3.88E-05
10GO:0051592: response to calcium ion3.88E-05
11GO:0071158: positive regulation of cell cycle arrest3.88E-05
12GO:0035066: positive regulation of histone acetylation6.95E-05
13GO:0009723: response to ethylene8.72E-05
14GO:0035067: negative regulation of histone acetylation1.05E-04
15GO:0034613: cellular protein localization1.45E-04
16GO:0046345: abscisic acid catabolic process1.45E-04
17GO:0009409: response to cold1.59E-04
18GO:0009753: response to jasmonic acid1.86E-04
19GO:0042542: response to hydrogen peroxide2.05E-04
20GO:0047484: regulation of response to osmotic stress2.34E-04
21GO:0006355: regulation of transcription, DNA-templated2.35E-04
22GO:0031347: regulation of defense response2.60E-04
23GO:0009612: response to mechanical stimulus2.82E-04
24GO:0009909: regulation of flower development3.21E-04
25GO:0010038: response to metal ion3.32E-04
26GO:0030162: regulation of proteolysis3.84E-04
27GO:0010099: regulation of photomorphogenesis4.37E-04
28GO:0048574: long-day photoperiodism, flowering4.37E-04
29GO:1903507: negative regulation of nucleic acid-templated transcription6.67E-04
30GO:0010540: basipetal auxin transport8.55E-04
31GO:0009934: regulation of meristem structural organization8.55E-04
32GO:0009733: response to auxin1.01E-03
33GO:0009658: chloroplast organization1.05E-03
34GO:0048366: leaf development1.23E-03
35GO:2000022: regulation of jasmonic acid mediated signaling pathway1.26E-03
36GO:0042127: regulation of cell proliferation1.41E-03
37GO:0045454: cell redox homeostasis1.54E-03
38GO:0009741: response to brassinosteroid1.65E-03
39GO:0010268: brassinosteroid homeostasis1.65E-03
40GO:0009646: response to absence of light1.73E-03
41GO:0016132: brassinosteroid biosynthetic process1.89E-03
42GO:0002229: defense response to oomycetes1.89E-03
43GO:0009639: response to red or far red light2.15E-03
44GO:0016125: sterol metabolic process2.15E-03
45GO:0019760: glucosinolate metabolic process2.15E-03
46GO:0009737: response to abscisic acid2.25E-03
47GO:0009873: ethylene-activated signaling pathway2.42E-03
48GO:0006357: regulation of transcription from RNA polymerase II promoter2.48E-03
49GO:0048573: photoperiodism, flowering2.70E-03
50GO:0048527: lateral root development3.20E-03
51GO:0045087: innate immune response3.40E-03
52GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.60E-03
53GO:0009585: red, far-red light phototransduction4.95E-03
54GO:0009414: response to water deprivation6.50E-03
55GO:0009742: brassinosteroid mediated signaling pathway6.57E-03
56GO:0030154: cell differentiation7.25E-03
57GO:0009845: seed germination7.79E-03
58GO:0006413: translational initiation8.79E-03
59GO:0007623: circadian rhythm9.23E-03
60GO:0009739: response to gibberellin9.99E-03
61GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process9.99E-03
62GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.19E-02
63GO:0006970: response to osmotic stress1.32E-02
64GO:0006351: transcription, DNA-templated1.48E-02
65GO:0006629: lipid metabolic process1.93E-02
66GO:0009408: response to heat1.93E-02
67GO:0006281: DNA repair1.93E-02
68GO:0009651: response to salt stress2.25E-02
69GO:0009734: auxin-activated signaling pathway2.46E-02
70GO:0035556: intracellular signal transduction3.01E-02
71GO:0045893: positive regulation of transcription, DNA-templated3.20E-02
72GO:0006952: defense response3.71E-02
73GO:0042742: defense response to bacterium4.79E-02
RankGO TermAdjusted P value
1GO:0010295: (+)-abscisic acid 8'-hydroxylase activity6.95E-05
2GO:0004860: protein kinase inhibitor activity6.67E-04
3GO:0003712: transcription cofactor activity9.19E-04
4GO:0003714: transcription corepressor activity1.05E-03
5GO:0003700: transcription factor activity, sequence-specific DNA binding1.16E-03
6GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.54E-03
7GO:0004402: histone acetyltransferase activity1.57E-03
8GO:0003677: DNA binding1.62E-03
9GO:0003713: transcription coactivator activity1.65E-03
10GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.71E-03
11GO:0031625: ubiquitin protein ligase binding5.31E-03
12GO:0005515: protein binding5.53E-03
13GO:0015035: protein disulfide oxidoreductase activity6.44E-03
14GO:0044212: transcription regulatory region DNA binding6.66E-03
15GO:0043565: sequence-specific DNA binding6.80E-03
16GO:0004842: ubiquitin-protein transferase activity9.21E-03
17GO:0003743: translation initiation factor activity1.03E-02
18GO:0046982: protein heterodimerization activity1.24E-02
19GO:0009055: electron carrier activity2.02E-02
20GO:0019825: oxygen binding3.73E-02
21GO:0005516: calmodulin binding3.88E-02
22GO:0005509: calcium ion binding4.53E-02
23GO:0005506: iron ion binding4.74E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0031436: BRCA1-BARD1 complex1.48E-05
3GO:0070531: BRCA1-A complex6.95E-05
4GO:0005634: nucleus9.24E-04
5GO:0015629: actin cytoskeleton1.34E-03
6GO:0019005: SCF ubiquitin ligase complex2.90E-03
7GO:0005615: extracellular space9.99E-03
8GO:0005622: intracellular4.37E-02
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Gene type



Gene DE type