GO Enrichment Analysis of Co-expressed Genes with
AT3G47560
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0042493: response to drug | 0.00E+00 |
2 | GO:0042371: vitamin K biosynthetic process | 0.00E+00 |
3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
4 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
5 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
6 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
7 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
8 | GO:0033494: ferulate metabolic process | 0.00E+00 |
9 | GO:0006642: triglyceride mobilization | 0.00E+00 |
10 | GO:0006223: uracil salvage | 0.00E+00 |
11 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
12 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
13 | GO:0006412: translation | 7.40E-13 |
14 | GO:0042254: ribosome biogenesis | 1.48E-10 |
15 | GO:0009658: chloroplast organization | 6.58E-08 |
16 | GO:0015976: carbon utilization | 1.15E-07 |
17 | GO:0032544: plastid translation | 3.33E-06 |
18 | GO:0010207: photosystem II assembly | 2.15E-05 |
19 | GO:0010037: response to carbon dioxide | 2.51E-05 |
20 | GO:2000122: negative regulation of stomatal complex development | 2.51E-05 |
21 | GO:0009735: response to cytokinin | 3.85E-05 |
22 | GO:0010236: plastoquinone biosynthetic process | 4.05E-05 |
23 | GO:0006633: fatty acid biosynthetic process | 4.94E-05 |
24 | GO:0042372: phylloquinone biosynthetic process | 8.36E-05 |
25 | GO:0009409: response to cold | 1.54E-04 |
26 | GO:0043489: RNA stabilization | 1.82E-04 |
27 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 1.82E-04 |
28 | GO:0010442: guard cell morphogenesis | 1.82E-04 |
29 | GO:0000481: maturation of 5S rRNA | 1.82E-04 |
30 | GO:1902458: positive regulation of stomatal opening | 1.82E-04 |
31 | GO:0034337: RNA folding | 1.82E-04 |
32 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.82E-04 |
33 | GO:0010206: photosystem II repair | 2.17E-04 |
34 | GO:0010027: thylakoid membrane organization | 2.47E-04 |
35 | GO:0015979: photosynthesis | 3.04E-04 |
36 | GO:0045454: cell redox homeostasis | 3.32E-04 |
37 | GO:0043085: positive regulation of catalytic activity | 3.54E-04 |
38 | GO:0071258: cellular response to gravity | 4.10E-04 |
39 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 4.10E-04 |
40 | GO:0052541: plant-type cell wall cellulose metabolic process | 4.10E-04 |
41 | GO:0006006: glucose metabolic process | 4.63E-04 |
42 | GO:0019253: reductive pentose-phosphate cycle | 5.21E-04 |
43 | GO:0010020: chloroplast fission | 5.21E-04 |
44 | GO:2001295: malonyl-CoA biosynthetic process | 6.69E-04 |
45 | GO:0032504: multicellular organism reproduction | 6.69E-04 |
46 | GO:0010581: regulation of starch biosynthetic process | 6.69E-04 |
47 | GO:0019563: glycerol catabolic process | 6.69E-04 |
48 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 9.55E-04 |
49 | GO:2001141: regulation of RNA biosynthetic process | 9.55E-04 |
50 | GO:0006241: CTP biosynthetic process | 9.55E-04 |
51 | GO:0009650: UV protection | 9.55E-04 |
52 | GO:0006165: nucleoside diphosphate phosphorylation | 9.55E-04 |
53 | GO:0006228: UTP biosynthetic process | 9.55E-04 |
54 | GO:0006424: glutamyl-tRNA aminoacylation | 9.55E-04 |
55 | GO:0009411: response to UV | 1.02E-03 |
56 | GO:0042742: defense response to bacterium | 1.23E-03 |
57 | GO:0006808: regulation of nitrogen utilization | 1.27E-03 |
58 | GO:0006183: GTP biosynthetic process | 1.27E-03 |
59 | GO:0044206: UMP salvage | 1.27E-03 |
60 | GO:0000413: protein peptidyl-prolyl isomerization | 1.29E-03 |
61 | GO:0042335: cuticle development | 1.29E-03 |
62 | GO:0043097: pyrimidine nucleoside salvage | 1.61E-03 |
63 | GO:0032543: mitochondrial translation | 1.61E-03 |
64 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.61E-03 |
65 | GO:0031365: N-terminal protein amino acid modification | 1.61E-03 |
66 | GO:0042549: photosystem II stabilization | 1.98E-03 |
67 | GO:0006206: pyrimidine nucleobase metabolic process | 1.98E-03 |
68 | GO:0032973: amino acid export | 1.98E-03 |
69 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.38E-03 |
70 | GO:0010189: vitamin E biosynthetic process | 2.38E-03 |
71 | GO:0009854: oxidative photosynthetic carbon pathway | 2.38E-03 |
72 | GO:0006400: tRNA modification | 2.80E-03 |
73 | GO:0009610: response to symbiotic fungus | 2.80E-03 |
74 | GO:0009772: photosynthetic electron transport in photosystem II | 2.80E-03 |
75 | GO:0043090: amino acid import | 2.80E-03 |
76 | GO:0030497: fatty acid elongation | 2.80E-03 |
77 | GO:0010196: nonphotochemical quenching | 2.80E-03 |
78 | GO:0010411: xyloglucan metabolic process | 2.89E-03 |
79 | GO:0009817: defense response to fungus, incompatible interaction | 3.20E-03 |
80 | GO:0032508: DNA duplex unwinding | 3.24E-03 |
81 | GO:2000070: regulation of response to water deprivation | 3.24E-03 |
82 | GO:0046620: regulation of organ growth | 3.24E-03 |
83 | GO:0010119: regulation of stomatal movement | 3.70E-03 |
84 | GO:0006526: arginine biosynthetic process | 3.71E-03 |
85 | GO:0009932: cell tip growth | 3.71E-03 |
86 | GO:0071482: cellular response to light stimulus | 3.71E-03 |
87 | GO:0015996: chlorophyll catabolic process | 3.71E-03 |
88 | GO:0007186: G-protein coupled receptor signaling pathway | 3.71E-03 |
89 | GO:0019430: removal of superoxide radicals | 3.71E-03 |
90 | GO:0009051: pentose-phosphate shunt, oxidative branch | 4.20E-03 |
91 | GO:0080144: amino acid homeostasis | 4.20E-03 |
92 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.71E-03 |
93 | GO:0043069: negative regulation of programmed cell death | 5.24E-03 |
94 | GO:0048829: root cap development | 5.24E-03 |
95 | GO:0045036: protein targeting to chloroplast | 5.24E-03 |
96 | GO:0042546: cell wall biogenesis | 5.42E-03 |
97 | GO:0006352: DNA-templated transcription, initiation | 5.79E-03 |
98 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.79E-03 |
99 | GO:0000038: very long-chain fatty acid metabolic process | 5.79E-03 |
100 | GO:0009773: photosynthetic electron transport in photosystem I | 5.79E-03 |
101 | GO:0019684: photosynthesis, light reaction | 5.79E-03 |
102 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.79E-03 |
103 | GO:0009073: aromatic amino acid family biosynthetic process | 5.79E-03 |
104 | GO:0006790: sulfur compound metabolic process | 6.35E-03 |
105 | GO:0045037: protein import into chloroplast stroma | 6.35E-03 |
106 | GO:0006094: gluconeogenesis | 6.94E-03 |
107 | GO:0055114: oxidation-reduction process | 6.97E-03 |
108 | GO:0010143: cutin biosynthetic process | 7.55E-03 |
109 | GO:0046854: phosphatidylinositol phosphorylation | 8.18E-03 |
110 | GO:0006096: glycolytic process | 8.30E-03 |
111 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.82E-03 |
112 | GO:0006071: glycerol metabolic process | 8.82E-03 |
113 | GO:0006833: water transport | 8.82E-03 |
114 | GO:0010025: wax biosynthetic process | 8.82E-03 |
115 | GO:0005992: trehalose biosynthetic process | 9.48E-03 |
116 | GO:0009116: nucleoside metabolic process | 9.48E-03 |
117 | GO:0000027: ribosomal large subunit assembly | 9.48E-03 |
118 | GO:0010026: trichome differentiation | 1.02E-02 |
119 | GO:0003333: amino acid transmembrane transport | 1.09E-02 |
120 | GO:0061077: chaperone-mediated protein folding | 1.09E-02 |
121 | GO:0006284: base-excision repair | 1.31E-02 |
122 | GO:0080022: primary root development | 1.46E-02 |
123 | GO:0034220: ion transmembrane transport | 1.46E-02 |
124 | GO:0009790: embryo development | 1.47E-02 |
125 | GO:0006662: glycerol ether metabolic process | 1.54E-02 |
126 | GO:0010182: sugar mediated signaling pathway | 1.54E-02 |
127 | GO:0006520: cellular amino acid metabolic process | 1.54E-02 |
128 | GO:0007018: microtubule-based movement | 1.62E-02 |
129 | GO:0071555: cell wall organization | 1.64E-02 |
130 | GO:0009734: auxin-activated signaling pathway | 1.72E-02 |
131 | GO:0009451: RNA modification | 1.78E-02 |
132 | GO:0002229: defense response to oomycetes | 1.79E-02 |
133 | GO:0032502: developmental process | 1.87E-02 |
134 | GO:0009793: embryo development ending in seed dormancy | 1.96E-02 |
135 | GO:0030163: protein catabolic process | 1.96E-02 |
136 | GO:0009627: systemic acquired resistance | 2.51E-02 |
137 | GO:0009631: cold acclimation | 3.11E-02 |
138 | GO:0006508: proteolysis | 3.15E-02 |
139 | GO:0006865: amino acid transport | 3.22E-02 |
140 | GO:0009637: response to blue light | 3.32E-02 |
141 | GO:0009853: photorespiration | 3.32E-02 |
142 | GO:0045087: innate immune response | 3.32E-02 |
143 | GO:0034599: cellular response to oxidative stress | 3.43E-02 |
144 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.44E-02 |
145 | GO:0006839: mitochondrial transport | 3.65E-02 |
146 | GO:0030001: metal ion transport | 3.65E-02 |
147 | GO:0006631: fatty acid metabolic process | 3.76E-02 |
148 | GO:0042542: response to hydrogen peroxide | 3.87E-02 |
149 | GO:0010114: response to red light | 3.98E-02 |
150 | GO:0009926: auxin polar transport | 3.98E-02 |
151 | GO:0006869: lipid transport | 4.36E-02 |
152 | GO:0016042: lipid catabolic process | 4.76E-02 |
153 | GO:0006281: DNA repair | 4.89E-02 |
154 | GO:0009585: red, far-red light phototransduction | 4.92E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
2 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
4 | GO:0008887: glycerate kinase activity | 0.00E+00 |
5 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
6 | GO:0019843: rRNA binding | 1.65E-15 |
7 | GO:0003735: structural constituent of ribosome | 1.86E-14 |
8 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.95E-06 |
9 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 5.87E-06 |
10 | GO:0004089: carbonate dehydratase activity | 1.74E-05 |
11 | GO:0005528: FK506 binding | 3.69E-05 |
12 | GO:0051920: peroxiredoxin activity | 8.36E-05 |
13 | GO:0016209: antioxidant activity | 1.43E-04 |
14 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.82E-04 |
15 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.82E-04 |
16 | GO:0004807: triose-phosphate isomerase activity | 1.82E-04 |
17 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.82E-04 |
18 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.82E-04 |
19 | GO:0008047: enzyme activator activity | 3.05E-04 |
20 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 4.10E-04 |
21 | GO:0042389: omega-3 fatty acid desaturase activity | 4.10E-04 |
22 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 4.10E-04 |
23 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.10E-04 |
24 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 4.10E-04 |
25 | GO:0008266: poly(U) RNA binding | 5.21E-04 |
26 | GO:0004075: biotin carboxylase activity | 6.69E-04 |
27 | GO:0017150: tRNA dihydrouridine synthase activity | 6.69E-04 |
28 | GO:0050734: hydroxycinnamoyltransferase activity | 6.69E-04 |
29 | GO:0004148: dihydrolipoyl dehydrogenase activity | 6.69E-04 |
30 | GO:0004550: nucleoside diphosphate kinase activity | 9.55E-04 |
31 | GO:0043023: ribosomal large subunit binding | 9.55E-04 |
32 | GO:0008097: 5S rRNA binding | 9.55E-04 |
33 | GO:0004659: prenyltransferase activity | 1.27E-03 |
34 | GO:0001053: plastid sigma factor activity | 1.27E-03 |
35 | GO:0004845: uracil phosphoribosyltransferase activity | 1.27E-03 |
36 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.27E-03 |
37 | GO:0016836: hydro-lyase activity | 1.27E-03 |
38 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.27E-03 |
39 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.27E-03 |
40 | GO:0016987: sigma factor activity | 1.27E-03 |
41 | GO:0010328: auxin influx transmembrane transporter activity | 1.27E-03 |
42 | GO:0052793: pectin acetylesterase activity | 1.27E-03 |
43 | GO:0004791: thioredoxin-disulfide reductase activity | 1.49E-03 |
44 | GO:0003989: acetyl-CoA carboxylase activity | 1.61E-03 |
45 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.61E-03 |
46 | GO:0009922: fatty acid elongase activity | 1.61E-03 |
47 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.61E-03 |
48 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.71E-03 |
49 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.94E-03 |
50 | GO:0016208: AMP binding | 1.98E-03 |
51 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.38E-03 |
52 | GO:0004849: uridine kinase activity | 2.38E-03 |
53 | GO:0003729: mRNA binding | 2.71E-03 |
54 | GO:0008235: metalloexopeptidase activity | 2.80E-03 |
55 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.89E-03 |
56 | GO:0008236: serine-type peptidase activity | 3.04E-03 |
57 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.71E-03 |
58 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 4.20E-03 |
59 | GO:0050661: NADP binding | 4.61E-03 |
60 | GO:0004805: trehalose-phosphatase activity | 5.24E-03 |
61 | GO:0004177: aminopeptidase activity | 5.79E-03 |
62 | GO:0051287: NAD binding | 6.31E-03 |
63 | GO:0052689: carboxylic ester hydrolase activity | 7.69E-03 |
64 | GO:0003777: microtubule motor activity | 7.77E-03 |
65 | GO:0015171: amino acid transmembrane transporter activity | 7.77E-03 |
66 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 8.82E-03 |
67 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 8.82E-03 |
68 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 8.82E-03 |
69 | GO:0003723: RNA binding | 1.11E-02 |
70 | GO:0003727: single-stranded RNA binding | 1.31E-02 |
71 | GO:0047134: protein-disulfide reductase activity | 1.38E-02 |
72 | GO:0004252: serine-type endopeptidase activity | 1.39E-02 |
73 | GO:0008080: N-acetyltransferase activity | 1.54E-02 |
74 | GO:0050662: coenzyme binding | 1.62E-02 |
75 | GO:0008017: microtubule binding | 1.82E-02 |
76 | GO:0005200: structural constituent of cytoskeleton | 2.14E-02 |
77 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.14E-02 |
78 | GO:0042802: identical protein binding | 2.21E-02 |
79 | GO:0015250: water channel activity | 2.32E-02 |
80 | GO:0004601: peroxidase activity | 2.69E-02 |
81 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.71E-02 |
82 | GO:0016788: hydrolase activity, acting on ester bonds | 2.74E-02 |
83 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.81E-02 |
84 | GO:0016740: transferase activity | 2.95E-02 |
85 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.25E-02 |
86 | GO:0003993: acid phosphatase activity | 3.43E-02 |
87 | GO:0005507: copper ion binding | 3.57E-02 |
88 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.65E-02 |
89 | GO:0042803: protein homodimerization activity | 4.17E-02 |
90 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.21E-02 |
91 | GO:0005525: GTP binding | 4.26E-02 |
92 | GO:0015293: symporter activity | 4.32E-02 |
93 | GO:0005198: structural molecule activity | 4.32E-02 |
94 | GO:0003924: GTPase activity | 4.89E-02 |
95 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.92E-02 |
96 | GO:0005509: calcium ion binding | 4.97E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0044391: ribosomal subunit | 0.00E+00 |
2 | GO:0009570: chloroplast stroma | 2.90E-52 |
3 | GO:0009507: chloroplast | 7.26E-50 |
4 | GO:0009941: chloroplast envelope | 1.81E-36 |
5 | GO:0009579: thylakoid | 1.44E-23 |
6 | GO:0031977: thylakoid lumen | 1.74E-14 |
7 | GO:0009535: chloroplast thylakoid membrane | 5.22E-14 |
8 | GO:0009543: chloroplast thylakoid lumen | 7.16E-14 |
9 | GO:0005840: ribosome | 3.58E-13 |
10 | GO:0009534: chloroplast thylakoid | 1.21E-06 |
11 | GO:0010319: stromule | 1.09E-05 |
12 | GO:0000311: plastid large ribosomal subunit | 1.40E-05 |
13 | GO:0048046: apoplast | 4.30E-05 |
14 | GO:0009654: photosystem II oxygen evolving complex | 4.33E-05 |
15 | GO:0019898: extrinsic component of membrane | 1.33E-04 |
16 | GO:0009547: plastid ribosome | 1.82E-04 |
17 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.82E-04 |
18 | GO:0016020: membrane | 2.47E-04 |
19 | GO:0042170: plastid membrane | 4.10E-04 |
20 | GO:0009536: plastid | 5.05E-04 |
21 | GO:0030095: chloroplast photosystem II | 5.21E-04 |
22 | GO:0009528: plastid inner membrane | 6.69E-04 |
23 | GO:0042651: thylakoid membrane | 7.90E-04 |
24 | GO:0009532: plastid stroma | 8.65E-04 |
25 | GO:0009527: plastid outer membrane | 1.27E-03 |
26 | GO:0009706: chloroplast inner membrane | 1.48E-03 |
27 | GO:0009533: chloroplast stromal thylakoid | 2.80E-03 |
28 | GO:0031225: anchored component of membrane | 2.91E-03 |
29 | GO:0009707: chloroplast outer membrane | 3.20E-03 |
30 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.20E-03 |
31 | GO:0045298: tubulin complex | 4.20E-03 |
32 | GO:0046658: anchored component of plasma membrane | 4.23E-03 |
33 | GO:0022626: cytosolic ribosome | 5.29E-03 |
34 | GO:0032040: small-subunit processome | 6.35E-03 |
35 | GO:0005874: microtubule | 6.49E-03 |
36 | GO:0031969: chloroplast membrane | 6.77E-03 |
37 | GO:0009505: plant-type cell wall | 6.81E-03 |
38 | GO:0000312: plastid small ribosomal subunit | 7.55E-03 |
39 | GO:0015935: small ribosomal subunit | 1.09E-02 |
40 | GO:0005871: kinesin complex | 1.38E-02 |
41 | GO:0005618: cell wall | 1.82E-02 |
42 | GO:0005778: peroxisomal membrane | 2.14E-02 |
43 | GO:0030529: intracellular ribonucleoprotein complex | 2.32E-02 |
44 | GO:0015934: large ribosomal subunit | 3.11E-02 |
45 | GO:0022625: cytosolic large ribosomal subunit | 3.50E-02 |
46 | GO:0005819: spindle | 3.54E-02 |